RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 DDX11Q96FC9 970 aa24.32■■□□□ 1.48
PCSK6-217ENST00000618548 DISP1Q96F81 1524 aa24.32■■□□□ 1.48
PCSK6-217ENST00000618548 CEP85Q6P2H3 762 aa24.32■■□□□ 1.48
PCSK6-217ENST00000618548 PDILTQ8N807 584 aa24.32■■□□□ 1.48
PCSK6-217ENST00000618548 MYRIPQ8NFW9 859 aa24.31■■□□□ 1.48
PCSK6-217ENST00000618548 RTEL1-TNFRSF6BF6WH68 1400 aa24.31■■□□□ 1.48
PCSK6-217ENST00000618548 GPT2Q8TD30 523 aa24.3■■□□□ 1.48
PCSK6-217ENST00000618548 WDR7Q9Y4E6 1490 aa24.3■■□□□ 1.48
PCSK6-217ENST00000618548 RAB11FIP3O75154 756 aa24.3■■□□□ 1.48
PCSK6-217ENST00000618548 ZNF165P49910 485 aa24.3■■□□□ 1.48
PCSK6-217ENST00000618548 ANKRD1Q15327 319 aa24.3■■□□□ 1.48
PCSK6-217ENST00000618548 CCDC34Q96HJ3 373 aa24.3■■□□□ 1.48
PCSK6-217ENST00000618548 SLC52A1Q9NWF4 448 aa24.3■■□□□ 1.48
PCSK6-217ENST00000618548 GSPT1P15170 499 aaKnown RBP24.3■■□□□ 1.48
PCSK6-217ENST00000618548 DNM1Q05193 864 aaKnown RBP24.3■■□□□ 1.48
PCSK6-217ENST00000618548 TAF3Q5VWG9 929 aa24.29■■□□□ 1.48
PCSK6-217ENST00000618548 CHMP4CQ96CF2 233 aa24.29■■□□□ 1.48
PCSK6-217ENST00000618548 SCAND2PQ9GZW5 306 aaPredicted RBP24.29■■□□□ 1.48
PCSK6-217ENST00000618548 SIL1Q9H173 461 aa24.29■■□□□ 1.48
PCSK6-217ENST00000618548 GADD45BO75293 160 aaPredicted RBP24.29■■□□□ 1.48
PCSK6-217ENST00000618548 KIF1BPQ96EK5 621 aa24.29■■□□□ 1.48
PCSK6-217ENST00000618548 PTPRCP08575 1304 aa24.29■■□□□ 1.48
PCSK6-217ENST00000618548 TOMM22Q9NS69 142 aa24.28■■□□□ 1.48
PCSK6-217ENST00000618548 KDM4AO75164 1064 aa24.28■■□□□ 1.48
PCSK6-217ENST00000618548 NLRP6P59044 892 aa24.28■■□□□ 1.48
PCSK6-217ENST00000618548 C1orf141Q5JVX7 400 aa24.28■■□□□ 1.48
PCSK6-217ENST00000618548 AACSQ86V21 672 aa24.28■■□□□ 1.48
PCSK6-217ENST00000618548 KIF18AQ8NI77 898 aa24.28■■□□□ 1.48
PCSK6-217ENST00000618548 PIBF1Q8WXW3 757 aa24.28■■□□□ 1.48
PCSK6-217ENST00000618548 NECAB1Q8N987 351 aa24.27■■□□□ 1.48
PCSK6-217ENST00000618548 DTNBO60941 627 aa24.27■■□□□ 1.48
PCSK6-217ENST00000618548 ANAPC15P60006 121 aa24.27■■□□□ 1.48
PCSK6-217ENST00000618548 GTPBP4Q9BZE4 634 aaKnown RBP24.27■■□□□ 1.48
PCSK6-217ENST00000618548 HIP1O00291 1037 aa24.26■■□□□ 1.47
PCSK6-217ENST00000618548 PES1O00541 588 aaKnown RBP24.26■■□□□ 1.47
PCSK6-217ENST00000618548 CEP57L1Q8IYX8 460 aa24.26■■□□□ 1.47
PCSK6-217ENST00000618548 DNAJC2Q99543 621 aaKnown RBP24.26■■□□□ 1.47
PCSK6-217ENST00000618548 SH2B1Q9NRF2 756 aaPredicted RBP24.26■■□□□ 1.47
PCSK6-217ENST00000618548 DUOX2Q9NRD8 1548 aa24.26■■□□□ 1.47
PCSK6-217ENST00000618548 IDI1Q13907 227 aa24.26■■□□□ 1.47
PCSK6-217ENST00000618548 STK38Q15208 465 aa24.26■■□□□ 1.47
PCSK6-217ENST00000618548 NEUROD6Q96NK8 337 aa24.26■■□□□ 1.47
PCSK6-217ENST00000618548 POLKQ9UBT6 870 aa24.26■■□□□ 1.47
PCSK6-217ENST00000618548 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.26■■□□□ 1.47
PCSK6-217ENST00000618548 CFAP45Q9UL16 551 aa24.26■■□□□ 1.47
PCSK6-217ENST00000618548 V9GYY5 206 aaPredicted RBP24.26■■□□□ 1.47
PCSK6-217ENST00000618548 DDX58O95786 925 aaKnown RBP24.26■■□□□ 1.47
PCSK6-217ENST00000618548 PTGS1P23219 599 aa24.26■■□□□ 1.47
PCSK6-217ENST00000618548 TAF7LQ5H9L4 462 aa24.26■■□□□ 1.47
PCSK6-217ENST00000618548 GLRX3O76003 335 aaKnown RBP24.25■■□□□ 1.47
PCSK6-217ENST00000618548 INTS4Q96HW7 963 aaKnown RBP24.25■■□□□ 1.47
PCSK6-217ENST00000618548 UBXN4Q92575 508 aa24.25■■□□□ 1.47
PCSK6-217ENST00000618548 ABCC2Q92887 1545 aa24.25■■□□□ 1.47
PCSK6-217ENST00000618548 FLIIQ13045 1269 aa24.24■■□□□ 1.47
PCSK6-217ENST00000618548 FAM200AQ8TCP9 573 aa24.24■■□□□ 1.47
PCSK6-217ENST00000618548 F13A1P00488 732 aa24.24■■□□□ 1.47
PCSK6-217ENST00000618548 U2AF2P26368 475 aaKnown RBP eCLIP24.24■■□□□ 1.472e-6■■■□□ 14.8
PCSK6-217ENST00000618548 ZNF396Q96N95 335 aaPredicted RBP24.24■■□□□ 1.47
PCSK6-217ENST00000618548 CCDC61Q9Y6R9 512 aa24.24■■□□□ 1.47
PCSK6-217ENST00000618548 RAPGEF3O95398 923 aa24.24■■□□□ 1.47
PCSK6-217ENST00000618548 CPLX2Q6PUV4 134 aaKnown RBP24.23■■□□□ 1.47
PCSK6-217ENST00000618548 RIC3Q7Z5B4 369 aa24.23■■□□□ 1.47
PCSK6-217ENST00000618548 NUDT16Q96DE0 195 aaKnown RBP24.23■■□□□ 1.47
PCSK6-217ENST00000618548 KIF21AQ7Z4S6 1674 aa24.23■■□□□ 1.47
PCSK6-217ENST00000618548 RIOK3O14730 519 aaKnown RBP24.23■■□□□ 1.47
PCSK6-217ENST00000618548 ZNF692Q9BU19 519 aaPredicted RBP24.23■■□□□ 1.47
PCSK6-217ENST00000618548 ANO6Q4KMQ2 910 aa24.22■■□□□ 1.47
PCSK6-217ENST00000618548 CEP135Q66GS9 1140 aa24.22■■□□□ 1.47
PCSK6-217ENST00000618548 SERPINC1P01008 464 aa24.22■■□□□ 1.47
PCSK6-217ENST00000618548 TCEANC2Q96MN5 208 aa24.22■■□□□ 1.47
PCSK6-217ENST00000618548 ERC1Q8IUD2 1116 aa24.21■■□□□ 1.47
PCSK6-217ENST00000618548 DACT1Q9NYF0 836 aa24.21■■□□□ 1.47
PCSK6-217ENST00000618548 BBXQ8WY36 941 aaPredicted RBP24.21■■□□□ 1.47
PCSK6-217ENST00000618548 DDX19AQ9NUU7 478 aaKnown RBP24.21■■□□□ 1.47
PCSK6-217ENST00000618548 ADAMTS12P58397 1594 aa24.21■■□□□ 1.47
PCSK6-217ENST00000618548 CSB-PGBD3P0DP91 1061 aa24.21■■□□□ 1.47
PCSK6-217ENST00000618548 SYT1P21579 422 aa24.21■■□□□ 1.47
PCSK6-217ENST00000618548 CHMLP26374 656 aa24.2■■□□□ 1.46
PCSK6-217ENST00000618548 HSP90B2PQ58FF3 399 aa24.2■■□□□ 1.46
PCSK6-217ENST00000618548 PTPRTO14522 1441 aa24.2■■□□□ 1.46
PCSK6-217ENST00000618548 TRAPPC8Q9Y2L5 1435 aa24.2■■□□□ 1.46
PCSK6-217ENST00000618548 POLR3GO15318 223 aaPredicted RBP24.19■■□□□ 1.46
PCSK6-217ENST00000618548 OLFM4Q6UX06 510 aa24.19■■□□□ 1.46
PCSK6-217ENST00000618548 PAXBP1Q9Y5B6 917 aa24.19■■□□□ 1.46
PCSK6-217ENST00000618548 TPM1P09493 284 aa24.19■■□□□ 1.46
PCSK6-217ENST00000618548 AK2P54819 239 aa24.19■■□□□ 1.46
PCSK6-217ENST00000618548 TTLL5Q6EMB2 1281 aa24.19■■□□□ 1.46
PCSK6-217ENST00000618548 CWC15Q9P013 229 aaKnown RBP24.19■■□□□ 1.46
PCSK6-217ENST00000618548 BRD1O95696 1058 aa24.18■■□□□ 1.46
PCSK6-217ENST00000618548 SFPQP23246 707 aaKnown RBP eCLIP24.18■■□□□ 1.462e-6■■■□□ 17.5
PCSK6-217ENST00000618548 TRIM29Q14134 588 aa24.18■■□□□ 1.46
PCSK6-217ENST00000618548 PPP1R42Q7Z4L9 355 aa24.18■■□□□ 1.46
PCSK6-217ENST00000618548 LUZP1Q86V48 1076 aa24.18■■□□□ 1.46
PCSK6-217ENST00000618548 A0A1W2PP64 1363 aa24.18■■□□□ 1.46
PCSK6-217ENST00000618548 CPA1P15085 419 aa24.18■■□□□ 1.46
PCSK6-217ENST00000618548 TMCO3Q6UWJ1 677 aa24.18■■□□□ 1.46
PCSK6-217ENST00000618548 BOLA2Q9H3K6 86 aa24.18■■□□□ 1.46
PCSK6-217ENST00000618548 EID1Q9Y6B2 187 aa24.18■■□□□ 1.46
PCSK6-217ENST00000618548 BCL2L12Q9HB09 334 aa24.18■■□□□ 1.46
PCSK6-217ENST00000618548 ZRANB1Q9UGI0 708 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms