RNA–Protein interactions for RNA: ENST00000616596.4

RDM1-220, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best) BASIC

Gene RDM1, Length 1,032 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-220ENST00000616596 CABP4P57796 275 aa20.58■□□□□ 0.89
RDM1-220ENST00000616596 RTF1Q92541 710 aaKnown RBP20.58■□□□□ 0.89
RDM1-220ENST00000616596 SLC52A2Q9HAB3 445 aa20.58■□□□□ 0.89
RDM1-220ENST00000616596 TMOD3Q9NYL9 352 aa20.58■□□□□ 0.89
RDM1-220ENST00000616596 KDM3BQ7LBC6 1761 aa20.57■□□□□ 0.88
RDM1-220ENST00000616596 SF3B2Q13435 895 aaKnown RBP20.57■□□□□ 0.88
RDM1-220ENST00000616596 NUP188Q5SRE5 1749 aa20.57■□□□□ 0.88
RDM1-220ENST00000616596 DEFB132Q7Z7B7 95 aa20.57■□□□□ 0.88
RDM1-220ENST00000616596 NFATC2IPQ8NCF5 419 aa20.57■□□□□ 0.88
RDM1-220ENST00000616596 TRIM35Q9UPQ4 493 aa20.57■□□□□ 0.88
RDM1-220ENST00000616596 THUMPD2Q9BTF0 503 aaKnown RBP20.56■□□□□ 0.88
RDM1-220ENST00000616596 TAF1LQ8IZX4 1826 aa20.55■□□□□ 0.88
RDM1-220ENST00000616596 PLSCR1O15162 318 aa20.55■□□□□ 0.88
RDM1-220ENST00000616596 BAG6P46379 1132 aa20.55■□□□□ 0.88
RDM1-220ENST00000616596 EN1Q05925 392 aaPredicted RBP20.54■□□□□ 0.88
RDM1-220ENST00000616596 ASAP1Q9ULH1 1129 aa20.54■□□□□ 0.88
RDM1-220ENST00000616596 LMOD3Q0VAK6 560 aa20.53■□□□□ 0.88
RDM1-220ENST00000616596 TEFQ10587 303 aa20.53■□□□□ 0.88
RDM1-220ENST00000616596 CAMKK2Q96RR4 588 aa20.53■□□□□ 0.88
RDM1-220ENST00000616596 ATG3Q9NT62 314 aa20.53■□□□□ 0.88
RDM1-220ENST00000616596 ZNF831Q5JPB2 1677 aa20.53■□□□□ 0.88
RDM1-220ENST00000616596 EZH2Q15910 746 aaKnown RBP20.52■□□□□ 0.88
RDM1-220ENST00000616596 PALLDQ8WX93 1383 aa20.51■□□□□ 0.87
RDM1-220ENST00000616596 TJP1Q07157 1748 aa20.51■□□□□ 0.87
RDM1-220ENST00000616596 KCPQ6ZWJ8 1503 aa20.51■□□□□ 0.87
RDM1-220ENST00000616596 C5P01031 1676 aa20.51■□□□□ 0.87
RDM1-220ENST00000616596 CICQ96RK0 1608 aaPredicted RBP20.5■□□□□ 0.87
RDM1-220ENST00000616596 PROM2Q8N271 834 aa20.5■□□□□ 0.87
RDM1-220ENST00000616596 COL5A3P25940 1745 aaPredicted RBP20.5■□□□□ 0.87
RDM1-220ENST00000616596 SLC39A6Q13433 755 aa20.49■□□□□ 0.87
RDM1-220ENST00000616596 NCBP3Q53F19 620 aaKnown RBP20.49■□□□□ 0.87
RDM1-220ENST00000616596 SMARCC1Q92922 1105 aaPredicted RBP20.49■□□□□ 0.87
RDM1-220ENST00000616596 TAF7Q15545 349 aaPredicted RBP20.48■□□□□ 0.87
RDM1-220ENST00000616596 TXNRD1Q16881 649 aa20.48■□□□□ 0.87
RDM1-220ENST00000616596 CCDC27Q2M243 656 aa20.48■□□□□ 0.87
RDM1-220ENST00000616596 SALL2Q9Y467 1007 aaPredicted RBP20.47■□□□□ 0.87
RDM1-220ENST00000616596 BTBD11A6QL63 1104 aa20.46■□□□□ 0.87
RDM1-220ENST00000616596 WWC1Q8IX03 1113 aa20.46■□□□□ 0.87
RDM1-220ENST00000616596 LRRC4BQ9NT99 713 aa20.46■□□□□ 0.87
RDM1-220ENST00000616596 MIS18AQ9NYP9 233 aa20.46■□□□□ 0.87
RDM1-220ENST00000616596 KCNQ3O43525 872 aa20.45■□□□□ 0.86
RDM1-220ENST00000616596 KCNQ4P56696 695 aa20.45■□□□□ 0.86
RDM1-220ENST00000616596 ZNF790Q6PG37 636 aa20.45■□□□□ 0.86
RDM1-220ENST00000616596 SLC4A9Q96Q91 983 aa20.45■□□□□ 0.86
RDM1-220ENST00000616596 TUBGCP6Q96RT7 1819 aa20.45■□□□□ 0.86
RDM1-220ENST00000616596 LOC102724428A0A0B4J2F2 783 aa20.43■□□□□ 0.86
RDM1-220ENST00000616596 PTCD1O75127 700 aaKnown RBP20.43■□□□□ 0.86
RDM1-220ENST00000616596 SIK1P57059 783 aa20.43■□□□□ 0.86
RDM1-220ENST00000616596 RBM42Q9BTD8 480 aaKnown RBP20.43■□□□□ 0.86
RDM1-220ENST00000616596 CCNL1Q9UK58 526 aaPredicted RBP20.43■□□□□ 0.86
RDM1-220ENST00000616596 C4BP0C0L5 1744 aa20.43■□□□□ 0.86
RDM1-220ENST00000616596 LAMB4A4D0S4 1761 aa20.42■□□□□ 0.86
RDM1-220ENST00000616596 SLC27A3Q5K4L6 730 aa20.42■□□□□ 0.86
RDM1-220ENST00000616596 NGEFQ8N5V2 710 aa20.42■□□□□ 0.86
RDM1-220ENST00000616596 MYH14Q7Z406 1995 aaKnown RBP20.41■□□□□ 0.86
RDM1-220ENST00000616596 ZNF853P0CG23 659 aa20.41■□□□□ 0.86
RDM1-220ENST00000616596 TTC5Q8N0Z6 440 aa20.41■□□□□ 0.86
RDM1-220ENST00000616596 ZNF496Q96IT1 587 aaPredicted RBP20.41■□□□□ 0.86
RDM1-220ENST00000616596 CHL1O00533 1208 aa20.4■□□□□ 0.86
RDM1-220ENST00000616596 ITPK1Q13572 414 aa20.4■□□□□ 0.86
RDM1-220ENST00000616596 ZNF521Q96K83 1311 aa20.4■□□□□ 0.86
RDM1-220ENST00000616596 BABAM1Q9NWV8 329 aa20.4■□□□□ 0.86
RDM1-220ENST00000616596 TSPYL4Q9UJ04 414 aa20.4■□□□□ 0.86
RDM1-220ENST00000616596 LAS1LQ9Y4W2 734 aaKnown RBP20.4■□□□□ 0.86
RDM1-220ENST00000616596 UBR3Q6ZT12 1888 aa20.39■□□□□ 0.86
RDM1-220ENST00000616596 QSER1Q2KHR3 1735 aa20.39■□□□□ 0.86
RDM1-220ENST00000616596 ATP6V1AP38606 617 aa20.39■□□□□ 0.85
RDM1-220ENST00000616596 CALD1Q05682 793 aaKnown RBP20.39■□□□□ 0.85
RDM1-220ENST00000616596 CFAP44Q96MT7 982 aa20.39■□□□□ 0.85
RDM1-220ENST00000616596 HEG1Q9ULI3 1381 aa20.38■□□□□ 0.85
RDM1-220ENST00000616596 FMNL2Q96PY5 1086 aa20.38■□□□□ 0.85
RDM1-220ENST00000616596 IFT57Q9NWB7 429 aa20.38■□□□□ 0.85
RDM1-220ENST00000616596 IL16Q14005 1332 aa20.37■□□□□ 0.85
RDM1-220ENST00000616596 EIF4A1P60842 406 aaKnown RBP20.37■□□□□ 0.85
RDM1-220ENST00000616596 WDR63Q8IWG1 891 aa20.37■□□□□ 0.85
RDM1-220ENST00000616596 LINC00116Q8NCU8 138 aa20.37■□□□□ 0.85
RDM1-220ENST00000616596 ANO8Q9HCE9 1232 aaPredicted RBP20.37■□□□□ 0.85
RDM1-220ENST00000616596 GNAI1P63096 354 aa20.36■□□□□ 0.85
RDM1-220ENST00000616596 VSIG10Q8N0Z9 540 aa20.36■□□□□ 0.85
RDM1-220ENST00000616596 MBIPQ9NS73 344 aa20.36■□□□□ 0.85
RDM1-220ENST00000616596 DNAJC10Q8IXB1 793 aa20.35■□□□□ 0.85
RDM1-220ENST00000616596 SPINK5Q9NQ38 1064 aaPredicted RBP20.35■□□□□ 0.85
RDM1-220ENST00000616596 PRAMEF22A3QJZ6 481 aa20.34■□□□□ 0.85
RDM1-220ENST00000616596 HNRNPUQ00839 825 aaKnown RBP eCLIP20.34■□□□□ 0.85
RDM1-220ENST00000616596 ZNF827Q17R98 1081 aa20.34■□□□□ 0.85
RDM1-220ENST00000616596 AKT1S1Q96B36 256 aa20.33■□□□□ 0.85
RDM1-220ENST00000616596 KRT24Q2M2I5 525 aa20.32■□□□□ 0.84
RDM1-220ENST00000616596 TSR2Q969E8 191 aaKnown RBP20.32■□□□□ 0.84
RDM1-220ENST00000616596 GIGYF1O75420 1035 aaPredicted RBP20.31■□□□□ 0.84
RDM1-220ENST00000616596 SNRPA1P09661 255 aaKnown RBP20.31■□□□□ 0.84
RDM1-220ENST00000616596 CYP19A1P11511 503 aaPredicted RBP20.31■□□□□ 0.84
RDM1-220ENST00000616596 C4AP0C0L4 1744 aa20.3■□□□□ 0.84
RDM1-220ENST00000616596 SLC15A2Q16348 729 aa20.3■□□□□ 0.84
RDM1-220ENST00000616596 USP16Q9Y5T5 823 aa20.3■□□□□ 0.84
RDM1-220ENST00000616596 CASZ1Q86V15 1759 aa20.3■□□□□ 0.84
RDM1-220ENST00000616596 CNTNAP4Q9C0A0 1308 aa20.29■□□□□ 0.84
RDM1-220ENST00000616596 FANCIQ9NVI1 1328 aa20.29■□□□□ 0.84
RDM1-220ENST00000616596 GOLGA2Q08379 1002 aa20.29■□□□□ 0.84
RDM1-220ENST00000616596 NBPF14Q5TI25 921 aa20.29■□□□□ 0.84
RDM1-220ENST00000616596 STK32BQ9NY57 414 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms