RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 FBLN1P23142 703 aa18.89■□□□□ 0.61
GPN1-212ENST00000616939 PIBF1Q8WXW3 757 aa18.89■□□□□ 0.61
GPN1-212ENST00000616939 WDR33Q9C0J8 1336 aaKnown RBP18.89■□□□□ 0.61
GPN1-212ENST00000616939 NRXN3Q9Y4C0 1643 aa18.89■□□□□ 0.61
GPN1-212ENST00000616939 PTMAP06454 111 aaKnown RBP18.88■□□□□ 0.61
GPN1-212ENST00000616939 CRB1P82279 1406 aa18.88■□□□□ 0.61
GPN1-212ENST00000616939 COG3Q96JB2 828 aa18.88■□□□□ 0.61
GPN1-212ENST00000616939 NME9Q86XW9 330 aa18.88■□□□□ 0.61
GPN1-212ENST00000616939 CCDC94Q9BW85 323 aaPredicted RBP18.88■□□□□ 0.61
GPN1-212ENST00000616939 STAP2Q9UGK3 403 aa18.88■□□□□ 0.61
GPN1-212ENST00000616939 RPAP1Q9BWH6 1393 aaPredicted RBP18.87■□□□□ 0.61
GPN1-212ENST00000616939 NPM1P06748 294 aaKnown RBP eCLIP18.87■□□□□ 0.61
GPN1-212ENST00000616939 FMN2Q9NZ56 1722 aa18.87■□□□□ 0.61
GPN1-212ENST00000616939 LRRC37A3O60309 1634 aa18.87■□□□□ 0.61
GPN1-212ENST00000616939 SRCIN1Q9C0H9 1055 aa18.86■□□□□ 0.61
GPN1-212ENST00000616939 CCDC183Q5T5S1 534 aa18.86■□□□□ 0.61
GPN1-212ENST00000616939 RNF214Q8ND24 703 aa18.86■□□□□ 0.61
GPN1-212ENST00000616939 SPTLC3Q9NUV7 552 aa18.86■□□□□ 0.61
GPN1-212ENST00000616939 A2ML1A8K2U0 1454 aa18.85■□□□□ 0.61
GPN1-212ENST00000616939 TOPAZ1Q8N9V7 1692 aa18.85■□□□□ 0.61
GPN1-212ENST00000616939 WASLO00401 505 aaPredicted RBP18.85■□□□□ 0.61
GPN1-212ENST00000616939 CHMLP26374 656 aa18.85■□□□□ 0.61
GPN1-212ENST00000616939 DCTN1Q14203 1278 aa18.85■□□□□ 0.61
GPN1-212ENST00000616939 UTP14CQ5TAP6 766 aaKnown RBP18.85■□□□□ 0.61
GPN1-212ENST00000616939 CHAMP1Q96JM3 812 aa18.85■□□□□ 0.61
GPN1-212ENST00000616939 CRYBG1Q9Y4K1 1723 aa18.85■□□□□ 0.61
GPN1-212ENST00000616939 PXDNLA1KZ92 1463 aa18.85■□□□□ 0.61
GPN1-212ENST00000616939 TECPR2O15040 1411 aa18.85■□□□□ 0.61
GPN1-212ENST00000616939 PEAK1Q9H792 1746 aa18.84■□□□□ 0.61
GPN1-212ENST00000616939 GNAI2P04899 355 aa18.84■□□□□ 0.61
GPN1-212ENST00000616939 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.84■□□□□ 0.61
GPN1-212ENST00000616939 SIRT1Q96EB6 747 aa18.84■□□□□ 0.61
GPN1-212ENST00000616939 MX1P20591 662 aa18.83■□□□□ 0.6
GPN1-212ENST00000616939 KRT24Q2M2I5 525 aa18.83■□□□□ 0.6
GPN1-212ENST00000616939 LRRCC1Q9C099 1032 aa18.83■□□□□ 0.6
GPN1-212ENST00000616939 PALD1Q9ULE6 856 aa18.83■□□□□ 0.6
GPN1-212ENST00000616939 USP48Q86UV5 1035 aa18.82■□□□□ 0.6
GPN1-212ENST00000616939 TPM3P06753 285 aa18.81■□□□□ 0.6
GPN1-212ENST00000616939 OVOS2A0A0J9YW53 1432 aa18.81■□□□□ 0.6
GPN1-212ENST00000616939 OVOS2Q6IE36 1432 aa18.81■□□□□ 0.6
GPN1-212ENST00000616939 APBB1O00213 710 aa18.81■□□□□ 0.6
GPN1-212ENST00000616939 FKBP5Q13451 457 aaPredicted RBP18.81■□□□□ 0.6
GPN1-212ENST00000616939 NOLC1Q14978 699 aaKnown RBP eCLIP18.81■□□□□ 0.6
GPN1-212ENST00000616939 FOXD4L5Q5VV16 416 aaPredicted RBP18.81■□□□□ 0.6
GPN1-212ENST00000616939 FOXD4L4Q8WXT5 416 aaPredicted RBP18.81■□□□□ 0.6
GPN1-212ENST00000616939 CHD2O14647 1828 aaKnown RBP18.8■□□□□ 0.6
GPN1-212ENST00000616939 GADD45BO75293 160 aaPredicted RBP18.8■□□□□ 0.6
GPN1-212ENST00000616939 GNAI3P08754 354 aa18.8■□□□□ 0.6
GPN1-212ENST00000616939 EIF4A2Q14240 407 aaKnown RBP18.8■□□□□ 0.6
GPN1-212ENST00000616939 ZRANB1Q9UGI0 708 aa18.8■□□□□ 0.6
GPN1-212ENST00000616939 SLC4A2P04920 1241 aa18.79■□□□□ 0.6
GPN1-212ENST00000616939 HSPA4P34932 840 aa18.79■□□□□ 0.6
GPN1-212ENST00000616939 ATP8B2P98198 1209 aa18.79■□□□□ 0.6
GPN1-212ENST00000616939 WAPLQ7Z5K2 1190 aa18.79■□□□□ 0.6
GPN1-212ENST00000616939 SOS1Q07889 1333 aaPredicted RBP18.79■□□□□ 0.6
GPN1-212ENST00000616939 RAPGEF3O95398 923 aa18.79■□□□□ 0.6
GPN1-212ENST00000616939 UBE2HP62256 183 aa18.79■□□□□ 0.6
GPN1-212ENST00000616939 RRS1Q15050 365 aaKnown RBP18.79■□□□□ 0.6
GPN1-212ENST00000616939 ANO2Q9NQ90 1003 aa18.79■□□□□ 0.6
GPN1-212ENST00000616939 AGLP35573 1532 aa18.78■□□□□ 0.6
GPN1-212ENST00000616939 TTC21BQ7Z4L5 1316 aa18.78■□□□□ 0.6
GPN1-212ENST00000616939 NUDT16Q96DE0 195 aaKnown RBP18.78■□□□□ 0.6
GPN1-212ENST00000616939 DMTNQ08495 405 aa18.77■□□□□ 0.6
GPN1-212ENST00000616939 SULT6B1Q6IMI4 303 aa18.77■□□□□ 0.6
GPN1-212ENST00000616939 CCDC61Q9Y6R9 512 aa18.77■□□□□ 0.6
GPN1-212ENST00000616939 ADCY5O95622 1261 aa18.77■□□□□ 0.59
GPN1-212ENST00000616939 ZSCAN22P10073 491 aaPredicted RBP18.77■□□□□ 0.59
GPN1-212ENST00000616939 AEBP1Q8IUX7 1158 aa18.77■□□□□ 0.59
GPN1-212ENST00000616939 FUCA2Q9BTY2 467 aa18.77■□□□□ 0.59
GPN1-212ENST00000616939 PPP6R1Q9UPN7 881 aa18.77■□□□□ 0.59
GPN1-212ENST00000616939 DNTTIP2Q5QJE6 756 aaKnown RBP18.76■□□□□ 0.59
GPN1-212ENST00000616939 ZNF710Q8N1W2 664 aa18.76■□□□□ 0.59
GPN1-212ENST00000616939 USP25Q9UHP3 1055 aa18.76■□□□□ 0.59
GPN1-212ENST00000616939 ATP6V1DQ9Y5K8 247 aa18.76■□□□□ 0.59
GPN1-212ENST00000616939 USP31Q70CQ4 1352 aa18.75■□□□□ 0.59
GPN1-212ENST00000616939 KDM4AO75164 1064 aa18.75■□□□□ 0.59
GPN1-212ENST00000616939 MCM10Q7L590 875 aa18.75■□□□□ 0.59
GPN1-212ENST00000616939 EXOC6BQ9Y2D4 811 aa18.75■□□□□ 0.59
GPN1-212ENST00000616939 RAD50Q92878 1312 aa18.75■□□□□ 0.59
GPN1-212ENST00000616939 TTC14Q96N46 770 aa18.74■□□□□ 0.59
GPN1-212ENST00000616939 G2E3Q7L622 706 aa18.74■□□□□ 0.59
GPN1-212ENST00000616939 KIF3AQ9Y496 699 aa18.74■□□□□ 0.59
GPN1-212ENST00000616939 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.73■□□□□ 0.59
GPN1-212ENST00000616939 TRIM6-TRIM34B2RNG4 842 aa18.72■□□□□ 0.59
GPN1-212ENST00000616939 GTPBP4Q9BZE4 634 aaKnown RBP18.72■□□□□ 0.59
GPN1-212ENST00000616939 DIAPH3Q9NSV4 1193 aa18.72■□□□□ 0.59
GPN1-212ENST00000616939 RAB11FIP3O75154 756 aa18.72■□□□□ 0.59
GPN1-212ENST00000616939 F13A1P00488 732 aa18.72■□□□□ 0.59
GPN1-212ENST00000616939 RILPL2Q969X0 211 aa18.72■□□□□ 0.59
GPN1-212ENST00000616939 GDPD2Q9HCC8 539 aa18.72■□□□□ 0.59
GPN1-212ENST00000616939 STAG3Q9UJ98 1225 aa18.72■□□□□ 0.59
GPN1-212ENST00000616939 KDRP35968 1356 aa18.72■□□□□ 0.59
GPN1-212ENST00000616939 RIMS1Q86UR5 1692 aaKnown RBP18.71■□□□□ 0.59
GPN1-212ENST00000616939 STX6O43752 255 aa18.71■□□□□ 0.59
GPN1-212ENST00000616939 FBXO31Q5XUX0 539 aaPredicted RBP18.71■□□□□ 0.59
GPN1-212ENST00000616939 KIAA1524Q8TCG1 905 aa18.71■□□□□ 0.59
GPN1-212ENST00000616939 STK31Q9BXU1 1019 aa18.71■□□□□ 0.59
GPN1-212ENST00000616939 UPF3BQ9BZI7 483 aaKnown RBP18.71■□□□□ 0.59
GPN1-212ENST00000616939 CNPY2Q9Y2B0 182 aa18.71■□□□□ 0.59
GPN1-212ENST00000616939 F6X3S4 739 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms