RNA–Protein interactions for RNA: ENST00000611112.4

LINC01517-202, Transcript of long intergenic non-protein coding RNA 1517, humanhuman

TSL 5 BASIC

Gene LINC01517, Length 539 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01517-202ENST00000611112 SMARCC1Q92922 1105 aaPredicted RBP15.12■□□□□ 0.01
LINC01517-202ENST00000611112 ATG3Q9NT62 314 aa15.12■□□□□ 0.01
LINC01517-202ENST00000611112 TEFQ10587 303 aa15.11■□□□□ 0.01
LINC01517-202ENST00000611112 APAF1O14727 1248 aa15.1■□□□□ 0.01
LINC01517-202ENST00000611112 HTATSF1O43719 755 aaKnown RBP15.1■□□□□ 0.01
LINC01517-202ENST00000611112 SLC39A6Q13433 755 aa15.1■□□□□ 0.01
LINC01517-202ENST00000611112 THUMPD2Q9BTF0 503 aaKnown RBP15.1■□□□□ 0.01
LINC01517-202ENST00000611112 PALLDQ8WX93 1383 aa15.1■□□□□ 0.01
LINC01517-202ENST00000611112 SCN11AQ9UI33 1791 aa15.09■□□□□ 0.01
LINC01517-202ENST00000611112 RBM42Q9BTD8 480 aaKnown RBP15.09■□□□□ 0.01
LINC01517-202ENST00000611112 LRRC4BQ9NT99 713 aa15.09■□□□□ 0.01
LINC01517-202ENST00000611112 CCNL1Q9UK58 526 aaPredicted RBP15.09■□□□□ 0.01
LINC01517-202ENST00000611112 CCER2I3L3R5 266 aa15.08■□□□□ 0
LINC01517-202ENST00000611112 PTCD1O75127 700 aaKnown RBP15.08■□□□□ 0
LINC01517-202ENST00000611112 LOC102724428A0A0B4J2F2 783 aa15.07■□□□□ 0
LINC01517-202ENST00000611112 SIK1P57059 783 aa15.07■□□□□ 0
LINC01517-202ENST00000611112 SLC27A3Q5K4L6 730 aa15.07■□□□□ 0
LINC01517-202ENST00000611112 NBPF14Q5TI25 921 aa15.07■□□□□ 0
LINC01517-202ENST00000611112 BTBD11A6QL63 1104 aa15.06■□□□□ 0
LINC01517-202ENST00000611112 ATP6V1AP38606 617 aa15.06■□□□□ 0
LINC01517-202ENST00000611112 MIS18AQ9NYP9 233 aa15.06■□□□□ 0
LINC01517-202ENST00000611112 CEMIPQ8WUJ3 1361 aa15.06■□□□□ 0
LINC01517-202ENST00000611112 PSDA5PKW4 1024 aaPredicted RBP15.05■□□□□ -0
LINC01517-202ENST00000611112 LMOD3Q0VAK6 560 aa15.05■□□□□ -0
LINC01517-202ENST00000611112 TAF7Q15545 349 aaPredicted RBP15.05■□□□□ -0
LINC01517-202ENST00000611112 TRIM35Q9UPQ4 493 aa15.05■□□□□ -0
LINC01517-202ENST00000611112 VIRMAQ69YN4 1812 aaKnown RBP15.05■□□□□ -0
LINC01517-202ENST00000611112 DLG5Q8TDM6 1919 aa15.05■□□□□ -0
LINC01517-202ENST00000611112 ADAMTS7Q9UKP4 1686 aa15.04■□□□□ -0
LINC01517-202ENST00000611112 MRC1P22897 1456 aa15.04■□□□□ -0
LINC01517-202ENST00000611112 KCNQ3O43525 872 aa15.04■□□□□ -0
LINC01517-202ENST00000611112 R3HDM1Q15032 1099 aaKnown RBP15.04■□□□□ -0
LINC01517-202ENST00000611112 TTC5Q8N0Z6 440 aa15.04■□□□□ -0
LINC01517-202ENST00000611112 SLC4A9Q96Q91 983 aa15.04■□□□□ -0
LINC01517-202ENST00000611112 ANO8Q9HCE9 1232 aaPredicted RBP15.04■□□□□ -0
LINC01517-202ENST00000611112 STK32BQ9NY57 414 aa15.04■□□□□ -0
LINC01517-202ENST00000611112 SALL2Q9Y467 1007 aaPredicted RBP15.04■□□□□ -0
LINC01517-202ENST00000611112 RGPD3A6NKT7 1758 aaPredicted RBP15.03■□□□□ -0
LINC01517-202ENST00000611112 RGPD4Q7Z3J3 1758 aa15.03■□□□□ -0
LINC01517-202ENST00000611112 ITPK1Q13572 414 aa15.03■□□□□ -0
LINC01517-202ENST00000611112 RREB1Q92766 1687 aa15.03■□□□□ -0
LINC01517-202ENST00000611112 SLC15A2Q16348 729 aa15.02■□□□□ -0
LINC01517-202ENST00000611112 ZNF790Q6PG37 636 aa15.02■□□□□ -0
LINC01517-202ENST00000611112 LAS1LQ9Y4W2 734 aaKnown RBP15.02■□□□□ -0
LINC01517-202ENST00000611112 LY75O60449 1722 aa15.02□□□□□ -0.01
LINC01517-202ENST00000611112 NUP188Q5SRE5 1749 aa15.02□□□□□ -0.01
LINC01517-202ENST00000611112 ZNF827Q17R98 1081 aa15.01□□□□□ -0.01
LINC01517-202ENST00000611112 LINC00116Q8NCU8 138 aa15.01□□□□□ -0.01
LINC01517-202ENST00000611112 ZNF496Q96IT1 587 aaPredicted RBP15.01□□□□□ -0.01
LINC01517-202ENST00000611112 DNAJC10Q8IXB1 793 aa15□□□□□ -0.01
LINC01517-202ENST00000611112 AKT1S1Q96B36 256 aa15□□□□□ -0.01
LINC01517-202ENST00000611112 FMNL2Q96PY5 1086 aa14.99□□□□□ -0.01
LINC01517-202ENST00000611112 TFCP2L1Q9NZI6 479 aa14.99□□□□□ -0.01
LINC01517-202ENST00000611112 TSPYL4Q9UJ04 414 aa14.99□□□□□ -0.01
LINC01517-202ENST00000611112 HMGB2P26583 209 aaKnown RBP14.98□□□□□ -0.01
LINC01517-202ENST00000611112 SMIM5Q71RC9 77 aa14.98□□□□□ -0.01
LINC01517-202ENST00000611112 AK7Q96M32 723 aa14.98□□□□□ -0.01
LINC01517-202ENST00000611112 SIPA1L3O60292 1781 aaPredicted RBP14.98□□□□□ -0.01
LINC01517-202ENST00000611112 KCPQ6ZWJ8 1503 aa14.97□□□□□ -0.01
LINC01517-202ENST00000611112 MSH5O43196 834 aa14.96□□□□□ -0.01
LINC01517-202ENST00000611112 WWC1Q8IX03 1113 aa14.96□□□□□ -0.01
LINC01517-202ENST00000611112 VSIG10Q8N0Z9 540 aa14.96□□□□□ -0.01
LINC01517-202ENST00000611112 PDGFDQ9GZP0 370 aaPredicted RBP14.96□□□□□ -0.01
LINC01517-202ENST00000611112 HEG1Q9ULI3 1381 aa14.96□□□□□ -0.02
LINC01517-202ENST00000611112 PAPPAQ13219 1627 aa14.95□□□□□ -0.02
LINC01517-202ENST00000611112 PRAMEF22A3QJZ6 481 aa14.95□□□□□ -0.02
LINC01517-202ENST00000611112 CHL1O00533 1208 aa14.95□□□□□ -0.02
LINC01517-202ENST00000611112 GNPATO15228 680 aa14.95□□□□□ -0.02
LINC01517-202ENST00000611112 PHF14O94880 888 aa14.95□□□□□ -0.02
LINC01517-202ENST00000611112 CRKLP46109 303 aaKnown RBP14.95□□□□□ -0.02
LINC01517-202ENST00000611112 CALD1Q05682 793 aaKnown RBP14.95□□□□□ -0.02
LINC01517-202ENST00000611112 C5P01031 1676 aa14.94□□□□□ -0.02
LINC01517-202ENST00000611112 SNRPA1P09661 255 aaKnown RBP14.94□□□□□ -0.02
LINC01517-202ENST00000611112 CYP19A1P11511 503 aaPredicted RBP14.94□□□□□ -0.02
LINC01517-202ENST00000611112 EIF4A1P60842 406 aaKnown RBP14.94□□□□□ -0.02
LINC01517-202ENST00000611112 CCDC27Q2M243 656 aa14.94□□□□□ -0.02
LINC01517-202ENST00000611112 RC3H1Q5TC82 1133 aaKnown RBP14.94□□□□□ -0.02
LINC01517-202ENST00000611112 AMIGO3Q86WK7 504 aa14.94□□□□□ -0.02
LINC01517-202ENST00000611112 TEX13AQ9BXU3 409 aaPredicted RBP14.94□□□□□ -0.02
LINC01517-202ENST00000611112 BABAM1Q9NWV8 329 aa14.94□□□□□ -0.02
LINC01517-202ENST00000611112 PNPLA7Q6ZV29 1317 aa14.93□□□□□ -0.02
LINC01517-202ENST00000611112 C4BP0C0L5 1744 aa14.93□□□□□ -0.02
LINC01517-202ENST00000611112 STARD3NLO95772 234 aa14.93□□□□□ -0.02
LINC01517-202ENST00000611112 INTS5Q6P9B9 1019 aaKnown RBP14.93□□□□□ -0.02
LINC01517-202ENST00000611112 COL23A1Q86Y22 540 aaPredicted RBP14.93□□□□□ -0.02
LINC01517-202ENST00000611112 CFAP44Q96MT7 982 aa14.93□□□□□ -0.02
LINC01517-202ENST00000611112 CCDC87Q9NVE4 849 aa14.93□□□□□ -0.02
LINC01517-202ENST00000611112 USP16Q9Y5T5 823 aa14.93□□□□□ -0.02
LINC01517-202ENST00000611112 TAF1LQ8IZX4 1826 aa14.93□□□□□ -0.02
LINC01517-202ENST00000611112 CNTNAP4Q9C0A0 1308 aa14.92□□□□□ -0.02
LINC01517-202ENST00000611112 CANXP27824 592 aaKnown RBP14.92□□□□□ -0.02
LINC01517-202ENST00000611112 GNAI1P63096 354 aa14.92□□□□□ -0.02
LINC01517-202ENST00000611112 NCBP3Q53F19 620 aaKnown RBP14.92□□□□□ -0.02
LINC01517-202ENST00000611112 MBIPQ9NS73 344 aa14.92□□□□□ -0.02
LINC01517-202ENST00000611112 IFT57Q9NWB7 429 aa14.92□□□□□ -0.02
LINC01517-202ENST00000611112 RTCBQ9Y3I0 505 aaKnown RBP14.92□□□□□ -0.02
LINC01517-202ENST00000611112 UBR2Q8IWV8 1755 aa14.91□□□□□ -0.02
LINC01517-202ENST00000611112 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.91□□□□□ -0.02
LINC01517-202ENST00000611112 GIGYF1O75420 1035 aaPredicted RBP14.91□□□□□ -0.02
LINC01517-202ENST00000611112 RPS6KA4O75676 772 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms