RNA–Protein interactions for RNA: ENST00000618515.4

KIF3A-208, Transcript of kinesin family member 3A, humanhuman

TSL 5 BASIC

Gene KIF3A, Length 3,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-208ENST00000618515 MSH6P52701 1360 aa15.92■□□□□ 0.14
KIF3A-208ENST00000618515 FAM208AQ9UK61 1670 aaKnown RBP15.92■□□□□ 0.14
KIF3A-208ENST00000618515 SOS1Q07889 1333 aaPredicted RBP15.92■□□□□ 0.14
KIF3A-208ENST00000618515 SPTLC3Q9NUV7 552 aa15.92■□□□□ 0.14
KIF3A-208ENST00000618515 PDE1AP54750 535 aa15.91■□□□□ 0.14
KIF3A-208ENST00000618515 KIAA2012Q0VF49 1180 aa15.91■□□□□ 0.14
KIF3A-208ENST00000618515 MCCP23508 829 aa15.91■□□□□ 0.14
KIF3A-208ENST00000618515 C16orf71Q8IYS4 520 aaPredicted RBP15.91■□□□□ 0.14
KIF3A-208ENST00000618515 NUTM2DQ5VT03 806 aaPredicted RBP15.9■□□□□ 0.14
KIF3A-208ENST00000618515 SRCIN1Q9C0H9 1055 aa15.9■□□□□ 0.14
KIF3A-208ENST00000618515 CCT4P50991 539 aaKnown RBP15.9■□□□□ 0.14
KIF3A-208ENST00000618515 XPCQ01831 940 aaPredicted RBP15.9■□□□□ 0.14
KIF3A-208ENST00000618515 PIBF1Q8WXW3 757 aa15.9■□□□□ 0.14
KIF3A-208ENST00000618515 ESYT1Q9BSJ8 1104 aa15.9■□□□□ 0.14
KIF3A-208ENST00000618515 RBM27Q9P2N5 1060 aaKnown RBP15.9■□□□□ 0.14
KIF3A-208ENST00000618515 RPAP1Q9BWH6 1393 aaPredicted RBP15.9■□□□□ 0.14
KIF3A-208ENST00000618515 FMN2Q9NZ56 1722 aa15.89■□□□□ 0.14
KIF3A-208ENST00000618515 SYCE3A1L190 88 aa15.89■□□□□ 0.13
KIF3A-208ENST00000618515 NCLP19338 710 aaKnown RBP15.89■□□□□ 0.13
KIF3A-208ENST00000618515 A2ML1A8K2U0 1454 aa15.89■□□□□ 0.13
KIF3A-208ENST00000618515 THUMPD2Q9BTF0 503 aaKnown RBP15.89■□□□□ 0.13
KIF3A-208ENST00000618515 CCDC94Q9BW85 323 aaPredicted RBP15.89■□□□□ 0.13
KIF3A-208ENST00000618515 CHD2O14647 1828 aaKnown RBP15.89■□□□□ 0.13
KIF3A-208ENST00000618515 OTUD7AQ8TE49 926 aaPredicted RBP15.88■□□□□ 0.13
KIF3A-208ENST00000618515 WDR33Q9C0J8 1336 aaKnown RBP15.88■□□□□ 0.13
KIF3A-208ENST00000618515 STK26Q9P289 416 aa15.88■□□□□ 0.13
KIF3A-208ENST00000618515 NSFL1CQ9UNZ2 370 aaKnown RBP15.88■□□□□ 0.13
KIF3A-208ENST00000618515 TPM3P06753 285 aa15.87■□□□□ 0.13
KIF3A-208ENST00000618515 HMOX1P09601 288 aa15.87■□□□□ 0.13
KIF3A-208ENST00000618515 EMILIN1Q9Y6C2 1016 aa15.86■□□□□ 0.13
KIF3A-208ENST00000618515 PEAK1Q9H792 1746 aa15.86■□□□□ 0.13
KIF3A-208ENST00000618515 SAFB2Q14151 953 aaKnown RBP eCLIP15.86■□□□□ 0.13
KIF3A-208ENST00000618515 AEBP2Q6ZN18 517 aaPredicted RBP15.86■□□□□ 0.13
KIF3A-208ENST00000618515 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.86■□□□□ 0.13
KIF3A-208ENST00000618515 OVOS2A0A0J9YW53 1432 aa15.85■□□□□ 0.13
KIF3A-208ENST00000618515 OVOS2Q6IE36 1432 aa15.85■□□□□ 0.13
KIF3A-208ENST00000618515 USP31Q70CQ4 1352 aa15.85■□□□□ 0.13
KIF3A-208ENST00000618515 WASLO00401 505 aaPredicted RBP15.85■□□□□ 0.13
KIF3A-208ENST00000618515 CCDC183Q5T5S1 534 aa15.85■□□□□ 0.13
KIF3A-208ENST00000618515 PDIA4P13667 645 aaKnown RBP15.84■□□□□ 0.13
KIF3A-208ENST00000618515 NEK4P51957 841 aa15.84■□□□□ 0.13
KIF3A-208ENST00000618515 CHMLP26374 656 aa15.84■□□□□ 0.13
KIF3A-208ENST00000618515 USP54Q70EL1 1684 aa15.84■□□□□ 0.13
KIF3A-208ENST00000618515 MEIS3Q99687 375 aa15.84■□□□□ 0.13
KIF3A-208ENST00000618515 FAM13BQ9NYF5 915 aa15.84■□□□□ 0.13
KIF3A-208ENST00000618515 FKBP5Q13451 457 aaPredicted RBP15.83■□□□□ 0.13
KIF3A-208ENST00000618515 COG3Q96JB2 828 aa15.83■□□□□ 0.13
KIF3A-208ENST00000618515 DIP2AQ14689 1571 aa15.83■□□□□ 0.12
KIF3A-208ENST00000618515 HSPA2P54652 639 aa15.83■□□□□ 0.12
KIF3A-208ENST00000618515 RIMS1Q86UR5 1692 aaKnown RBP15.83■□□□□ 0.12
KIF3A-208ENST00000618515 TTC21BQ7Z4L5 1316 aa15.83■□□□□ 0.12
KIF3A-208ENST00000618515 RBM10P98175 930 aaKnown RBP15.83■□□□□ 0.12
KIF3A-208ENST00000618515 MX1P20591 662 aa15.82■□□□□ 0.12
KIF3A-208ENST00000618515 HSPA4P34932 840 aa15.82■□□□□ 0.12
KIF3A-208ENST00000618515 FUCA2Q9BTY2 467 aa15.82■□□□□ 0.12
KIF3A-208ENST00000618515 USP25Q9UHP3 1055 aa15.82■□□□□ 0.12
KIF3A-208ENST00000618515 GNAI2P04899 355 aa15.81■□□□□ 0.12
KIF3A-208ENST00000618515 ATP8B2P98198 1209 aa15.81■□□□□ 0.12
KIF3A-208ENST00000618515 BABAM1Q9NWV8 329 aa15.81■□□□□ 0.12
KIF3A-208ENST00000618515 ELL2O00472 640 aaPredicted RBP15.81■□□□□ 0.12
KIF3A-208ENST00000618515 HTATSF1O43719 755 aaKnown RBP15.81■□□□□ 0.12
KIF3A-208ENST00000618515 SMARCA5O60264 1052 aaPredicted RBP15.81■□□□□ 0.12
KIF3A-208ENST00000618515 DMTNQ08495 405 aa15.81■□□□□ 0.12
KIF3A-208ENST00000618515 NOLC1Q14978 699 aaKnown RBP eCLIP15.81■□□□□ 0.12
KIF3A-208ENST00000618515 KDRP35968 1356 aa15.81■□□□□ 0.12
KIF3A-208ENST00000618515 TCHHQ07283 1943 aa15.8■□□□□ 0.12
KIF3A-208ENST00000618515 GNAI3P08754 354 aa15.8■□□□□ 0.12
KIF3A-208ENST00000618515 UBE2HP62256 183 aa15.8■□□□□ 0.12
KIF3A-208ENST00000618515 SYCP1Q15431 976 aa15.8■□□□□ 0.12
KIF3A-208ENST00000618515 LRRCC1Q9C099 1032 aa15.8■□□□□ 0.12
KIF3A-208ENST00000618515 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.8■□□□□ 0.12
KIF3A-208ENST00000618515 FER1L4A9Z1Z3 1794 aa15.8■□□□□ 0.12
KIF3A-208ENST00000618515 USP48Q86UV5 1035 aa15.79■□□□□ 0.12
KIF3A-208ENST00000618515 NME9Q86XW9 330 aa15.79■□□□□ 0.12
KIF3A-208ENST00000618515 GTPBP4Q9BZE4 634 aaKnown RBP15.79■□□□□ 0.12
KIF3A-208ENST00000618515 TNRQ92752 1358 aa15.79■□□□□ 0.12
KIF3A-208ENST00000618515 FAM83GA6ND36 823 aa15.79■□□□□ 0.12
KIF3A-208ENST00000618515 TTC14Q96N46 770 aa15.79■□□□□ 0.12
KIF3A-208ENST00000618515 ATP6V1DQ9Y5K8 247 aa15.78■□□□□ 0.12
KIF3A-208ENST00000618515 CCDC61Q9Y6R9 512 aa15.78■□□□□ 0.12
KIF3A-208ENST00000618515 USP42Q9H9J4 1324 aaKnown RBP15.78■□□□□ 0.12
KIF3A-208ENST00000618515 KDM4AO75164 1064 aa15.78■□□□□ 0.12
KIF3A-208ENST00000618515 EIF4A2Q14240 407 aaKnown RBP15.78■□□□□ 0.12
KIF3A-208ENST00000618515 KCNB2Q92953 911 aa15.78■□□□□ 0.12
KIF3A-208ENST00000618515 RAB11FIP3O75154 756 aa15.77■□□□□ 0.12
KIF3A-208ENST00000618515 PALD1Q9ULE6 856 aa15.77■□□□□ 0.12
KIF3A-208ENST00000618515 CCDC171Q6TFL3 1326 aa15.77■□□□□ 0.11
KIF3A-208ENST00000618515 ZSCAN22P10073 491 aaPredicted RBP15.76■□□□□ 0.11
KIF3A-208ENST00000618515 ZNF710Q8N1W2 664 aa15.76■□□□□ 0.11
KIF3A-208ENST00000618515 ADGRL3Q9HAR2 1447 aa15.76■□□□□ 0.11
KIF3A-208ENST00000618515 PTMAP06454 111 aaKnown RBP15.76■□□□□ 0.11
KIF3A-208ENST00000618515 RAD50Q92878 1312 aa15.76■□□□□ 0.11
KIF3A-208ENST00000618515 CTIFO43310 598 aaKnown RBP15.76■□□□□ 0.11
KIF3A-208ENST00000618515 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.75■□□□□ 0.11
KIF3A-208ENST00000618515 ANKRD7Q92527 254 aa15.75■□□□□ 0.11
KIF3A-208ENST00000618515 NUDT16Q96DE0 195 aaKnown RBP15.75■□□□□ 0.11
KIF3A-208ENST00000618515 SLC4A2P04920 1241 aa15.75■□□□□ 0.11
KIF3A-208ENST00000618515 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.75■□□□□ 0.11
KIF3A-208ENST00000618515 GADD45BO75293 160 aaPredicted RBP15.74■□□□□ 0.11
KIF3A-208ENST00000618515 ZSCAN20P17040 1043 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms