RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 MCM10Q7L590 875 aa17.44■□□□□ 0.38
MDC1-209ENST00000613547 BTAF1O14981 1849 aa17.44■□□□□ 0.38
MDC1-209ENST00000613547 APAF1O14727 1248 aa17.43■□□□□ 0.38
MDC1-209ENST00000613547 RRP7AQ9Y3A4 280 aaKnown RBP17.43■□□□□ 0.38
MDC1-209ENST00000613547 RGPD3A6NKT7 1758 aaPredicted RBP17.43■□□□□ 0.38
MDC1-209ENST00000613547 RGPD4Q7Z3J3 1758 aa17.43■□□□□ 0.38
MDC1-209ENST00000613547 ATG3Q9NT62 314 aa17.42■□□□□ 0.38
MDC1-209ENST00000613547 ASAP1Q9ULH1 1129 aa17.42■□□□□ 0.38
MDC1-209ENST00000613547 ADAMTS7Q9UKP4 1686 aa17.42■□□□□ 0.38
MDC1-209ENST00000613547 KAT6BQ8WYB5 2073 aa17.41■□□□□ 0.38
MDC1-209ENST00000613547 DCTN1Q14203 1278 aa17.41■□□□□ 0.38
MDC1-209ENST00000613547 TTC5Q8N0Z6 440 aa17.41■□□□□ 0.38
MDC1-209ENST00000613547 CCNL1Q9UK58 526 aaPredicted RBP17.41■□□□□ 0.38
MDC1-209ENST00000613547 SCN11AQ9UI33 1791 aa17.4■□□□□ 0.38
MDC1-209ENST00000613547 NBPF14Q5TI25 921 aa17.4■□□□□ 0.38
MDC1-209ENST00000613547 ITGB4P16144 1822 aa17.4■□□□□ 0.38
MDC1-209ENST00000613547 BTBD11A6QL63 1104 aa17.39■□□□□ 0.37
MDC1-209ENST00000613547 PROM2Q8N271 834 aa17.39■□□□□ 0.37
MDC1-209ENST00000613547 RBM42Q9BTD8 480 aaKnown RBP17.39■□□□□ 0.37
MDC1-209ENST00000613547 LOC102724428A0A0B4J2F2 783 aa17.38■□□□□ 0.37
MDC1-209ENST00000613547 SIK1P57059 783 aa17.38■□□□□ 0.37
MDC1-209ENST00000613547 CALD1Q05682 793 aaKnown RBP17.38■□□□□ 0.37
MDC1-209ENST00000613547 TAF7Q15545 349 aaPredicted RBP17.38■□□□□ 0.37
MDC1-209ENST00000613547 PTCD1O75127 700 aaKnown RBP17.37■□□□□ 0.37
MDC1-209ENST00000613547 ATP6V1AP38606 617 aa17.36■□□□□ 0.37
MDC1-209ENST00000613547 SLC39A6Q13433 755 aa17.36■□□□□ 0.37
MDC1-209ENST00000613547 NCBP3Q53F19 620 aaKnown RBP17.36■□□□□ 0.37
MDC1-209ENST00000613547 ZNF790Q6PG37 636 aa17.36■□□□□ 0.37
MDC1-209ENST00000613547 NGEFQ8N5V2 710 aa17.36■□□□□ 0.37
MDC1-209ENST00000613547 THUMPD2Q9BTF0 503 aaKnown RBP17.36■□□□□ 0.37
MDC1-209ENST00000613547 TRIM35Q9UPQ4 493 aa17.36■□□□□ 0.37
MDC1-209ENST00000613547 RREB1Q92766 1687 aa17.36■□□□□ 0.37
MDC1-209ENST00000613547 LRRC4BQ9NT99 713 aa17.35■□□□□ 0.37
MDC1-209ENST00000613547 STK32BQ9NY57 414 aa17.35■□□□□ 0.37
MDC1-209ENST00000613547 CCDC27Q2M243 656 aa17.34■□□□□ 0.37
MDC1-209ENST00000613547 KCNQ4P56696 695 aa17.33■□□□□ 0.36
MDC1-209ENST00000613547 FMNL2Q96PY5 1086 aa17.33■□□□□ 0.36
MDC1-209ENST00000613547 BABAM1Q9NWV8 329 aa17.33■□□□□ 0.36
MDC1-209ENST00000613547 LY75O60449 1722 aa17.33■□□□□ 0.36
MDC1-209ENST00000613547 VSIG10Q8N0Z9 540 aa17.32■□□□□ 0.36
MDC1-209ENST00000613547 TSPYL4Q9UJ04 414 aa17.32■□□□□ 0.36
MDC1-209ENST00000613547 DLG5Q8TDM6 1919 aa17.31■□□□□ 0.36
MDC1-209ENST00000613547 NUP188Q5SRE5 1749 aa17.31■□□□□ 0.36
MDC1-209ENST00000613547 PAPPAQ13219 1627 aa17.31■□□□□ 0.36
MDC1-209ENST00000613547 SENP3-EIF4A1A0A087X0R7 540 aa17.3■□□□□ 0.36
MDC1-209ENST00000613547 ITPK1Q13572 414 aa17.3■□□□□ 0.36
MDC1-209ENST00000613547 SLC15A2Q16348 729 aa17.3■□□□□ 0.36
MDC1-209ENST00000613547 WWC1Q8IX03 1113 aa17.3■□□□□ 0.36
MDC1-209ENST00000613547 ZNF496Q96IT1 587 aaPredicted RBP17.3■□□□□ 0.36
MDC1-209ENST00000613547 AK7Q96M32 723 aa17.3■□□□□ 0.36
MDC1-209ENST00000613547 TEX13AQ9BXU3 409 aaPredicted RBP17.3■□□□□ 0.36
MDC1-209ENST00000613547 ANO8Q9HCE9 1232 aaPredicted RBP17.3■□□□□ 0.36
MDC1-209ENST00000613547 MIS18AQ9NYP9 233 aa17.3■□□□□ 0.36
MDC1-209ENST00000613547 SALL2Q9Y467 1007 aaPredicted RBP17.3■□□□□ 0.36
MDC1-209ENST00000613547 LAS1LQ9Y4W2 734 aaKnown RBP17.3■□□□□ 0.36
MDC1-209ENST00000613547 KCPQ6ZWJ8 1503 aa17.3■□□□□ 0.36
MDC1-209ENST00000613547 HEG1Q9ULI3 1381 aa17.29■□□□□ 0.36
MDC1-209ENST00000613547 GNAI1P63096 354 aa17.29■□□□□ 0.36
MDC1-209ENST00000613547 R3HDM1Q15032 1099 aaKnown RBP17.29■□□□□ 0.36
MDC1-209ENST00000613547 SLC4A9Q96Q91 983 aa17.29■□□□□ 0.36
MDC1-209ENST00000613547 TFCP2L1Q9NZI6 479 aa17.29■□□□□ 0.36
MDC1-209ENST00000613547 SIPA1L3O60292 1781 aaPredicted RBP17.29■□□□□ 0.36
MDC1-209ENST00000613547 VIRMAQ69YN4 1812 aaKnown RBP17.28■□□□□ 0.36
MDC1-209ENST00000613547 CHL1O00533 1208 aa17.28■□□□□ 0.36
MDC1-209ENST00000613547 STARD3NLO95772 234 aa17.28■□□□□ 0.36
MDC1-209ENST00000613547 LINC00116Q8NCU8 138 aa17.28■□□□□ 0.36
MDC1-209ENST00000613547 AKT1S1Q96B36 256 aa17.28■□□□□ 0.36
MDC1-209ENST00000613547 CFAP44Q96MT7 982 aa17.28■□□□□ 0.36
MDC1-209ENST00000613547 IFT57Q9NWB7 429 aa17.28■□□□□ 0.36
MDC1-209ENST00000613547 ZNF831Q5JPB2 1677 aa17.27■□□□□ 0.36
MDC1-209ENST00000613547 KCNQ3O43525 872 aa17.27■□□□□ 0.36
MDC1-209ENST00000613547 SNRPA1P09661 255 aaKnown RBP17.27■□□□□ 0.36
MDC1-209ENST00000613547 DNAJC10Q8IXB1 793 aa17.27■□□□□ 0.36
MDC1-209ENST00000613547 IL16Q14005 1332 aa17.26■□□□□ 0.35
MDC1-209ENST00000613547 CNTNAP4Q9C0A0 1308 aa17.26■□□□□ 0.35
MDC1-209ENST00000613547 PSDA5PKW4 1024 aaPredicted RBP17.26■□□□□ 0.35
MDC1-209ENST00000613547 ZNF827Q17R98 1081 aa17.26■□□□□ 0.35
MDC1-209ENST00000613547 RC3H1Q5TC82 1133 aaKnown RBP17.26■□□□□ 0.35
MDC1-209ENST00000613547 WDR63Q8IWG1 891 aa17.26■□□□□ 0.35
MDC1-209ENST00000613547 C5P01031 1676 aa17.26■□□□□ 0.35
MDC1-209ENST00000613547 GNPATO15228 680 aa17.25■□□□□ 0.35
MDC1-209ENST00000613547 CRKLP46109 303 aaKnown RBP17.25■□□□□ 0.35
MDC1-209ENST00000613547 EIF4A1P60842 406 aaKnown RBP17.25■□□□□ 0.35
MDC1-209ENST00000613547 FLAD1Q8NFF5 587 aa17.25■□□□□ 0.35
MDC1-209ENST00000613547 UBR2Q8IWV8 1755 aa17.25■□□□□ 0.35
MDC1-209ENST00000613547 CYP19A1P11511 503 aaPredicted RBP17.24■□□□□ 0.35
MDC1-209ENST00000613547 CCDC87Q9NVE4 849 aa17.24■□□□□ 0.35
MDC1-209ENST00000613547 RTCBQ9Y3I0 505 aaKnown RBP17.24■□□□□ 0.35
MDC1-209ENST00000613547 CICQ96RK0 1608 aaPredicted RBP17.24■□□□□ 0.35
MDC1-209ENST00000613547 ZNF853P0CG23 659 aa17.23■□□□□ 0.35
MDC1-209ENST00000613547 MBIPQ9NS73 344 aa17.23■□□□□ 0.35
MDC1-209ENST00000613547 C4BP0C0L5 1744 aa17.23■□□□□ 0.35
MDC1-209ENST00000613547 MSH5O43196 834 aa17.22■□□□□ 0.35
MDC1-209ENST00000613547 RPS6KA4O75676 772 aa17.22■□□□□ 0.35
MDC1-209ENST00000613547 SSFA2P28290 1259 aa17.22■□□□□ 0.35
MDC1-209ENST00000613547 KDM3BQ7LBC6 1761 aa17.22■□□□□ 0.35
MDC1-209ENST00000613547 GIGYF1O75420 1035 aaPredicted RBP17.21■□□□□ 0.35
MDC1-209ENST00000613547 PHF14O94880 888 aa17.21■□□□□ 0.35
MDC1-209ENST00000613547 NPM2Q86SE8 214 aaKnown RBP17.21■□□□□ 0.35
MDC1-209ENST00000613547 MYH16Q9H6N6 1097 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms