RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 GRPEL1Q9HAV7 217 aa20.45■□□□□ 0.86
CNOT3-208ENST00000613073 LGR6Q9HBX8 967 aa20.45■□□□□ 0.86
CNOT3-208ENST00000613073 ATF3P18847 181 aa20.45■□□□□ 0.86
CNOT3-208ENST00000613073 STK31Q9BXU1 1019 aa20.45■□□□□ 0.86
CNOT3-208ENST00000613073 RGPD2P0DJD1 1756 aa20.44■□□□□ 0.86
CNOT3-208ENST00000613073 ZC3H6P61129 1189 aaKnown RBP20.44■□□□□ 0.86
CNOT3-208ENST00000613073 TRIM44Q96DX7 344 aaPredicted RBP20.44■□□□□ 0.86
CNOT3-208ENST00000613073 MEIS3Q99687 375 aa20.44■□□□□ 0.86
CNOT3-208ENST00000613073 AXIN2Q9Y2T1 843 aa20.44■□□□□ 0.86
CNOT3-208ENST00000613073 TMEM94Q12767 1356 aa20.44■□□□□ 0.86
CNOT3-208ENST00000613073 TBC1D32Q96NH3 1257 aa20.43■□□□□ 0.86
CNOT3-208ENST00000613073 ANKRD24Q8TF21 1146 aa20.43■□□□□ 0.86
CNOT3-208ENST00000613073 MFAP1P55081 439 aaKnown RBP20.42■□□□□ 0.86
CNOT3-208ENST00000613073 CCDC30Q5VVM6 783 aa20.41■□□□□ 0.86
CNOT3-208ENST00000613073 ZNF530Q6P9A1 599 aaPredicted RBP20.41■□□□□ 0.86
CNOT3-208ENST00000613073 FKBP5Q13451 457 aaPredicted RBP20.4■□□□□ 0.86
CNOT3-208ENST00000613073 MPRIPQ6WCQ1 1025 aa20.4■□□□□ 0.86
CNOT3-208ENST00000613073 LRRC37A3O60309 1634 aa20.4■□□□□ 0.86
CNOT3-208ENST00000613073 APBB1O00213 710 aa20.39■□□□□ 0.85
CNOT3-208ENST00000613073 FLIIQ13045 1269 aa20.39■□□□□ 0.85
CNOT3-208ENST00000613073 CEP85Q6P2H3 762 aa20.39■□□□□ 0.85
CNOT3-208ENST00000613073 EIF2S2P20042 333 aaKnown RBP20.38■□□□□ 0.85
CNOT3-208ENST00000613073 ANKRD44Q8N8A2 993 aa20.38■□□□□ 0.85
CNOT3-208ENST00000613073 KCNQ3O43525 872 aa20.37■□□□□ 0.85
CNOT3-208ENST00000613073 PLEKHO1Q53GL0 409 aaPredicted RBP20.37■□□□□ 0.85
CNOT3-208ENST00000613073 CABLES1Q8TDN4 633 aa20.37■□□□□ 0.85
CNOT3-208ENST00000613073 DCTPP1Q9H773 170 aa20.37■□□□□ 0.85
CNOT3-208ENST00000613073 CHMP5Q9NZZ3 219 aa20.37■□□□□ 0.85
CNOT3-208ENST00000613073 SLIT3O75094 1523 aa20.37■□□□□ 0.85
CNOT3-208ENST00000613073 ATP10DQ9P241 1426 aa20.37■□□□□ 0.85
CNOT3-208ENST00000613073 RBM10P98175 930 aaKnown RBP20.36■□□□□ 0.85
CNOT3-208ENST00000613073 HDGFL1Q5TGJ6 251 aa20.36■□□□□ 0.85
CNOT3-208ENST00000613073 TRPM3Q9HCF6 1732 aaPredicted RBP20.36■□□□□ 0.85
CNOT3-208ENST00000613073 CEMIPQ8WUJ3 1361 aa20.36■□□□□ 0.85
CNOT3-208ENST00000613073 TEFQ10587 303 aa20.36■□□□□ 0.85
CNOT3-208ENST00000613073 STRCP1A6NGW2 1772 aa20.36■□□□□ 0.85
CNOT3-208ENST00000613073 AKAP4Q5JQC9 854 aa20.35■□□□□ 0.85
CNOT3-208ENST00000613073 KIAA1211Q6ZU35 1233 aa20.35■□□□□ 0.85
CNOT3-208ENST00000613073 MST1RQ04912 1400 aa20.35■□□□□ 0.85
CNOT3-208ENST00000613073 CCT4P50991 539 aaKnown RBP20.35■□□□□ 0.85
CNOT3-208ENST00000613073 GAS2L3Q86XJ1 694 aa20.35■□□□□ 0.85
CNOT3-208ENST00000613073 RPAP2Q8IXW5 612 aaPredicted RBP20.35■□□□□ 0.85
CNOT3-208ENST00000613073 C16orf71Q8IYS4 520 aaPredicted RBP20.35■□□□□ 0.85
CNOT3-208ENST00000613073 ARID3AQ99856 593 aa20.35■□□□□ 0.85
CNOT3-208ENST00000613073 C1orf141Q5JVX7 400 aa20.34■□□□□ 0.85
CNOT3-208ENST00000613073 PHAXQ9H814 394 aaKnown RBP20.34■□□□□ 0.85
CNOT3-208ENST00000613073 C22orf23Q9BZE7 217 aa20.34■□□□□ 0.85
CNOT3-208ENST00000613073 BABAM1Q9NWV8 329 aa20.34■□□□□ 0.85
CNOT3-208ENST00000613073 BTBD11A6QL63 1104 aa20.34■□□□□ 0.85
CNOT3-208ENST00000613073 BMP2KLQ5H9B9 411 aa20.33■□□□□ 0.85
CNOT3-208ENST00000613073 PHRF1Q9P1Y6 1649 aaKnown RBP20.33■□□□□ 0.84
CNOT3-208ENST00000613073 PXDNQ92626 1479 aa20.33■□□□□ 0.84
CNOT3-208ENST00000613073 SMARCA5O60264 1052 aaPredicted RBP20.33■□□□□ 0.84
CNOT3-208ENST00000613073 EIF4A1P60842 406 aaKnown RBP20.33■□□□□ 0.84
CNOT3-208ENST00000613073 AMOTQ4VCS5 1084 aa20.32■□□□□ 0.84
CNOT3-208ENST00000613073 KIF1AQ12756 1690 aa20.32■□□□□ 0.84
CNOT3-208ENST00000613073 PDCL3Q9H2J4 239 aa20.32■□□□□ 0.84
CNOT3-208ENST00000613073 RGPD5Q99666 1765 aa20.31■□□□□ 0.84
CNOT3-208ENST00000613073 CADPS2Q86UW7 1296 aa20.31■□□□□ 0.84
CNOT3-208ENST00000613073 OTUD7AQ8TE49 926 aaPredicted RBP20.31■□□□□ 0.84
CNOT3-208ENST00000613073 NLRP2Q9NX02 1062 aa20.31■□□□□ 0.84
CNOT3-208ENST00000613073 ERBB3P21860 1342 aa20.31■□□□□ 0.84
CNOT3-208ENST00000613073 RNMTO43148 476 aaKnown RBP20.3■□□□□ 0.84
CNOT3-208ENST00000613073 TPM2P07951 284 aa20.3■□□□□ 0.84
CNOT3-208ENST00000613073 FAM208AQ9UK61 1670 aaKnown RBP20.3■□□□□ 0.84
CNOT3-208ENST00000613073 ANXA1P04083 346 aa20.3■□□□□ 0.84
CNOT3-208ENST00000613073 CHRNA2Q15822 529 aa20.3■□□□□ 0.84
CNOT3-208ENST00000613073 MED1Q15648 1581 aaPredicted RBP20.3■□□□□ 0.84
CNOT3-208ENST00000613073 PLEKHM2Q8IWE5 1019 aa20.29■□□□□ 0.84
CNOT3-208ENST00000613073 CHPF2Q9P2E5 772 aa20.29■□□□□ 0.84
CNOT3-208ENST00000613073 GNAI2P04899 355 aa20.29■□□□□ 0.84
CNOT3-208ENST00000613073 A0A0U1RQG5 324 aaPredicted RBP20.28■□□□□ 0.84
CNOT3-208ENST00000613073 DDX11L8A8MPP1 907 aa20.27■□□□□ 0.84
CNOT3-208ENST00000613073 GSPT1P15170 499 aaKnown RBP20.27■□□□□ 0.84
CNOT3-208ENST00000613073 SOS1Q07889 1333 aaPredicted RBP20.27■□□□□ 0.84
CNOT3-208ENST00000613073 NPHP3Q7Z494 1330 aa20.27■□□□□ 0.84
CNOT3-208ENST00000613073 ALS2Q96Q42 1657 aa20.27■□□□□ 0.84
CNOT3-208ENST00000613073 CSB-PGBD3P0DP91 1061 aa20.27■□□□□ 0.83
CNOT3-208ENST00000613073 FOXD4L1Q9NU39 408 aa20.27■□□□□ 0.83
CNOT3-208ENST00000613073 HMMRO75330 724 aa20.26■□□□□ 0.83
CNOT3-208ENST00000613073 TBC1D9Q6ZT07 1266 aa20.26■□□□□ 0.83
CNOT3-208ENST00000613073 HSCBQ8IWL3 235 aa20.26■□□□□ 0.83
CNOT3-208ENST00000613073 EXOC6BQ9Y2D4 811 aa20.26■□□□□ 0.83
CNOT3-208ENST00000613073 RAPGEF4Q8WZA2 1011 aa20.25■□□□□ 0.83
CNOT3-208ENST00000613073 FAM13BQ9NYF5 915 aa20.25■□□□□ 0.83
CNOT3-208ENST00000613073 NCAPD2Q15021 1401 aa20.25■□□□□ 0.83
CNOT3-208ENST00000613073 LMO7Q8WWI1 1683 aa20.25■□□□□ 0.83
CNOT3-208ENST00000613073 PRAMEF22A3QJZ6 481 aa20.24■□□□□ 0.83
CNOT3-208ENST00000613073 LRRFIP2Q9Y608 721 aaKnown RBP20.24■□□□□ 0.83
CNOT3-208ENST00000613073 DCCP43146 1447 aa20.24■□□□□ 0.83
CNOT3-208ENST00000613073 PNMA6EA0A0J9YXQ4 647 aa20.24■□□□□ 0.83
CNOT3-208ENST00000613073 GNAI3P08754 354 aa20.24■□□□□ 0.83
CNOT3-208ENST00000613073 USP44Q9H0E7 712 aa20.23■□□□□ 0.83
CNOT3-208ENST00000613073 CACNA1FO60840 1977 aa20.23■□□□□ 0.83
CNOT3-208ENST00000613073 TNPO1Q92973 898 aaKnown RBP20.23■□□□□ 0.83
CNOT3-208ENST00000613073 PI4KAP2A4QPH2 592 aa20.22■□□□□ 0.83
CNOT3-208ENST00000613073 TTC22Q5TAA0 569 aa20.22■□□□□ 0.83
CNOT3-208ENST00000613073 PI4KAP1Q8N8J0 262 aa20.22■□□□□ 0.83
CNOT3-208ENST00000613073 KDM3BQ7LBC6 1761 aa20.21■□□□□ 0.83
CNOT3-208ENST00000613073 UBTFL1P0CB47 393 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms