RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 LGR6Q9HBX8 967 aa20.67■□□□□ 0.9
RPP40-207ENST00000618533 CEMIPQ8WUJ3 1361 aa20.67■□□□□ 0.9
RPP40-207ENST00000618533 RTF1Q92541 710 aaKnown RBP20.66■□□□□ 0.9
RPP40-207ENST00000618533 ATG3Q9NT62 314 aa20.66■□□□□ 0.9
RPP40-207ENST00000618533 LRRC4BQ9NT99 713 aa20.66■□□□□ 0.9
RPP40-207ENST00000618533 STK32BQ9NY57 414 aa20.66■□□□□ 0.9
RPP40-207ENST00000618533 QSER1Q2KHR3 1735 aa20.66■□□□□ 0.9
RPP40-207ENST00000618533 NFE2L2Q16236 605 aa20.65■□□□□ 0.9
RPP40-207ENST00000618533 ASAP1Q9ULH1 1129 aa20.65■□□□□ 0.9
RPP40-207ENST00000618533 CICQ96RK0 1608 aaPredicted RBP20.64■□□□□ 0.9
RPP40-207ENST00000618533 LOC102724428A0A0B4J2F2 783 aa20.64■□□□□ 0.89
RPP40-207ENST00000618533 SIK1P57059 783 aa20.64■□□□□ 0.89
RPP40-207ENST00000618533 TEFQ10587 303 aa20.64■□□□□ 0.89
RPP40-207ENST00000618533 IL17REQ8NFR9 667 aa20.64■□□□□ 0.89
RPP40-207ENST00000618533 R3HDM1Q15032 1099 aaKnown RBP20.63■□□□□ 0.89
RPP40-207ENST00000618533 SLC15A2Q16348 729 aa20.63■□□□□ 0.89
RPP40-207ENST00000618533 RUNDC1Q96C34 613 aa20.63■□□□□ 0.89
RPP40-207ENST00000618533 ADAMTS8Q9UP79 889 aa20.63■□□□□ 0.89
RPP40-207ENST00000618533 ANO8Q9HCE9 1232 aaPredicted RBP20.62■□□□□ 0.89
RPP40-207ENST00000618533 UBR2Q8IWV8 1755 aa20.62■□□□□ 0.89
RPP40-207ENST00000618533 MRS2Q9HD23 443 aa20.61■□□□□ 0.89
RPP40-207ENST00000618533 PSDA5PKW4 1024 aaPredicted RBP20.6■□□□□ 0.89
RPP40-207ENST00000618533 LMOD3Q0VAK6 560 aa20.6■□□□□ 0.89
RPP40-207ENST00000618533 C4BP0C0L5 1744 aa20.6■□□□□ 0.89
RPP40-207ENST00000618533 ATP6V1AP38606 617 aa20.59■□□□□ 0.89
RPP40-207ENST00000618533 AKT1S1Q96B36 256 aa20.59■□□□□ 0.89
RPP40-207ENST00000618533 CASZ1Q86V15 1759 aa20.59■□□□□ 0.89
RPP40-207ENST00000618533 COL5A3P25940 1745 aaPredicted RBP20.58■□□□□ 0.89
RPP40-207ENST00000618533 TMPOP42166 694 aaKnown RBP20.57■□□□□ 0.88
RPP40-207ENST00000618533 KCNQ4P56696 695 aa20.57■□□□□ 0.88
RPP40-207ENST00000618533 CCDC184Q52MB2 194 aa20.57■□□□□ 0.88
RPP40-207ENST00000618533 TTC5Q8N0Z6 440 aa20.57■□□□□ 0.88
RPP40-207ENST00000618533 PNISRQ8TF01 805 aaKnown RBP20.57■□□□□ 0.88
RPP40-207ENST00000618533 RBM42Q9BTD8 480 aaKnown RBP20.57■□□□□ 0.88
RPP40-207ENST00000618533 TUBGCP6Q96RT7 1819 aa20.57■□□□□ 0.88
RPP40-207ENST00000618533 RIPK4P57078 832 aa20.56■□□□□ 0.88
RPP40-207ENST00000618533 ZNF827Q17R98 1081 aa20.56■□□□□ 0.88
RPP40-207ENST00000618533 MCM10Q7L590 875 aa20.56■□□□□ 0.88
RPP40-207ENST00000618533 CCDC146Q8IYE0 955 aa20.56■□□□□ 0.88
RPP40-207ENST00000618533 KCPQ6ZWJ8 1503 aa20.56■□□□□ 0.88
RPP40-207ENST00000618533 VSIG10Q8N0Z9 540 aa20.55■□□□□ 0.88
RPP40-207ENST00000618533 TJP1Q07157 1748 aa20.55■□□□□ 0.88
RPP40-207ENST00000618533 UBR3Q6ZT12 1888 aa20.54■□□□□ 0.88
RPP40-207ENST00000618533 LRP5O75197 1615 aa20.54■□□□□ 0.88
RPP40-207ENST00000618533 BTBD11A6QL63 1104 aa20.54■□□□□ 0.88
RPP40-207ENST00000618533 PTCD1O75127 700 aaKnown RBP20.54■□□□□ 0.88
RPP40-207ENST00000618533 ZNF790Q6PG37 636 aa20.54■□□□□ 0.88
RPP40-207ENST00000618533 FLAD1Q8NFF5 587 aa20.54■□□□□ 0.88
RPP40-207ENST00000618533 TFCP2L1Q9NZI6 479 aa20.54■□□□□ 0.88
RPP40-207ENST00000618533 SLC39A6Q13433 755 aa20.53■□□□□ 0.88
RPP40-207ENST00000618533 ITPK1Q13572 414 aa20.53■□□□□ 0.88
RPP40-207ENST00000618533 DCTN1Q14203 1278 aa20.53■□□□□ 0.88
RPP40-207ENST00000618533 TAF7Q15545 349 aaPredicted RBP20.53■□□□□ 0.88
RPP40-207ENST00000618533 AK7Q96M32 723 aa20.53■□□□□ 0.88
RPP40-207ENST00000618533 SLC4A9Q96Q91 983 aa20.53■□□□□ 0.88
RPP40-207ENST00000618533 RC3H1Q5TC82 1133 aaKnown RBP20.52■□□□□ 0.88
RPP40-207ENST00000618533 LINC00116Q8NCU8 138 aa20.52■□□□□ 0.88
RPP40-207ENST00000618533 CNTNAP4Q9C0A0 1308 aa20.52■□□□□ 0.87
RPP40-207ENST00000618533 KDM3BQ7LBC6 1761 aa20.51■□□□□ 0.87
RPP40-207ENST00000618533 SLC16A10Q8TF71 515 aa20.51■□□□□ 0.87
RPP40-207ENST00000618533 FMNL2Q96PY5 1086 aa20.5■□□□□ 0.87
RPP40-207ENST00000618533 TEX13AQ9BXU3 409 aaPredicted RBP20.5■□□□□ 0.87
RPP40-207ENST00000618533 BABAM1Q9NWV8 329 aa20.5■□□□□ 0.87
RPP40-207ENST00000618533 PNPLA7Q6ZV29 1317 aa20.5■□□□□ 0.87
RPP40-207ENST00000618533 HEG1Q9ULI3 1381 aa20.49■□□□□ 0.87
RPP40-207ENST00000618533 MYH14Q7Z406 1995 aaKnown RBP20.49■□□□□ 0.87
RPP40-207ENST00000618533 SSFA2P28290 1259 aa20.49■□□□□ 0.87
RPP40-207ENST00000618533 CCER2I3L3R5 266 aa20.48■□□□□ 0.87
RPP40-207ENST00000618533 NCBP3Q53F19 620 aaKnown RBP20.48■□□□□ 0.87
RPP40-207ENST00000618533 ZNF496Q96IT1 587 aaPredicted RBP20.48■□□□□ 0.87
RPP40-207ENST00000618533 APAF1O14727 1248 aa20.47■□□□□ 0.87
RPP40-207ENST00000618533 NEUROD2Q15784 382 aa20.47■□□□□ 0.87
RPP40-207ENST00000618533 DIEXFQ68CQ4 756 aaKnown RBP20.47■□□□□ 0.87
RPP40-207ENST00000618533 MTFR1LQ9H019 292 aa20.47■□□□□ 0.87
RPP40-207ENST00000618533 RRP7AQ9Y3A4 280 aaKnown RBP20.47■□□□□ 0.87
RPP40-207ENST00000618533 GNPATO15228 680 aa20.46■□□□□ 0.87
RPP40-207ENST00000618533 ADRA2BP18089 450 aa20.46■□□□□ 0.87
RPP40-207ENST00000618533 SPON1Q9HCB6 807 aa20.46■□□□□ 0.87
RPP40-207ENST00000618533 TRIM35Q9UPQ4 493 aa20.46■□□□□ 0.87
RPP40-207ENST00000618533 RTCBQ9Y3I0 505 aaKnown RBP20.46■□□□□ 0.87
RPP40-207ENST00000618533 COL24A1Q17RW2 1714 aa20.46■□□□□ 0.87
RPP40-207ENST00000618533 STARD3NLO95772 234 aa20.45■□□□□ 0.86
RPP40-207ENST00000618533 CALD1Q05682 793 aaKnown RBP20.45■□□□□ 0.86
RPP40-207ENST00000618533 DNAJC10Q8IXB1 793 aa20.45■□□□□ 0.86
RPP40-207ENST00000618533 THUMPD2Q9BTF0 503 aaKnown RBP20.45■□□□□ 0.86
RPP40-207ENST00000618533 RPS6KA4O75676 772 aa20.44■□□□□ 0.86
RPP40-207ENST00000618533 CRKLP46109 303 aaKnown RBP20.44■□□□□ 0.86
RPP40-207ENST00000618533 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.43■□□□□ 0.86
RPP40-207ENST00000618533 CYP19A1P11511 503 aaPredicted RBP20.43■□□□□ 0.86
RPP40-207ENST00000618533 CCDC27Q2M243 656 aa20.43■□□□□ 0.86
RPP40-207ENST00000618533 COL23A1Q86Y22 540 aaPredicted RBP20.43■□□□□ 0.86
RPP40-207ENST00000618533 PDGFDQ9GZP0 370 aaPredicted RBP20.43■□□□□ 0.86
RPP40-207ENST00000618533 CCDC87Q9NVE4 849 aa20.43■□□□□ 0.86
RPP40-207ENST00000618533 LAMB4A4D0S4 1761 aa20.43■□□□□ 0.86
RPP40-207ENST00000618533 KCNQ3O43525 872 aa20.42■□□□□ 0.86
RPP40-207ENST00000618533 SNRPA1P09661 255 aaKnown RBP20.42■□□□□ 0.86
RPP40-207ENST00000618533 NGEFQ8N5V2 710 aa20.42■□□□□ 0.86
RPP40-207ENST00000618533 TRAPPC3LQ5T215 181 aa20.41■□□□□ 0.86
RPP40-207ENST00000618533 TSPYL4Q9UJ04 414 aa20.41■□□□□ 0.86
RPP40-207ENST00000618533 ZBTB7AO95365 584 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms