RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 BRPF1P55201 1214 aaPredicted RBP16.84■□□□□ 0.29
PCDHB16-201ENST00000609684 METTL24Q5JXM2 366 aa16.84■□□□□ 0.29
PCDHB16-201ENST00000609684 TTLL5Q6EMB2 1281 aa16.84■□□□□ 0.29
PCDHB16-201ENST00000609684 TBC1D9Q6ZT07 1266 aa16.84■□□□□ 0.29
PCDHB16-201ENST00000609684 FILIP1LQ4L180 1135 aa16.84■□□□□ 0.29
PCDHB16-201ENST00000609684 A2MP01023 1474 aa16.84■□□□□ 0.29
PCDHB16-201ENST00000609684 OFD1O75665 1012 aa16.84■□□□□ 0.29
PCDHB16-201ENST00000609684 CDKL5O76039 1030 aa16.84■□□□□ 0.29
PCDHB16-201ENST00000609684 TMOD3Q9NYL9 352 aa16.83■□□□□ 0.29
PCDHB16-201ENST00000609684 RAI14Q9P0K7 980 aa16.83■□□□□ 0.29
PCDHB16-201ENST00000609684 SYCE3A1L190 88 aa16.83■□□□□ 0.28
PCDHB16-201ENST00000609684 SERPINC1P01008 464 aa16.83■□□□□ 0.28
PCDHB16-201ENST00000609684 EPS15P42566 896 aa16.83■□□□□ 0.28
PCDHB16-201ENST00000609684 IMMTQ16891 758 aaKnown RBP16.83■□□□□ 0.28
PCDHB16-201ENST00000609684 ASXL2Q76L83 1435 aa16.83■□□□□ 0.28
PCDHB16-201ENST00000609684 CDK5RAP3Q96JB5 506 aa16.83■□□□□ 0.28
PCDHB16-201ENST00000609684 HYPKQ9NX55 129 aa16.83■□□□□ 0.28
PCDHB16-201ENST00000609684 LRP2BPQ9P2M1 347 aa16.83■□□□□ 0.28
PCDHB16-201ENST00000609684 KIAA0556O60303 1618 aa16.83■□□□□ 0.28
PCDHB16-201ENST00000609684 HSP90AB2PQ58FF8 381 aa16.82■□□□□ 0.28
PCDHB16-201ENST00000609684 TEX35Q5T0J7 233 aa16.82■□□□□ 0.28
PCDHB16-201ENST00000609684 UBAC1Q9BSL1 405 aa16.82■□□□□ 0.28
PCDHB16-201ENST00000609684 PCDHB15Q9Y5E8 787 aa16.82■□□□□ 0.28
PCDHB16-201ENST00000609684 WDR62O43379 1518 aa16.82■□□□□ 0.28
PCDHB16-201ENST00000609684 CFAP43Q8NDM7 1665 aa16.82■□□□□ 0.28
PCDHB16-201ENST00000609684 IGHMBP2P38935 993 aaKnown RBP16.82■□□□□ 0.28
PCDHB16-201ENST00000609684 AIDAQ96BJ3 306 aa16.82■□□□□ 0.28
PCDHB16-201ENST00000609684 SSFA2P28290 1259 aa16.81■□□□□ 0.28
PCDHB16-201ENST00000609684 BICDL1Q6ZP65 573 aa16.81■□□□□ 0.28
PCDHB16-201ENST00000609684 IFIT1P09914 478 aaKnown RBP16.81■□□□□ 0.28
PCDHB16-201ENST00000609684 PDIA4P13667 645 aaKnown RBP16.81■□□□□ 0.28
PCDHB16-201ENST00000609684 HMGN5P82970 282 aaKnown RBP16.81■□□□□ 0.28
PCDHB16-201ENST00000609684 ATP2B2Q01814 1243 aa16.81■□□□□ 0.28
PCDHB16-201ENST00000609684 AKAP2Q9Y2D5 859 aa16.81■□□□□ 0.28
PCDHB16-201ENST00000609684 U3KPZ7 1027 aaPredicted RBP16.81■□□□□ 0.28
PCDHB16-201ENST00000609684 ABCF2Q9UG63 623 aa16.8■□□□□ 0.28
PCDHB16-201ENST00000609684 HDAC1Q13547 482 aaPredicted RBP16.8■□□□□ 0.28
PCDHB16-201ENST00000609684 TBC1D32Q96NH3 1257 aa16.8■□□□□ 0.28
PCDHB16-201ENST00000609684 TNRQ92752 1358 aa16.8■□□□□ 0.28
PCDHB16-201ENST00000609684 PI4KAP2A4QPH2 592 aa16.8■□□□□ 0.28
PCDHB16-201ENST00000609684 ESPNB1AK53 854 aa16.8■□□□□ 0.28
PCDHB16-201ENST00000609684 PI4KAP1Q8N8J0 262 aa16.8■□□□□ 0.28
PCDHB16-201ENST00000609684 TNPO1Q92973 898 aaKnown RBP16.8■□□□□ 0.28
PCDHB16-201ENST00000609684 MAP3K2Q9Y2U5 619 aa16.8■□□□□ 0.28
PCDHB16-201ENST00000609684 ADAMTS12P58397 1594 aa16.8■□□□□ 0.28
PCDHB16-201ENST00000609684 A0A087WZG4 1122 aa16.79■□□□□ 0.28
PCDHB16-201ENST00000609684 TSHZ3Q63HK5 1081 aa16.79■□□□□ 0.28
PCDHB16-201ENST00000609684 ARHGAP45Q92619 1136 aa16.79■□□□□ 0.28
PCDHB16-201ENST00000609684 MAGEC2Q9UBF1 373 aaPredicted RBP16.79■□□□□ 0.28
PCDHB16-201ENST00000609684 SMARCE1Q969G3 411 aa16.79■□□□□ 0.28
PCDHB16-201ENST00000609684 CEP57L1Q8IYX8 460 aa16.79■□□□□ 0.28
PCDHB16-201ENST00000609684 POLR3AO14802 1390 aaPredicted RBP16.79■□□□□ 0.28
PCDHB16-201ENST00000609684 PIP4K2AP48426 406 aaPredicted RBP16.79■□□□□ 0.28
PCDHB16-201ENST00000609684 KRT28Q7Z3Y7 464 aa16.78■□□□□ 0.28
PCDHB16-201ENST00000609684 PPP1R42Q7Z4L9 355 aa16.78■□□□□ 0.28
PCDHB16-201ENST00000609684 PIK3R4Q99570 1358 aa16.78■□□□□ 0.28
PCDHB16-201ENST00000609684 ANXA1P04083 346 aa16.78■□□□□ 0.28
PCDHB16-201ENST00000609684 TTC22Q5TAA0 569 aa16.78■□□□□ 0.28
PCDHB16-201ENST00000609684 ECHDC1Q9NTX5 307 aa16.78■□□□□ 0.28
PCDHB16-201ENST00000609684 SH2B1Q9NRF2 756 aaPredicted RBP16.78■□□□□ 0.28
PCDHB16-201ENST00000609684 NOL7Q9UMY1 257 aaKnown RBP16.78■□□□□ 0.28
PCDHB16-201ENST00000609684 CCP110O43303 1012 aa16.78■□□□□ 0.28
PCDHB16-201ENST00000609684 MAP3K11Q16584 847 aa16.78■□□□□ 0.28
PCDHB16-201ENST00000609684 ZNF518AQ6AHZ1 1483 aa16.78■□□□□ 0.28
PCDHB16-201ENST00000609684 NUCB1Q02818 461 aa16.77■□□□□ 0.28
PCDHB16-201ENST00000609684 CAGE1Q8TC20 777 aa16.77■□□□□ 0.28
PCDHB16-201ENST00000609684 MEIS3Q99687 375 aa16.77■□□□□ 0.28
PCDHB16-201ENST00000609684 RUFY1Q96T51 708 aa16.77■□□□□ 0.28
PCDHB16-201ENST00000609684 IFIT5Q13325 482 aaKnown RBP16.77■□□□□ 0.28
PCDHB16-201ENST00000609684 MTERF4Q7Z6M4 381 aaKnown RBP16.77■□□□□ 0.28
PCDHB16-201ENST00000609684 DACH1Q9UI36 760 aa16.77■□□□□ 0.28
PCDHB16-201ENST00000609684 LIMCH1Q9UPQ0 1083 aa16.77■□□□□ 0.28
PCDHB16-201ENST00000609684 HSP90B2PQ58FF3 399 aa16.77■□□□□ 0.27
PCDHB16-201ENST00000609684 PPIP5K1Q6PFW1 1433 aa16.77■□□□□ 0.27
PCDHB16-201ENST00000609684 CAMK4Q16566 473 aa16.76■□□□□ 0.27
PCDHB16-201ENST00000609684 CCAR1Q8IX12 1150 aaKnown RBP16.76■□□□□ 0.27
PCDHB16-201ENST00000609684 MAP7D2Q96T17 732 aa16.76■□□□□ 0.27
PCDHB16-201ENST00000609684 KRT18P05783 430 aaKnown RBP16.76■□□□□ 0.27
PCDHB16-201ENST00000609684 CT47A1Q5JQC4 288 aaPredicted RBP16.76■□□□□ 0.27
PCDHB16-201ENST00000609684 LARP6Q9BRS8 491 aaKnown RBP16.76■□□□□ 0.27
PCDHB16-201ENST00000609684 CARD14Q9BXL6 1004 aa16.76■□□□□ 0.27
PCDHB16-201ENST00000609684 ACBD3Q9H3P7 528 aa16.76■□□□□ 0.27
PCDHB16-201ENST00000609684 ZBTB3Q9H5J0 574 aa16.76■□□□□ 0.27
PCDHB16-201ENST00000609684 PIP4K2BP78356 416 aa16.76■□□□□ 0.27
PCDHB16-201ENST00000609684 C8orf58Q8NAV2 365 aa16.76■□□□□ 0.27
PCDHB16-201ENST00000609684 POLKQ9UBT6 870 aa16.76■□□□□ 0.27
PCDHB16-201ENST00000609684 WDR7Q9Y4E6 1490 aa16.76■□□□□ 0.27
PCDHB16-201ENST00000609684 AEBP2Q6ZN18 517 aaPredicted RBP16.76■□□□□ 0.27
PCDHB16-201ENST00000609684 ZRANB1Q9UGI0 708 aa16.76■□□□□ 0.27
PCDHB16-201ENST00000609684 PLEKHH1Q9ULM0 1364 aa16.75■□□□□ 0.27
PCDHB16-201ENST00000609684 SOGA3Q5TF21 947 aa16.75■□□□□ 0.27
PCDHB16-201ENST00000609684 FILIP1Q7Z7B0 1213 aa16.75■□□□□ 0.27
PCDHB16-201ENST00000609684 ANKRD24Q8TF21 1146 aa16.75■□□□□ 0.27
PCDHB16-201ENST00000609684 TNNQ9UQP3 1299 aa16.75■□□□□ 0.27
PCDHB16-201ENST00000609684 IFNL2Q8IZJ0 200 aa16.75■□□□□ 0.27
PCDHB16-201ENST00000609684 EVI5LQ96CN4 794 aa16.75■□□□□ 0.27
PCDHB16-201ENST00000609684 WASF1Q92558 559 aa16.74■□□□□ 0.27
PCDHB16-201ENST00000609684 UHRF1BP1LA0JNW5 1464 aa16.74■□□□□ 0.27
PCDHB16-201ENST00000609684 SHANK2Q9UPX8 1470 aa16.74■□□□□ 0.27
PCDHB16-201ENST00000609684 ATP5J2-PTCD1G3V325 749 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms