RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 ARHGAP45Q92619 1136 aa16.16■□□□□ 0.18
PCDHA11-202ENST00000616325 USP48Q86UV5 1035 aa16.16■□□□□ 0.18
PCDHA11-202ENST00000616325 ANKRD44Q8N8A2 993 aa16.16■□□□□ 0.18
PCDHA11-202ENST00000616325 KIF20AO95235 890 aa16.16■□□□□ 0.18
PCDHA11-202ENST00000616325 PALD1Q9ULE6 856 aa16.16■□□□□ 0.18
PCDHA11-202ENST00000616325 PHF14O94880 888 aa16.15■□□□□ 0.18
PCDHA11-202ENST00000616325 CYB5RLQ6IPT4 315 aa16.15■□□□□ 0.18
PCDHA11-202ENST00000616325 NUTM1Q86Y26 1132 aa16.15■□□□□ 0.18
PCDHA11-202ENST00000616325 VWDEQ8N2E2 1590 aa16.15■□□□□ 0.18
PCDHA11-202ENST00000616325 CAMSAP1Q5T5Y3 1602 aa16.15■□□□□ 0.18
PCDHA11-202ENST00000616325 ERICH4A6NGS2 130 aa16.15■□□□□ 0.18
PCDHA11-202ENST00000616325 FIBPO43427 364 aa16.15■□□□□ 0.18
PCDHA11-202ENST00000616325 POGZQ7Z3K3 1410 aa16.15■□□□□ 0.18
PCDHA11-202ENST00000616325 KIDINS220Q9ULH0 1771 aa16.15■□□□□ 0.18
PCDHA11-202ENST00000616325 NPHP1O15259 732 aa16.15■□□□□ 0.18
PCDHA11-202ENST00000616325 EIF4A2Q14240 407 aaKnown RBP16.15■□□□□ 0.18
PCDHA11-202ENST00000616325 HMMRO75330 724 aa16.14■□□□□ 0.17
PCDHA11-202ENST00000616325 EIF2S2P20042 333 aaKnown RBP16.14■□□□□ 0.17
PCDHA11-202ENST00000616325 GIMAP6Q6P9H5 292 aa16.14■□□□□ 0.17
PCDHA11-202ENST00000616325 NAP1L2Q9ULW6 460 aaPredicted RBP16.14■□□□□ 0.17
PCDHA11-202ENST00000616325 UHRF1BP1LA0JNW5 1464 aa16.14■□□□□ 0.17
PCDHA11-202ENST00000616325 WASLO00401 505 aaPredicted RBP16.14■□□□□ 0.17
PCDHA11-202ENST00000616325 DIAPH3Q9NSV4 1193 aa16.14■□□□□ 0.17
PCDHA11-202ENST00000616325 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.13■□□□□ 0.17
PCDHA11-202ENST00000616325 NAA30Q147X3 362 aaPredicted RBP16.13■□□□□ 0.17
PCDHA11-202ENST00000616325 STK31Q9BXU1 1019 aa16.13■□□□□ 0.17
PCDHA11-202ENST00000616325 KCNJ4P48050 445 aa16.13■□□□□ 0.17
PCDHA11-202ENST00000616325 C16orf45Q96MC5 204 aaPredicted RBP16.13■□□□□ 0.17
PCDHA11-202ENST00000616325 PYCARDQ9ULZ3 195 aa16.13■□□□□ 0.17
PCDHA11-202ENST00000616325 RIMS2Q9UQ26 1411 aa16.13■□□□□ 0.17
PCDHA11-202ENST00000616325 FAM135BQ49AJ0 1406 aa16.12■□□□□ 0.17
PCDHA11-202ENST00000616325 YEATS2Q9ULM3 1422 aa16.12■□□□□ 0.17
PCDHA11-202ENST00000616325 PDE1AP54750 535 aa16.12■□□□□ 0.17
PCDHA11-202ENST00000616325 PUS7Q96PZ0 661 aaKnown RBP16.12■□□□□ 0.17
PCDHA11-202ENST00000616325 RPAP2Q8IXW5 612 aaPredicted RBP16.12■□□□□ 0.17
PCDHA11-202ENST00000616325 CCDC61Q9Y6R9 512 aa16.12■□□□□ 0.17
PCDHA11-202ENST00000616325 COL3A1P02461 1466 aaPredicted RBP16.12■□□□□ 0.17
PCDHA11-202ENST00000616325 SETBP1Q9Y6X0 1596 aa16.11■□□□□ 0.17
PCDHA11-202ENST00000616325 ZNF853P0CG23 659 aa16.11■□□□□ 0.17
PCDHA11-202ENST00000616325 AMPHP49418 695 aa16.11■□□□□ 0.17
PCDHA11-202ENST00000616325 CNPY2Q9Y2B0 182 aa16.11■□□□□ 0.17
PCDHA11-202ENST00000616325 PNMA6EA0A0J9YXQ4 647 aa16.1■□□□□ 0.17
PCDHA11-202ENST00000616325 CPA1P15085 419 aa16.1■□□□□ 0.17
PCDHA11-202ENST00000616325 MCCP23508 829 aa16.1■□□□□ 0.17
PCDHA11-202ENST00000616325 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.1■□□□□ 0.17
PCDHA11-202ENST00000616325 V9GYY5 206 aaPredicted RBP16.1■□□□□ 0.17
PCDHA11-202ENST00000616325 OS9Q13438 667 aaPredicted RBP16.1■□□□□ 0.17
PCDHA11-202ENST00000616325 ABCC3O15438 1527 aa16.1■□□□□ 0.17
PCDHA11-202ENST00000616325 ADGRB2O60241 1585 aa16.1■□□□□ 0.17
PCDHA11-202ENST00000616325 UNC5CLQ8IV45 518 aa16.1■□□□□ 0.17
PCDHA11-202ENST00000616325 CD163L1Q9NR16 1453 aa16.1■□□□□ 0.17
PCDHA11-202ENST00000616325 SLC26A8Q96RN1 970 aa16.09■□□□□ 0.17
PCDHA11-202ENST00000616325 LRRFIP2Q9Y608 721 aaKnown RBP16.09■□□□□ 0.17
PCDHA11-202ENST00000616325 RTL1A6NKG5 1358 aa16.08■□□□□ 0.17
PCDHA11-202ENST00000616325 ANXA1P04083 346 aa16.08■□□□□ 0.16
PCDHA11-202ENST00000616325 USHBP1Q8N6Y0 703 aa16.08■□□□□ 0.16
PCDHA11-202ENST00000616325 CHMP4AQ9BY43 222 aa16.08■□□□□ 0.16
PCDHA11-202ENST00000616325 LRRCC1Q9C099 1032 aa16.08■□□□□ 0.16
PCDHA11-202ENST00000616325 PNPLA6Q8IY17 1366 aa16.08■□□□□ 0.16
PCDHA11-202ENST00000616325 PPLO60437 1756 aa16.08■□□□□ 0.16
PCDHA11-202ENST00000616325 GNAI2P04899 355 aa16.08■□□□□ 0.16
PCDHA11-202ENST00000616325 MX1P20591 662 aa16.08■□□□□ 0.16
PCDHA11-202ENST00000616325 ZC3H13Q5T200 1668 aaKnown RBP16.08■□□□□ 0.16
PCDHA11-202ENST00000616325 OSCARQ8IYS5 282 aa16.07■□□□□ 0.16
PCDHA11-202ENST00000616325 MYO3AQ8NEV4 1616 aa16.07■□□□□ 0.16
PCDHA11-202ENST00000616325 SURF6O75683 361 aaKnown RBP16.07■□□□□ 0.16
PCDHA11-202ENST00000616325 NCBP3Q53F19 620 aaKnown RBP16.07■□□□□ 0.16
PCDHA11-202ENST00000616325 ABCA9Q8IUA7 1624 aa16.07■□□□□ 0.16
PCDHA11-202ENST00000616325 PTCH1Q13635 1447 aa16.07■□□□□ 0.16
PCDHA11-202ENST00000616325 BRD1O95696 1058 aa16.07■□□□□ 0.16
PCDHA11-202ENST00000616325 CAMK4Q16566 473 aa16.07■□□□□ 0.16
PCDHA11-202ENST00000616325 KDM4AO75164 1064 aa16.06■□□□□ 0.16
PCDHA11-202ENST00000616325 MTHFSDQ2M296 383 aaKnown RBP16.06■□□□□ 0.16
PCDHA11-202ENST00000616325 SPG7Q9UQ90 795 aa16.06■□□□□ 0.16
PCDHA11-202ENST00000616325 PTGS1P23219 599 aa16.06■□□□□ 0.16
PCDHA11-202ENST00000616325 NGDNQ8NEJ9 315 aaKnown RBP16.06■□□□□ 0.16
PCDHA11-202ENST00000616325 TMEM51Q9NW97 253 aa16.06■□□□□ 0.16
PCDHA11-202ENST00000616325 FAM69CQ0P6D2 419 aa16.06■□□□□ 0.16
PCDHA11-202ENST00000616325 FAM184AQ8NB25 1140 aa16.06■□□□□ 0.16
PCDHA11-202ENST00000616325 ARHGEF28Q8N1W1 1705 aaKnown RBP16.06■□□□□ 0.16
PCDHA11-202ENST00000616325 PTPRMP28827 1452 aa16.05■□□□□ 0.16
PCDHA11-202ENST00000616325 NEXMIFQ5QGS0 1516 aa16.05■□□□□ 0.16
PCDHA11-202ENST00000616325 CFAP74Q9C0B2 1584 aa16.05■□□□□ 0.16
PCDHA11-202ENST00000616325 CCDC183Q5T5S1 534 aa16.05■□□□□ 0.16
PCDHA11-202ENST00000616325 CWC27Q6UX04 472 aaKnown RBP16.05■□□□□ 0.16
PCDHA11-202ENST00000616325 TAOK2Q9UL54 1235 aa16.05■□□□□ 0.16
PCDHA11-202ENST00000616325 ESYT1Q9BSJ8 1104 aa16.05■□□□□ 0.16
PCDHA11-202ENST00000616325 IFT172Q9UG01 1749 aa16.05■□□□□ 0.16
PCDHA11-202ENST00000616325 LRMPQ12912 555 aa16.04■□□□□ 0.16
PCDHA11-202ENST00000616325 IL25Q9H293 177 aa16.04■□□□□ 0.16
PCDHA11-202ENST00000616325 ZFYVE9O95405 1425 aa16.04■□□□□ 0.16
PCDHA11-202ENST00000616325 CHL1O00533 1208 aa16.04■□□□□ 0.16
PCDHA11-202ENST00000616325 BRPF1P55201 1214 aaPredicted RBP16.04■□□□□ 0.16
PCDHA11-202ENST00000616325 MED14O60244 1454 aa16.03■□□□□ 0.16
PCDHA11-202ENST00000616325 ACEP12821 1306 aa16.03■□□□□ 0.16
PCDHA11-202ENST00000616325 GOLGA6L6A8MZA4 724 aa16.03■□□□□ 0.16
PCDHA11-202ENST00000616325 HAP1P54257 671 aaPredicted RBP16.03■□□□□ 0.16
PCDHA11-202ENST00000616325 FLIIQ13045 1269 aa16.03■□□□□ 0.16
PCDHA11-202ENST00000616325 RBM33Q96EV2 1170 aaKnown RBP16.03■□□□□ 0.16
PCDHA11-202ENST00000616325 VPS37CA5D8V6 355 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms