RNA–Protein interactions for RNA: ENST00000616094.1

CREB3L1-205, Transcript of cAMP responsive element binding protein 3 like 1, humanhuman

TSL 1 (best)

Gene CREB3L1, Length 1,817 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L1-205ENST00000616094 USP54Q70EL1 1684 aa16.5■□□□□ 0.23
CREB3L1-205ENST00000616094 PTPRUQ92729 1446 aa16.5■□□□□ 0.23
CREB3L1-205ENST00000616094 MTHFSDQ2M296 383 aaKnown RBP16.49■□□□□ 0.23
CREB3L1-205ENST00000616094 CAVIN1Q6NZI2 390 aaKnown RBP16.49■□□□□ 0.23
CREB3L1-205ENST00000616094 F6X3S4 739 aa16.48■□□□□ 0.23
CREB3L1-205ENST00000616094 MCM2P49736 904 aa16.48■□□□□ 0.23
CREB3L1-205ENST00000616094 RTF1Q92541 710 aaKnown RBP16.48■□□□□ 0.23
CREB3L1-205ENST00000616094 ESYT1Q9BSJ8 1104 aa16.48■□□□□ 0.23
CREB3L1-205ENST00000616094 ESF1Q9H501 851 aaKnown RBP16.48■□□□□ 0.23
CREB3L1-205ENST00000616094 MARF1Q9Y4F3 1742 aaKnown RBP16.48■□□□□ 0.23
CREB3L1-205ENST00000616094 IGSF1Q8N6C5 1336 aa16.48■□□□□ 0.23
CREB3L1-205ENST00000616094 FOXO3O43524 673 aa16.47■□□□□ 0.23
CREB3L1-205ENST00000616094 SLC4A10Q6U841 1118 aa16.47■□□□□ 0.23
CREB3L1-205ENST00000616094 ZSCAN30Q86W11 494 aa16.47■□□□□ 0.23
CREB3L1-205ENST00000616094 MIS18AQ9NYP9 233 aa16.47■□□□□ 0.23
CREB3L1-205ENST00000616094 HTATSF1O43719 755 aaKnown RBP16.47■□□□□ 0.23
CREB3L1-205ENST00000616094 NCLP19338 710 aaKnown RBP16.47■□□□□ 0.23
CREB3L1-205ENST00000616094 GPT2Q8TD30 523 aa16.47■□□□□ 0.23
CREB3L1-205ENST00000616094 IL17RAQ96F46 866 aa16.47■□□□□ 0.23
CREB3L1-205ENST00000616094 SOS1Q07889 1333 aaPredicted RBP16.46■□□□□ 0.23
CREB3L1-205ENST00000616094 DIP2AQ14689 1571 aa16.46■□□□□ 0.23
CREB3L1-205ENST00000616094 RGPD8O14715 1765 aaPredicted RBP16.46■□□□□ 0.23
CREB3L1-205ENST00000616094 GNAI3P08754 354 aa16.46■□□□□ 0.23
CREB3L1-205ENST00000616094 MCCP23508 829 aa16.46■□□□□ 0.23
CREB3L1-205ENST00000616094 HS1BP3Q53T59 392 aa16.46■□□□□ 0.23
CREB3L1-205ENST00000616094 STK31Q9BXU1 1019 aa16.46■□□□□ 0.23
CREB3L1-205ENST00000616094 ANAPC15P60006 121 aa16.45■□□□□ 0.22
CREB3L1-205ENST00000616094 CUL4AQ13619 759 aa16.45■□□□□ 0.22
CREB3L1-205ENST00000616094 LRRCC1Q9C099 1032 aa16.45■□□□□ 0.22
CREB3L1-205ENST00000616094 EXOC6BQ9Y2D4 811 aa16.45■□□□□ 0.22
CREB3L1-205ENST00000616094 NWD1Q149M9 1564 aa16.45■□□□□ 0.22
CREB3L1-205ENST00000616094 AOX1Q06278 1338 aa16.45■□□□□ 0.22
CREB3L1-205ENST00000616094 PRPF40AO75400 957 aaKnown RBP16.45■□□□□ 0.22
CREB3L1-205ENST00000616094 TPM2P07951 284 aa16.45■□□□□ 0.22
CREB3L1-205ENST00000616094 MX1P20591 662 aa16.45■□□□□ 0.22
CREB3L1-205ENST00000616094 ATP8B2P98198 1209 aa16.45■□□□□ 0.22
CREB3L1-205ENST00000616094 TMX3Q96JJ7 454 aa16.45■□□□□ 0.22
CREB3L1-205ENST00000616094 RBSNQ9H1K0 784 aa16.45■□□□□ 0.22
CREB3L1-205ENST00000616094 STAP2Q9UGK3 403 aa16.45■□□□□ 0.22
CREB3L1-205ENST00000616094 FLIIQ13045 1269 aa16.44■□□□□ 0.22
CREB3L1-205ENST00000616094 PDLIM2Q96JY6 352 aa16.44■□□□□ 0.22
CREB3L1-205ENST00000616094 BRD1O95696 1058 aa16.43■□□□□ 0.22
CREB3L1-205ENST00000616094 NEK4P51957 841 aa16.43■□□□□ 0.22
CREB3L1-205ENST00000616094 CCDC30Q5VVM6 783 aa16.43■□□□□ 0.22
CREB3L1-205ENST00000616094 MBD3O95983 291 aa16.42■□□□□ 0.22
CREB3L1-205ENST00000616094 CHMLP26374 656 aa16.42■□□□□ 0.22
CREB3L1-205ENST00000616094 EYA1Q99502 592 aa16.42■□□□□ 0.22
CREB3L1-205ENST00000616094 SRCIN1Q9C0H9 1055 aa16.42■□□□□ 0.22
CREB3L1-205ENST00000616094 RBM27Q9P2N5 1060 aaKnown RBP16.42■□□□□ 0.22
CREB3L1-205ENST00000616094 EPB41L2O43491 1005 aaKnown RBP16.42■□□□□ 0.22
CREB3L1-205ENST00000616094 LRSAM1Q6UWE0 723 aa16.42■□□□□ 0.22
CREB3L1-205ENST00000616094 INTS4Q96HW7 963 aaKnown RBP16.42■□□□□ 0.22
CREB3L1-205ENST00000616094 PNMA6EA0A0J9YXQ4 647 aa16.41■□□□□ 0.22
CREB3L1-205ENST00000616094 NUTM2FA1L443 756 aa16.41■□□□□ 0.22
CREB3L1-205ENST00000616094 SOX12O15370 315 aa16.41■□□□□ 0.22
CREB3L1-205ENST00000616094 RRP9O43818 475 aaKnown RBP16.41■□□□□ 0.22
CREB3L1-205ENST00000616094 PRIM1P49642 420 aaKnown RBP16.41■□□□□ 0.22
CREB3L1-205ENST00000616094 TSHZ3Q63HK5 1081 aa16.41■□□□□ 0.22
CREB3L1-205ENST00000616094 BABAM1Q9NWV8 329 aa16.41■□□□□ 0.22
CREB3L1-205ENST00000616094 PALD1Q9ULE6 856 aa16.41■□□□□ 0.22
CREB3L1-205ENST00000616094 CRYBG1Q9Y4K1 1723 aa16.41■□□□□ 0.22
CREB3L1-205ENST00000616094 FKBP5Q13451 457 aaPredicted RBP16.4■□□□□ 0.22
CREB3L1-205ENST00000616094 TMEM63CQ9P1W3 806 aa16.4■□□□□ 0.22
CREB3L1-205ENST00000616094 SLIT1O75093 1534 aa16.4■□□□□ 0.22
CREB3L1-205ENST00000616094 OFD1O75665 1012 aa16.4■□□□□ 0.22
CREB3L1-205ENST00000616094 MSNP26038 577 aaKnown RBP16.4■□□□□ 0.22
CREB3L1-205ENST00000616094 LTKP29376 864 aa16.4■□□□□ 0.22
CREB3L1-205ENST00000616094 AMPHP49418 695 aa16.4■□□□□ 0.22
CREB3L1-205ENST00000616094 MAP3K5Q99683 1374 aa16.4■□□□□ 0.22
CREB3L1-205ENST00000616094 ARHGAP23Q9P227 1491 aa16.39■□□□□ 0.21
CREB3L1-205ENST00000616094 MED1Q15648 1581 aaPredicted RBP16.38■□□□□ 0.21
CREB3L1-205ENST00000616094 GNAT3A8MTJ3 354 aa16.38■□□□□ 0.21
CREB3L1-205ENST00000616094 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.38■□□□□ 0.21
CREB3L1-205ENST00000616094 ANO2Q9NQ90 1003 aa16.38■□□□□ 0.21
CREB3L1-205ENST00000616094 LRRFIP2Q9Y608 721 aaKnown RBP16.38■□□□□ 0.21
CREB3L1-205ENST00000616094 TRIM6-TRIM34B2RNG4 842 aa16.38■□□□□ 0.21
CREB3L1-205ENST00000616094 NOL7Q9UMY1 257 aaKnown RBP16.38■□□□□ 0.21
CREB3L1-205ENST00000616094 KDM3BQ7LBC6 1761 aa16.37■□□□□ 0.21
CREB3L1-205ENST00000616094 ANKARQ7Z5J8 1434 aa16.37■□□□□ 0.21
CREB3L1-205ENST00000616094 RILPL2Q969X0 211 aa16.37■□□□□ 0.21
CREB3L1-205ENST00000616094 CHAMP1Q96JM3 812 aa16.37■□□□□ 0.21
CREB3L1-205ENST00000616094 NSFL1CQ9UNZ2 370 aaKnown RBP16.37■□□□□ 0.21
CREB3L1-205ENST00000616094 SSH3Q8TE77 659 aa16.36■□□□□ 0.21
CREB3L1-205ENST00000616094 SYCE3A1L190 88 aa16.35■□□□□ 0.21
CREB3L1-205ENST00000616094 ZNF500O60304 480 aaPredicted RBP16.35■□□□□ 0.21
CREB3L1-205ENST00000616094 RAB11FIP3O75154 756 aa16.35■□□□□ 0.21
CREB3L1-205ENST00000616094 TERF1P54274 439 aa16.35■□□□□ 0.21
CREB3L1-205ENST00000616094 HSP90AA2PQ14568 343 aaPredicted RBP16.35■□□□□ 0.21
CREB3L1-205ENST00000616094 KIAA1211Q6ZU35 1233 aa16.35■□□□□ 0.21
CREB3L1-205ENST00000616094 FOXD4L5Q5VV16 416 aaPredicted RBP16.35■□□□□ 0.21
CREB3L1-205ENST00000616094 UNC5CLQ8IV45 518 aa16.35■□□□□ 0.21
CREB3L1-205ENST00000616094 NGDNQ8NEJ9 315 aaKnown RBP16.35■□□□□ 0.21
CREB3L1-205ENST00000616094 FOXD4L4Q8WXT5 416 aaPredicted RBP16.35■□□□□ 0.21
CREB3L1-205ENST00000616094 USP44Q9H0E7 712 aa16.35■□□□□ 0.21
CREB3L1-205ENST00000616094 PLEKHG5O94827 1062 aa16.34■□□□□ 0.21
CREB3L1-205ENST00000616094 UBTFL1P0CB47 393 aaPredicted RBP16.34■□□□□ 0.21
CREB3L1-205ENST00000616094 HOXC9P31274 260 aa16.34■□□□□ 0.21
CREB3L1-205ENST00000616094 HSPA4P34932 840 aa16.34■□□□□ 0.21
CREB3L1-205ENST00000616094 SYAP1Q96A49 352 aaPredicted RBP16.34■□□□□ 0.21
CREB3L1-205ENST00000616094 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms