RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-222ENST00000617185 ELL2O00472 640 aaPredicted RBP13.98□□□□□ -0.17
TP53-222ENST00000617185 CWC22Q9HCG8 908 aaKnown RBP13.98□□□□□ -0.17
TP53-222ENST00000617185 CCDC61Q9Y6R9 512 aa13.98□□□□□ -0.17
TP53-222ENST00000617185 CLGNO14967 610 aa13.97□□□□□ -0.17
TP53-222ENST00000617185 FAM184AQ8NB25 1140 aa13.97□□□□□ -0.17
TP53-222ENST00000617185 SETD1AO15047 1707 aaKnown RBP13.97□□□□□ -0.17
TP53-222ENST00000617185 WDR63Q8IWG1 891 aa13.97□□□□□ -0.17
TP53-222ENST00000617185 RBM42Q9BTD8 480 aaKnown RBP13.97□□□□□ -0.17
TP53-222ENST00000617185 FEZ2Q9UHY8 353 aaPredicted RBP13.97□□□□□ -0.17
TP53-222ENST00000617185 HDGFP51858 240 aaKnown RBP13.96□□□□□ -0.17
TP53-222ENST00000617185 HDAC5Q9UQL6 1122 aa13.96□□□□□ -0.17
TP53-222ENST00000617185 ERICH4A6NGS2 130 aa13.95□□□□□ -0.18
TP53-222ENST00000617185 TNNT3P45378 269 aaPredicted RBP13.95□□□□□ -0.18
TP53-222ENST00000617185 MPNDQ8N594 471 aa13.95□□□□□ -0.18
TP53-222ENST00000617185 KIF18AQ8NI77 898 aa13.95□□□□□ -0.18
TP53-222ENST00000617185 SYAP1Q96A49 352 aaPredicted RBP13.95□□□□□ -0.18
TP53-222ENST00000617185 COG3Q96JB2 828 aa13.95□□□□□ -0.18
TP53-222ENST00000617185 CPS1P31327 1500 aa13.95□□□□□ -0.18
TP53-222ENST00000617185 COL3A1P02461 1466 aaPredicted RBP13.95□□□□□ -0.18
TP53-222ENST00000617185 FAM83GA6ND36 823 aa13.95□□□□□ -0.18
TP53-222ENST00000617185 DCTN1Q14203 1278 aa13.95□□□□□ -0.18
TP53-222ENST00000617185 NCBP3Q53F19 620 aaKnown RBP13.95□□□□□ -0.18
TP53-222ENST00000617185 KIAA1524Q8TCG1 905 aa13.95□□□□□ -0.18
TP53-222ENST00000617185 SMC4Q9NTJ3 1288 aa13.95□□□□□ -0.18
TP53-222ENST00000617185 NUTM2GQ5VZR2 741 aa13.94□□□□□ -0.18
TP53-222ENST00000617185 AMOTL2Q9Y2J4 779 aa13.94□□□□□ -0.18
TP53-222ENST00000617185 PSEN1P49768 467 aa13.94□□□□□ -0.18
TP53-222ENST00000617185 ACEP12821 1306 aa13.93□□□□□ -0.18
TP53-222ENST00000617185 PHF14O94880 888 aa13.93□□□□□ -0.18
TP53-222ENST00000617185 BMP2KLQ5H9B9 411 aa13.93□□□□□ -0.18
TP53-222ENST00000617185 ADAMTS13Q76LX8 1427 aa13.93□□□□□ -0.18
TP53-222ENST00000617185 AXDND1Q5T1B0 1012 aaPredicted RBP13.93□□□□□ -0.18
TP53-222ENST00000617185 SSH1Q8WYL5 1049 aa13.93□□□□□ -0.18
TP53-222ENST00000617185 NSFL1CQ9UNZ2 370 aaKnown RBP13.93□□□□□ -0.18
TP53-222ENST00000617185 EID1Q9Y6B2 187 aa13.93□□□□□ -0.18
TP53-222ENST00000617185 ADCY5O95622 1261 aa13.92□□□□□ -0.18
TP53-222ENST00000617185 PKP1Q13835 747 aa13.92□□□□□ -0.18
TP53-222ENST00000617185 CCDC27Q2M243 656 aa13.92□□□□□ -0.18
TP53-222ENST00000617185 BCCIPQ9P287 314 aaKnown RBP eCLIP13.92□□□□□ -0.18
TP53-222ENST00000617185 APPP05067 770 aa13.92□□□□□ -0.18
TP53-222ENST00000617185 TPM3P06753 285 aa13.92□□□□□ -0.18
TP53-222ENST00000617185 RABEP1Q15276 862 aa13.92□□□□□ -0.18
TP53-222ENST00000617185 USP25Q9UHP3 1055 aa13.92□□□□□ -0.18
TP53-222ENST00000617185 PTPRUQ92729 1446 aa13.92□□□□□ -0.18
TP53-222ENST00000617185 MAP2P11137 1827 aaKnown RBP13.92□□□□□ -0.18
TP53-222ENST00000617185 UBR1Q8IWV7 1749 aa13.91□□□□□ -0.18
TP53-222ENST00000617185 ZBTB9Q96C00 473 aa13.91□□□□□ -0.18
TP53-222ENST00000617185 CPSF1Q10570 1443 aaKnown RBP13.9□□□□□ -0.18
TP53-222ENST00000617185 DLC1Q96QB1 1528 aa13.9□□□□□ -0.18
TP53-222ENST00000617185 KIF20BQ96Q89 1820 aa13.9□□□□□ -0.18
TP53-222ENST00000617185 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.9□□□□□ -0.18
TP53-222ENST00000617185 NUCB1Q02818 461 aa13.9□□□□□ -0.18
TP53-222ENST00000617185 DZIP1LQ8IYY4 767 aaKnown RBP13.9□□□□□ -0.18
TP53-222ENST00000617185 ZKSCAN2Q63HK3 967 aa13.9□□□□□ -0.18
TP53-222ENST00000617185 TRERF1Q96PN7 1200 aa13.9□□□□□ -0.18
TP53-222ENST00000617185 NOB1Q9ULX3 412 aaKnown RBP13.9□□□□□ -0.18
TP53-222ENST00000617185 LRRC7Q96NW7 1537 aa13.89□□□□□ -0.19
TP53-222ENST00000617185 ATP7BP35670 1465 aa13.89□□□□□ -0.19
TP53-222ENST00000617185 PNPLA6Q8IY17 1366 aa13.89□□□□□ -0.19
TP53-222ENST00000617185 SMTNL1A8MU46 457 aa13.89□□□□□ -0.19
TP53-222ENST00000617185 IL13P35225 146 aa13.89□□□□□ -0.19
TP53-222ENST00000617185 HSP90AB2PQ58FF8 381 aa13.89□□□□□ -0.19
TP53-222ENST00000617185 TSPYL6Q8N831 410 aa13.89□□□□□ -0.19
TP53-222ENST00000617185 EDC4Q6P2E9 1401 aaKnown RBP13.89□□□□□ -0.19
TP53-222ENST00000617185 FCHSD2O94868 740 aa13.89□□□□□ -0.19
TP53-222ENST00000617185 HNRNPH2P55795 449 aaKnown RBP13.89□□□□□ -0.19
TP53-222ENST00000617185 RAD51AP2Q09MP3 1159 aa13.89□□□□□ -0.19
TP53-222ENST00000617185 ITPRIPQ8IWB1 547 aa13.89□□□□□ -0.19
TP53-222ENST00000617185 FAM53CQ9NYF3 392 aa13.89□□□□□ -0.19
TP53-222ENST00000617185 ZDHHC9Q9Y397 364 aa13.89□□□□□ -0.19
TP53-222ENST00000617185 TRIM27P14373 513 aa13.88□□□□□ -0.19
TP53-222ENST00000617185 CYP2C19P33261 490 aa13.88□□□□□ -0.19
TP53-222ENST00000617185 CTR9Q6PD62 1173 aa13.88□□□□□ -0.19
TP53-222ENST00000617185 TBC1D9Q6ZT07 1266 aa13.88□□□□□ -0.19
TP53-222ENST00000617185 ZNF622Q969S3 477 aaKnown RBP eCLIP13.88□□□□□ -0.195e-6■□□□□ 11.2
TP53-222ENST00000617185 CHMP4CQ96CF2 233 aa13.88□□□□□ -0.19
TP53-222ENST00000617185 TTC21BQ7Z4L5 1316 aa13.88□□□□□ -0.19
TP53-222ENST00000617185 SULT6B1Q6IMI4 303 aa13.87□□□□□ -0.19
TP53-222ENST00000617185 C14orf37Q86TY3 774 aa13.87□□□□□ -0.19
TP53-222ENST00000617185 NGDNQ8NEJ9 315 aaKnown RBP13.87□□□□□ -0.19
TP53-222ENST00000617185 RSPH14Q9UHP6 348 aa13.87□□□□□ -0.19
TP53-222ENST00000617185 PYCARDQ9ULZ3 195 aa13.87□□□□□ -0.19
TP53-222ENST00000617185 DDX19BQ9UMR2 479 aa13.87□□□□□ -0.19
TP53-222ENST00000617185 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.87□□□□□ -0.19
TP53-222ENST00000617185 ADGRB2O60241 1585 aa13.87□□□□□ -0.19
TP53-222ENST00000617185 KCNA6P17658 529 aa13.87□□□□□ -0.19
TP53-222ENST00000617185 ZNF397Q8NF99 534 aaPredicted RBP13.87□□□□□ -0.19
TP53-222ENST00000617185 LNPKQ9C0E8 428 aa13.87□□□□□ -0.19
TP53-222ENST00000617185 RASSF4Q9H2L5 321 aa13.87□□□□□ -0.19
TP53-222ENST00000617185 ANKRD26Q9UPS8 1709 aa13.87□□□□□ -0.19
TP53-222ENST00000617185 CHD1LQ86WJ1 897 aa13.86□□□□□ -0.19
TP53-222ENST00000617185 MED14O60244 1454 aa13.86□□□□□ -0.19
TP53-222ENST00000617185 NOP2P46087 812 aaKnown RBP13.86□□□□□ -0.19
TP53-222ENST00000617185 GTF2A1P52655 376 aaPredicted RBP13.86□□□□□ -0.19
TP53-222ENST00000617185 KRT24Q2M2I5 525 aa13.86□□□□□ -0.19
TP53-222ENST00000617185 PAXBP1Q9Y5B6 917 aa13.85□□□□□ -0.19
TP53-222ENST00000617185 PLEKHG1Q9ULL1 1385 aa13.85□□□□□ -0.19
TP53-222ENST00000617185 LOC102724159A0A0B4J2E5 919 aa13.85□□□□□ -0.19
TP53-222ENST00000617185 GOLGA6L6A8MZA4 724 aa13.85□□□□□ -0.19
TP53-222ENST00000617185 KDM4AO75164 1064 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms