RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 PLEKHM2Q8IWE5 1019 aa16.94■□□□□ 0.3
SSBP2-220ENST00000615665 MYL6BP14649 208 aa16.94■□□□□ 0.3
SSBP2-220ENST00000615665 DRC7Q8IY82 874 aa16.93■□□□□ 0.3
SSBP2-220ENST00000615665 KIF3AQ9Y496 699 aa16.93■□□□□ 0.3
SSBP2-220ENST00000615665 NEURL4Q96JN8 1562 aa16.93■□□□□ 0.3
SSBP2-220ENST00000615665 MBD3O95983 291 aa16.93■□□□□ 0.3
SSBP2-220ENST00000615665 ALKQ9UM73 1620 aa16.93■□□□□ 0.3
SSBP2-220ENST00000615665 MSH6P52701 1360 aa16.93■□□□□ 0.3
SSBP2-220ENST00000615665 ABCC4O15439 1325 aa16.93■□□□□ 0.3
SSBP2-220ENST00000615665 HIP1O00291 1037 aa16.93■□□□□ 0.3
SSBP2-220ENST00000615665 SSFA2P28290 1259 aa16.92■□□□□ 0.3
SSBP2-220ENST00000615665 TSHZ3Q63HK5 1081 aa16.92■□□□□ 0.3
SSBP2-220ENST00000615665 DBF4Q9UBU7 674 aaPredicted RBP16.92■□□□□ 0.3
SSBP2-220ENST00000615665 A2ML1A8K2U0 1454 aa16.92■□□□□ 0.3
SSBP2-220ENST00000615665 PRKCSHP14314 528 aaPredicted RBP16.92■□□□□ 0.3
SSBP2-220ENST00000615665 SIL1Q9H173 461 aa16.92■□□□□ 0.3
SSBP2-220ENST00000615665 NEXMIFQ5QGS0 1516 aa16.92■□□□□ 0.3
SSBP2-220ENST00000615665 H3BQV1 296 aa16.92■□□□□ 0.3
SSBP2-220ENST00000615665 HOXC9P31274 260 aa16.92■□□□□ 0.3
SSBP2-220ENST00000615665 IFFO2Q5TF58 517 aa16.92■□□□□ 0.3
SSBP2-220ENST00000615665 AACSQ86V21 672 aa16.92■□□□□ 0.3
SSBP2-220ENST00000615665 PDE1AP54750 535 aa16.92■□□□□ 0.3
SSBP2-220ENST00000615665 FAM184AQ8NB25 1140 aa16.92■□□□□ 0.3
SSBP2-220ENST00000615665 CWC27Q6UX04 472 aaKnown RBP16.91■□□□□ 0.3
SSBP2-220ENST00000615665 FAM43AQ8N2R8 423 aa16.91■□□□□ 0.3
SSBP2-220ENST00000615665 RBM25P49756 843 aaKnown RBP16.91■□□□□ 0.3
SSBP2-220ENST00000615665 MAP3K5Q99683 1374 aa16.91■□□□□ 0.3
SSBP2-220ENST00000615665 PSMA5P28066 241 aa16.9■□□□□ 0.3
SSBP2-220ENST00000615665 NEUROD6Q96NK8 337 aa16.9■□□□□ 0.3
SSBP2-220ENST00000615665 RBM42Q9BTD8 480 aaKnown RBP16.9■□□□□ 0.3
SSBP2-220ENST00000615665 PI4KAP2A4QPH2 592 aa16.9■□□□□ 0.3
SSBP2-220ENST00000615665 G2E3Q7L622 706 aa16.9■□□□□ 0.3
SSBP2-220ENST00000615665 PI4KAP1Q8N8J0 262 aa16.9■□□□□ 0.3
SSBP2-220ENST00000615665 PPP1R42Q7Z4L9 355 aa16.9■□□□□ 0.3
SSBP2-220ENST00000615665 GOLGA6L6A8MZA4 724 aa16.9■□□□□ 0.3
SSBP2-220ENST00000615665 GLRX3O76003 335 aaKnown RBP16.9■□□□□ 0.3
SSBP2-220ENST00000615665 CABP4P57796 275 aa16.9■□□□□ 0.3
SSBP2-220ENST00000615665 UPF3BQ9BZI7 483 aaKnown RBP16.9■□□□□ 0.3
SSBP2-220ENST00000615665 GNL2Q13823 731 aaKnown RBP16.89■□□□□ 0.29
SSBP2-220ENST00000615665 LRRFIP1Q32MZ4 808 aaKnown RBP16.89■□□□□ 0.29
SSBP2-220ENST00000615665 ADGRB1O14514 1584 aa16.89■□□□□ 0.29
SSBP2-220ENST00000615665 BRPF1P55201 1214 aaPredicted RBP16.89■□□□□ 0.29
SSBP2-220ENST00000615665 ATP8B2P98198 1209 aa16.89■□□□□ 0.29
SSBP2-220ENST00000615665 MROH2AA6NES4 1674 aa16.89■□□□□ 0.29
SSBP2-220ENST00000615665 PRR36Q9H6K5 1346 aa16.89■□□□□ 0.29
SSBP2-220ENST00000615665 ROBO2Q9HCK4 1378 aa16.88■□□□□ 0.29
SSBP2-220ENST00000615665 CDK12Q9NYV4 1490 aaPredicted RBP16.88■□□□□ 0.29
SSBP2-220ENST00000615665 KIAA0232Q92628 1395 aa16.88■□□□□ 0.29
SSBP2-220ENST00000615665 ARHGEF10O15013 1369 aa16.88■□□□□ 0.29
SSBP2-220ENST00000615665 ANXA1P04083 346 aa16.88■□□□□ 0.29
SSBP2-220ENST00000615665 WDR33Q9C0J8 1336 aaKnown RBP16.88■□□□□ 0.29
SSBP2-220ENST00000615665 ANKRD24Q8TF21 1146 aa16.88■□□□□ 0.29
SSBP2-220ENST00000615665 CYP46A1Q9Y6A2 500 aa16.88■□□□□ 0.29
SSBP2-220ENST00000615665 MED14O60244 1454 aa16.88■□□□□ 0.29
SSBP2-220ENST00000615665 NPHP1O15259 732 aa16.87■□□□□ 0.29
SSBP2-220ENST00000615665 CHAF1AQ13111 956 aaPredicted RBP16.87■□□□□ 0.29
SSBP2-220ENST00000615665 KRT28Q7Z3Y7 464 aa16.87■□□□□ 0.29
SSBP2-220ENST00000615665 CHPF2Q9P2E5 772 aa16.87■□□□□ 0.29
SSBP2-220ENST00000615665 KIF24Q5T7B8 1368 aa16.87■□□□□ 0.29
SSBP2-220ENST00000615665 DNAJC2Q99543 621 aaKnown RBP16.86■□□□□ 0.29
SSBP2-220ENST00000615665 HYPKQ9NX55 129 aa16.86■□□□□ 0.29
SSBP2-220ENST00000615665 PLEKHG1Q9ULL1 1385 aa16.86■□□□□ 0.29
SSBP2-220ENST00000615665 PTPRMP28827 1452 aa16.86■□□□□ 0.29
SSBP2-220ENST00000615665 ZNF853P0CG23 659 aa16.86■□□□□ 0.29
SSBP2-220ENST00000615665 LARP1Q6PKG0 1096 aaKnown RBP16.86■□□□□ 0.29
SSBP2-220ENST00000615665 CHMP4CQ96CF2 233 aa16.86■□□□□ 0.29
SSBP2-220ENST00000615665 MAP3K2Q9Y2U5 619 aa16.86■□□□□ 0.29
SSBP2-220ENST00000615665 MROH1Q8NDA8 1641 aa16.85■□□□□ 0.29
SSBP2-220ENST00000615665 RNF214Q8ND24 703 aa16.85■□□□□ 0.29
SSBP2-220ENST00000615665 OTUD7AQ8TE49 926 aaPredicted RBP16.85■□□□□ 0.29
SSBP2-220ENST00000615665 PNPLA6Q8IY17 1366 aa16.85■□□□□ 0.29
SSBP2-220ENST00000615665 SOS1Q07889 1333 aaPredicted RBP16.85■□□□□ 0.29
SSBP2-220ENST00000615665 AKAP4Q5JQC9 854 aa16.85■□□□□ 0.29
SSBP2-220ENST00000615665 RHPN1Q8TCX5 695 aa16.84■□□□□ 0.29
SSBP2-220ENST00000615665 PIK3C2BO00750 1634 aa16.84■□□□□ 0.29
SSBP2-220ENST00000615665 CDK11BP21127 795 aaKnown RBP16.84■□□□□ 0.29
SSBP2-220ENST00000615665 CCDC173Q0VFZ6 552 aa16.84■□□□□ 0.29
SSBP2-220ENST00000615665 IP6K1Q92551 441 aa16.84■□□□□ 0.29
SSBP2-220ENST00000615665 TOM1L2Q6ZVM7 507 aa16.84■□□□□ 0.29
SSBP2-220ENST00000615665 LRRC59Q96AG4 307 aaKnown RBP16.84■□□□□ 0.29
SSBP2-220ENST00000615665 JAKMIP1Q96N16 626 aaKnown RBP16.84■□□□□ 0.29
SSBP2-220ENST00000615665 BAG4O95429 457 aaKnown RBP16.84■□□□□ 0.29
SSBP2-220ENST00000615665 NRDCO43847 1150 aa16.83■□□□□ 0.28
SSBP2-220ENST00000615665 ESYT1Q9BSJ8 1104 aa16.83■□□□□ 0.28
SSBP2-220ENST00000615665 PRDM11Q9NQV5 511 aa16.83■□□□□ 0.28
SSBP2-220ENST00000615665 ZC3H13Q5T200 1668 aaKnown RBP16.83■□□□□ 0.28
SSBP2-220ENST00000615665 USP6P35125 1406 aa16.83■□□□□ 0.28
SSBP2-220ENST00000615665 IQSEC2Q5JU85 1478 aa16.83■□□□□ 0.28
SSBP2-220ENST00000615665 FIBPO43427 364 aa16.82■□□□□ 0.28
SSBP2-220ENST00000615665 PDRG1Q9NUG6 133 aa16.82■□□□□ 0.28
SSBP2-220ENST00000615665 FRMPD1Q5SYB0 1578 aa16.82■□□□□ 0.28
SSBP2-220ENST00000615665 PPLO60437 1756 aa16.82■□□□□ 0.28
SSBP2-220ENST00000615665 ARHGEF40Q8TER5 1519 aa16.82■□□□□ 0.28
SSBP2-220ENST00000615665 USP26Q9BXU7 913 aa16.82■□□□□ 0.28
SSBP2-220ENST00000615665 CASTP20810 708 aaKnown RBP16.82■□□□□ 0.28
SSBP2-220ENST00000615665 PDCP20941 246 aa16.82■□□□□ 0.28
SSBP2-220ENST00000615665 BABAM1Q9NWV8 329 aa16.82■□□□□ 0.28
SSBP2-220ENST00000615665 SYTL4Q96C24 671 aaPredicted RBP16.81■□□□□ 0.28
SSBP2-220ENST00000615665 SF3A1Q15459 793 aaKnown RBP16.81■□□□□ 0.28
SSBP2-220ENST00000615665 MYD88Q99836 296 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms