RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 NOL8Q76FK4 1167 aaKnown RBP18.16■□□□□ 0.5
SRRT-217ENST00000618411 POLKQ9UBT6 870 aa18.16■□□□□ 0.5
SRRT-217ENST00000618411 CPSF1Q10570 1443 aaKnown RBP18.16■□□□□ 0.5
SRRT-217ENST00000618411 CNPY2Q9Y2B0 182 aa18.16■□□□□ 0.5
SRRT-217ENST00000618411 NPATQ14207 1427 aa18.15■□□□□ 0.5
SRRT-217ENST00000618411 PLCB2Q00722 1185 aa18.15■□□□□ 0.5
SRRT-217ENST00000618411 NCBP1Q09161 790 aaKnown RBP18.15■□□□□ 0.5
SRRT-217ENST00000618411 EPB41L2O43491 1005 aaKnown RBP18.15■□□□□ 0.5
SRRT-217ENST00000618411 CTNNA3Q9UI47 895 aa18.15■□□□□ 0.5
SRRT-217ENST00000618411 AP5Z1O43299 807 aa18.14■□□□□ 0.49
SRRT-217ENST00000618411 ZSCAN22P10073 491 aaPredicted RBP18.14■□□□□ 0.49
SRRT-217ENST00000618411 ANO2Q9NQ90 1003 aa18.14■□□□□ 0.49
SRRT-217ENST00000618411 TMEM51Q9NW97 253 aa18.14■□□□□ 0.49
SRRT-217ENST00000618411 ATP6V1DQ9Y5K8 247 aa18.14■□□□□ 0.49
SRRT-217ENST00000618411 IGSF3O75054 1194 aa18.13■□□□□ 0.49
SRRT-217ENST00000618411 MEIS3Q99687 375 aa18.13■□□□□ 0.49
SRRT-217ENST00000618411 MSH6P52701 1360 aa18.13■□□□□ 0.49
SRRT-217ENST00000618411 FRMPD1Q5SYB0 1578 aa18.13■□□□□ 0.49
SRRT-217ENST00000618411 RIMS2Q9UQ26 1411 aa18.13■□□□□ 0.49
SRRT-217ENST00000618411 CHMLP26374 656 aa18.13■□□□□ 0.49
SRRT-217ENST00000618411 PTPRCP08575 1304 aa18.13■□□□□ 0.49
SRRT-217ENST00000618411 KIF20BQ96Q89 1820 aa18.13■□□□□ 0.49
SRRT-217ENST00000618411 SMTNL1A8MU46 457 aa18.13■□□□□ 0.49
SRRT-217ENST00000618411 UPF3BQ9BZI7 483 aaKnown RBP18.13■□□□□ 0.49
SRRT-217ENST00000618411 CGNQ9P2M7 1197 aaKnown RBP18.13■□□□□ 0.49
SRRT-217ENST00000618411 DDX41Q9UJV9 622 aaKnown RBP18.13■□□□□ 0.49
SRRT-217ENST00000618411 ABCC3O15438 1527 aa18.12■□□□□ 0.49
SRRT-217ENST00000618411 SALL3Q9BXA9 1300 aa18.12■□□□□ 0.49
SRRT-217ENST00000618411 ERCC6L2Q5T890 1561 aa18.12■□□□□ 0.49
SRRT-217ENST00000618411 GIMAP6Q6P9H5 292 aa18.12■□□□□ 0.49
SRRT-217ENST00000618411 CFAP65Q6ZU64 1925 aaKnown RBP18.11■□□□□ 0.49
SRRT-217ENST00000618411 KIAA0232Q92628 1395 aa18.11■□□□□ 0.49
SRRT-217ENST00000618411 CLTCQ00610 1675 aaKnown RBP18.11■□□□□ 0.49
SRRT-217ENST00000618411 SPC24Q8NBT2 197 aa18.11■□□□□ 0.49
SRRT-217ENST00000618411 MORC2Q9Y6X9 1032 aaPredicted RBP18.11■□□□□ 0.49
SRRT-217ENST00000618411 SLFN14P0C7P3 912 aa18.1■□□□□ 0.49
SRRT-217ENST00000618411 CCDC192P0DO97 292 aa18.1■□□□□ 0.49
SRRT-217ENST00000618411 IL13P35225 146 aa18.1■□□□□ 0.49
SRRT-217ENST00000618411 DLG5Q8TDM6 1919 aa18.1■□□□□ 0.49
SRRT-217ENST00000618411 STX6O43752 255 aa18.09■□□□□ 0.49
SRRT-217ENST00000618411 KRT24Q2M2I5 525 aa18.09■□□□□ 0.49
SRRT-217ENST00000618411 TUBGCP6Q96RT7 1819 aa18.09■□□□□ 0.49
SRRT-217ENST00000618411 PAXBP1Q9Y5B6 917 aa18.09■□□□□ 0.49
SRRT-217ENST00000618411 F13A1P00488 732 aa18.09■□□□□ 0.49
SRRT-217ENST00000618411 NEXMIFQ5QGS0 1516 aa18.08■□□□□ 0.49
SRRT-217ENST00000618411 SYT1P21579 422 aa18.08■□□□□ 0.48
SRRT-217ENST00000618411 HSPA4P34932 840 aa18.08■□□□□ 0.48
SRRT-217ENST00000618411 STK26Q9P289 416 aa18.08■□□□□ 0.48
SRRT-217ENST00000618411 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.08■□□□□ 0.48
SRRT-217ENST00000618411 MINK1Q8N4C8 1332 aaPredicted RBP18.07■□□□□ 0.48
SRRT-217ENST00000618411 FIBPO43427 364 aa18.07■□□□□ 0.48
SRRT-217ENST00000618411 PTGS1P23219 599 aa18.07■□□□□ 0.48
SRRT-217ENST00000618411 PDE4CQ08493 712 aa18.07■□□□□ 0.48
SRRT-217ENST00000618411 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.07■□□□□ 0.48
SRRT-217ENST00000618411 YTHDC2Q9H6S0 1430 aaKnown RBP18.07■□□□□ 0.48
SRRT-217ENST00000618411 NUTM2DQ5VT03 806 aaPredicted RBP18.07■□□□□ 0.48
SRRT-217ENST00000618411 FAM200AQ8TCP9 573 aa18.07■□□□□ 0.48
SRRT-217ENST00000618411 MAP2P11137 1827 aaKnown RBP18.07■□□□□ 0.48
SRRT-217ENST00000618411 KIDINS220Q9ULH0 1771 aa18.07■□□□□ 0.48
SRRT-217ENST00000618411 FAM83GA6ND36 823 aa18.06■□□□□ 0.48
SRRT-217ENST00000618411 PIK3C2BO00750 1634 aa18.06■□□□□ 0.48
SRRT-217ENST00000618411 PTPRMP28827 1452 aa18.06■□□□□ 0.48
SRRT-217ENST00000618411 CCDC66A2RUB6 948 aa18.06■□□□□ 0.48
SRRT-217ENST00000618411 FBLN1P23142 703 aa18.06■□□□□ 0.48
SRRT-217ENST00000618411 RILPL2Q969X0 211 aa18.06■□□□□ 0.48
SRRT-217ENST00000618411 STAP2Q9UGK3 403 aa18.06■□□□□ 0.48
SRRT-217ENST00000618411 CHD1O14646 1710 aa18.06■□□□□ 0.48
SRRT-217ENST00000618411 TRIM6-TRIM34B2RNG4 842 aa18.05■□□□□ 0.48
SRRT-217ENST00000618411 LRRCC1Q9C099 1032 aa18.05■□□□□ 0.48
SRRT-217ENST00000618411 CABP1Q9NZU7 370 aa18.05■□□□□ 0.48
SRRT-217ENST00000618411 CCDC112Q8NEF3 446 aa18.05■□□□□ 0.48
SRRT-217ENST00000618411 KIF18AQ8NI77 898 aa18.05■□□□□ 0.48
SRRT-217ENST00000618411 TNNT1P13805 278 aa18.05■□□□□ 0.48
SRRT-217ENST00000618411 TERF2Q15554 542 aa18.05■□□□□ 0.48
SRRT-217ENST00000618411 TSHZ3Q63HK5 1081 aa18.05■□□□□ 0.48
SRRT-217ENST00000618411 TPRNQ4KMQ1 711 aa18.04■□□□□ 0.48
SRRT-217ENST00000618411 C16orf45Q96MC5 204 aaPredicted RBP18.04■□□□□ 0.48
SRRT-217ENST00000618411 SMC3Q9UQE7 1217 aa18.04■□□□□ 0.48
SRRT-217ENST00000618411 CDK12Q9NYV4 1490 aaPredicted RBP18.04■□□□□ 0.48
SRRT-217ENST00000618411 DCTN1Q14203 1278 aa18.04■□□□□ 0.48
SRRT-217ENST00000618411 CCDC186Q7Z3E2 898 aa18.04■□□□□ 0.48
SRRT-217ENST00000618411 TTC14Q96N46 770 aa18.04■□□□□ 0.48
SRRT-217ENST00000618411 LIMCH1Q9UPQ0 1083 aa18.04■□□□□ 0.48
SRRT-217ENST00000618411 CHL1O00533 1208 aa18.03■□□□□ 0.48
SRRT-217ENST00000618411 KRT222Q8N1A0 295 aa18.03■□□□□ 0.48
SRRT-217ENST00000618411 PRAM1Q96QH2 718 aa18.03■□□□□ 0.48
SRRT-217ENST00000618411 EXOC6BQ9Y2D4 811 aa18.03■□□□□ 0.48
SRRT-217ENST00000618411 CCT4P50991 539 aaKnown RBP18.03■□□□□ 0.48
SRRT-217ENST00000618411 FAM193AP78312 1265 aa18.03■□□□□ 0.48
SRRT-217ENST00000618411 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.03■□□□□ 0.48
SRRT-217ENST00000618411 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.02■□□□□ 0.48
SRRT-217ENST00000618411 CDK19Q9BWU1 502 aa18.02■□□□□ 0.48
SRRT-217ENST00000618411 EMILIN1Q9Y6C2 1016 aa18.02■□□□□ 0.48
SRRT-217ENST00000618411 GNAI2P04899 355 aa18.02■□□□□ 0.48
SRRT-217ENST00000618411 AOX1Q06278 1338 aa18.02■□□□□ 0.47
SRRT-217ENST00000618411 DNM1Q05193 864 aaKnown RBP18.01■□□□□ 0.47
SRRT-217ENST00000618411 MAP3K11Q16584 847 aa18.01■□□□□ 0.47
SRRT-217ENST00000618411 AK2P54819 239 aa18■□□□□ 0.47
SRRT-217ENST00000618411 LRMPQ12912 555 aa18■□□□□ 0.47
SRRT-217ENST00000618411 ZSCAN25Q6NSZ9 544 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms