RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 ARHGEF25Q86VW2 580 aa11.59□□□□□ -0.55
CCDC47-207ENST00000612558 EYA1Q99502 592 aa11.59□□□□□ -0.55
CCDC47-207ENST00000612558 IGSF1Q8N6C5 1336 aa11.59□□□□□ -0.55
CCDC47-207ENST00000612558 ALS2Q96Q42 1657 aa11.59□□□□□ -0.55
CCDC47-207ENST00000612558 LTN1O94822 1766 aa11.59□□□□□ -0.55
CCDC47-207ENST00000612558 LMOD3Q0VAK6 560 aa11.58□□□□□ -0.55
CCDC47-207ENST00000612558 KDRP35968 1356 aa11.58□□□□□ -0.56
CCDC47-207ENST00000612558 PXDNQ92626 1479 aa11.58□□□□□ -0.56
CCDC47-207ENST00000612558 PHRF1Q9P1Y6 1649 aaKnown RBP11.58□□□□□ -0.56
CCDC47-207ENST00000612558 CALD1Q05682 793 aaKnown RBP11.58□□□□□ -0.56
CCDC47-207ENST00000612558 SPATA31A3Q5VYP0 1347 aa11.58□□□□□ -0.56
CCDC47-207ENST00000612558 TNS3Q68CZ2 1445 aa11.57□□□□□ -0.56
CCDC47-207ENST00000612558 SOS2Q07890 1332 aaPredicted RBP11.56□□□□□ -0.56
CCDC47-207ENST00000612558 LTV1Q96GA3 475 aaPredicted RBP11.56□□□□□ -0.56
CCDC47-207ENST00000612558 PPP4R2Q9NY27 417 aa11.56□□□□□ -0.56
CCDC47-207ENST00000612558 ZBTB7CA1YPR0 619 aa11.55□□□□□ -0.56
CCDC47-207ENST00000612558 CT47B1P0C2W7 299 aaPredicted RBP11.55□□□□□ -0.56
CCDC47-207ENST00000612558 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.55□□□□□ -0.56
CCDC47-207ENST00000612558 MED1Q15648 1581 aaPredicted RBP11.55□□□□□ -0.56
CCDC47-207ENST00000612558 FANCIQ9NVI1 1328 aa11.54□□□□□ -0.56
CCDC47-207ENST00000612558 DLG5Q8TDM6 1919 aa11.54□□□□□ -0.56
CCDC47-207ENST00000612558 BCL11BQ9C0K0 894 aaPredicted RBP11.54□□□□□ -0.56
CCDC47-207ENST00000612558 ARSIQ5FYB1 569 aa11.54□□□□□ -0.56
CCDC47-207ENST00000612558 GAS2L2Q8NHY3 880 aa11.54□□□□□ -0.56
CCDC47-207ENST00000612558 PLIN1O60240 522 aa11.53□□□□□ -0.56
CCDC47-207ENST00000612558 ZC3H6P61129 1189 aaKnown RBP11.53□□□□□ -0.56
CCDC47-207ENST00000612558 GNAI1P63096 354 aa11.53□□□□□ -0.56
CCDC47-207ENST00000612558 TSR2Q969E8 191 aaKnown RBP11.53□□□□□ -0.56
CCDC47-207ENST00000612558 IFT57Q9NWB7 429 aa11.53□□□□□ -0.56
CCDC47-207ENST00000612558 STK24Q9Y6E0 443 aa11.53□□□□□ -0.56
CCDC47-207ENST00000612558 MTHFSDQ2M296 383 aaKnown RBP11.52□□□□□ -0.57
CCDC47-207ENST00000612558 NBPF6Q5VWK0 638 aa11.52□□□□□ -0.57
CCDC47-207ENST00000612558 ANKRD24Q8TF21 1146 aa11.52□□□□□ -0.57
CCDC47-207ENST00000612558 NBPF4Q96M43 638 aa11.52□□□□□ -0.57
CCDC47-207ENST00000612558 LTBP4Q8N2S1 1624 aa11.52□□□□□ -0.57
CCDC47-207ENST00000612558 FAM83GA6ND36 823 aa11.51□□□□□ -0.57
CCDC47-207ENST00000612558 BCAR3O75815 825 aa11.51□□□□□ -0.57
CCDC47-207ENST00000612558 ZNF853P0CG23 659 aa11.51□□□□□ -0.57
CCDC47-207ENST00000612558 RARSP54136 660 aaKnown RBP11.51□□□□□ -0.57
CCDC47-207ENST00000612558 EXOSC9Q06265 439 aaKnown RBP11.51□□□□□ -0.57
CCDC47-207ENST00000612558 CABLES1Q8TDN4 633 aa11.51□□□□□ -0.57
CCDC47-207ENST00000612558 CFAP44Q96MT7 982 aa11.51□□□□□ -0.57
CCDC47-207ENST00000612558 THUMPD2Q9BTF0 503 aaKnown RBP11.51□□□□□ -0.57
CCDC47-207ENST00000612558 AXIN2Q9Y2T1 843 aa11.51□□□□□ -0.57
CCDC47-207ENST00000612558 HTATSF1O43719 755 aaKnown RBP11.5□□□□□ -0.57
CCDC47-207ENST00000612558 RTF1Q92541 710 aaKnown RBP11.5□□□□□ -0.57
CCDC47-207ENST00000612558 LAS1LQ9Y4W2 734 aaKnown RBP11.5□□□□□ -0.57
CCDC47-207ENST00000612558 CPDO75976 1380 aa11.5□□□□□ -0.57
CCDC47-207ENST00000612558 DCTN1Q14203 1278 aa11.5□□□□□ -0.57
CCDC47-207ENST00000612558 USHBP1Q8N6Y0 703 aa11.5□□□□□ -0.57
CCDC47-207ENST00000612558 LRRC59Q96AG4 307 aaKnown RBP11.5□□□□□ -0.57
CCDC47-207ENST00000612558 NHSL1Q5SYE7 1610 aa11.49□□□□□ -0.57
CCDC47-207ENST00000612558 CRYBG1Q9Y4K1 1723 aa11.49□□□□□ -0.57
CCDC47-207ENST00000612558 MCM10Q7L590 875 aa11.49□□□□□ -0.57
CCDC47-207ENST00000612558 FBXO22Q8NEZ5 403 aa11.49□□□□□ -0.57
CCDC47-207ENST00000612558 MBIPQ9NS73 344 aa11.49□□□□□ -0.57
CCDC47-207ENST00000612558 ABCC6O95255 1503 aa11.49□□□□□ -0.57
CCDC47-207ENST00000612558 NCAPD2Q15021 1401 aa11.48□□□□□ -0.57
CCDC47-207ENST00000612558 GNAT3A8MTJ3 354 aa11.48□□□□□ -0.57
CCDC47-207ENST00000612558 EXOC6Q8TAG9 804 aa11.48□□□□□ -0.57
CCDC47-207ENST00000612558 ZNF428Q96B54 188 aa11.48□□□□□ -0.57
CCDC47-207ENST00000612558 COL18A1P39060 1754 aa11.48□□□□□ -0.57
CCDC47-207ENST00000612558 RGPD2P0DJD1 1756 aa11.47□□□□□ -0.57
CCDC47-207ENST00000612558 RGPD5Q99666 1765 aa11.47□□□□□ -0.57
CCDC47-207ENST00000612558 CHL1O00533 1208 aa11.47□□□□□ -0.57
CCDC47-207ENST00000612558 PDE3AQ14432 1141 aa11.47□□□□□ -0.57
CCDC47-207ENST00000612558 ANKRD13DQ6ZTN6 518 aa11.47□□□□□ -0.57
CCDC47-207ENST00000612558 KIAA0232Q92628 1395 aa11.47□□□□□ -0.57
CCDC47-207ENST00000612558 STK25O00506 426 aa11.46□□□□□ -0.57
CCDC47-207ENST00000612558 CANXP27824 592 aaKnown RBP11.46□□□□□ -0.57
CCDC47-207ENST00000612558 AMOTQ4VCS5 1084 aa11.46□□□□□ -0.57
CCDC47-207ENST00000612558 PLEKHO1Q53GL0 409 aaPredicted RBP11.46□□□□□ -0.57
CCDC47-207ENST00000612558 C20orf194Q5TEA3 1177 aa11.46□□□□□ -0.57
CCDC47-207ENST00000612558 B4GALNT3Q6L9W6 998 aa11.46□□□□□ -0.57
CCDC47-207ENST00000612558 CRBNQ96SW2 442 aa11.46□□□□□ -0.57
CCDC47-207ENST00000612558 CRB1P82279 1406 aa11.46□□□□□ -0.58
CCDC47-207ENST00000612558 CAMTA1Q9Y6Y1 1673 aa11.46□□□□□ -0.58
CCDC47-207ENST00000612558 MAP3K5Q99683 1374 aa11.45□□□□□ -0.58
CCDC47-207ENST00000612558 HAP1P54257 671 aaPredicted RBP11.45□□□□□ -0.58
CCDC47-207ENST00000612558 CHRNA2Q15822 529 aa11.45□□□□□ -0.58
CCDC47-207ENST00000612558 ALDH1L2Q3SY69 923 aa11.45□□□□□ -0.58
CCDC47-207ENST00000612558 CCDC136Q96JN2 1154 aa11.45□□□□□ -0.58
CCDC47-207ENST00000612558 VAMP4O75379 141 aa11.45□□□□□ -0.58
CCDC47-207ENST00000612558 SSH1Q8WYL5 1049 aa11.45□□□□□ -0.58
CCDC47-207ENST00000612558 FRAT1Q92837 279 aaPredicted RBP11.45□□□□□ -0.58
CCDC47-207ENST00000612558 BCL2L13Q9BXK5 485 aa11.45□□□□□ -0.58
CCDC47-207ENST00000612558 PRDM11Q9NQV5 511 aa11.45□□□□□ -0.58
CCDC47-207ENST00000612558 SMC4Q9NTJ3 1288 aa11.45□□□□□ -0.58
CCDC47-207ENST00000612558 NLRP2Q9NX02 1062 aa11.45□□□□□ -0.58
CCDC47-207ENST00000612558 ROBO1Q9Y6N7 1651 aa11.44□□□□□ -0.58
CCDC47-207ENST00000612558 CSB-PGBD3P0DP91 1061 aa11.44□□□□□ -0.58
CCDC47-207ENST00000612558 IL17REQ8NFR9 667 aa11.44□□□□□ -0.58
CCDC47-207ENST00000612558 LMO7Q8WWI1 1683 aa11.43□□□□□ -0.58
CCDC47-207ENST00000612558 TOM1O60784 492 aa11.43□□□□□ -0.58
CCDC47-207ENST00000612558 MS4A1P11836 297 aa11.43□□□□□ -0.58
CCDC47-207ENST00000612558 BRPF1P55201 1214 aaPredicted RBP11.43□□□□□ -0.58
CCDC47-207ENST00000612558 TWISTNBQ3B726 338 aaPredicted RBP11.43□□□□□ -0.58
CCDC47-207ENST00000612558 AKAP4Q5JQC9 854 aa11.43□□□□□ -0.58
CCDC47-207ENST00000612558 ZKSCAN2Q63HK3 967 aa11.43□□□□□ -0.58
CCDC47-207ENST00000612558 RAPGEF4Q8WZA2 1011 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms