RNA–Protein interactions for RNA: ENST00000609606.5

CSNK2A1-209, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2

Gene CSNK2A1, Length 589 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-209ENST00000609606 NUP188Q5SRE5 1749 aa19.83■□□□□ 0.77
CSNK2A1-209ENST00000609606 SMARCC1Q92922 1105 aaPredicted RBP19.83■□□□□ 0.77
CSNK2A1-209ENST00000609606 SIPA1L3O60292 1781 aaPredicted RBP19.83■□□□□ 0.76
CSNK2A1-209ENST00000609606 IL17REQ8NFR9 667 aa19.82■□□□□ 0.76
CSNK2A1-209ENST00000609606 SLC52A2Q9HAB3 445 aa19.82■□□□□ 0.76
CSNK2A1-209ENST00000609606 CCER2I3L3R5 266 aa19.81■□□□□ 0.76
CSNK2A1-209ENST00000609606 TXNRD1Q16881 649 aa19.81■□□□□ 0.76
CSNK2A1-209ENST00000609606 CCDC146Q8IYE0 955 aa19.81■□□□□ 0.76
CSNK2A1-209ENST00000609606 PROM2Q8N271 834 aa19.81■□□□□ 0.76
CSNK2A1-209ENST00000609606 NFATC2IPQ8NCF5 419 aa19.81■□□□□ 0.76
CSNK2A1-209ENST00000609606 RTF1Q92541 710 aaKnown RBP19.81■□□□□ 0.76
CSNK2A1-209ENST00000609606 SLC27A3Q5K4L6 730 aa19.8■□□□□ 0.76
CSNK2A1-209ENST00000609606 PALLDQ8WX93 1383 aa19.8■□□□□ 0.76
CSNK2A1-209ENST00000609606 TMPOP42166 694 aaKnown RBP19.79■□□□□ 0.76
CSNK2A1-209ENST00000609606 PAPPAQ13219 1627 aa19.79■□□□□ 0.76
CSNK2A1-209ENST00000609606 ATG3Q9NT62 314 aa19.78■□□□□ 0.76
CSNK2A1-209ENST00000609606 ASAP1Q9ULH1 1129 aa19.78■□□□□ 0.76
CSNK2A1-209ENST00000609606 ZNF831Q5JPB2 1677 aa19.78■□□□□ 0.76
CSNK2A1-209ENST00000609606 TEFQ10587 303 aa19.77■□□□□ 0.76
CSNK2A1-209ENST00000609606 HMGB2P26583 209 aaKnown RBP19.76■□□□□ 0.75
CSNK2A1-209ENST00000609606 RIPK4P57078 832 aa19.76■□□□□ 0.75
CSNK2A1-209ENST00000609606 LMOD3Q0VAK6 560 aa19.76■□□□□ 0.75
CSNK2A1-209ENST00000609606 TAF1LQ8IZX4 1826 aa19.76■□□□□ 0.75
CSNK2A1-209ENST00000609606 MCM10Q7L590 875 aa19.75■□□□□ 0.75
CSNK2A1-209ENST00000609606 UBR2Q8IWV8 1755 aa19.75■□□□□ 0.75
CSNK2A1-209ENST00000609606 LRRC4BQ9NT99 713 aa19.74■□□□□ 0.75
CSNK2A1-209ENST00000609606 CCNL1Q9UK58 526 aaPredicted RBP19.74■□□□□ 0.75
CSNK2A1-209ENST00000609606 C5P01031 1676 aa19.73■□□□□ 0.75
CSNK2A1-209ENST00000609606 LOC102724428A0A0B4J2F2 783 aa19.73■□□□□ 0.75
CSNK2A1-209ENST00000609606 APAF1O14727 1248 aa19.73■□□□□ 0.75
CSNK2A1-209ENST00000609606 SIK1P57059 783 aa19.73■□□□□ 0.75
CSNK2A1-209ENST00000609606 DCTN1Q14203 1278 aa19.73■□□□□ 0.75
CSNK2A1-209ENST00000609606 CICQ96RK0 1608 aaPredicted RBP19.73■□□□□ 0.75
CSNK2A1-209ENST00000609606 MAPK8IP2Q13387 824 aaPredicted RBP19.72■□□□□ 0.75
CSNK2A1-209ENST00000609606 NBPF14Q5TI25 921 aa19.72■□□□□ 0.75
CSNK2A1-209ENST00000609606 MIER1Q8N108 512 aa19.72■□□□□ 0.75
CSNK2A1-209ENST00000609606 RRP7AQ9Y3A4 280 aaKnown RBP19.72■□□□□ 0.75
CSNK2A1-209ENST00000609606 TAF7Q15545 349 aaPredicted RBP19.7■□□□□ 0.74
CSNK2A1-209ENST00000609606 NEUROD2Q15784 382 aa19.7■□□□□ 0.74
CSNK2A1-209ENST00000609606 FAM9BQ8IZU0 186 aa19.7■□□□□ 0.74
CSNK2A1-209ENST00000609606 TRIM35Q9UPQ4 493 aa19.7■□□□□ 0.74
CSNK2A1-209ENST00000609606 KCPQ6ZWJ8 1503 aa19.7■□□□□ 0.74
CSNK2A1-209ENST00000609606 BTBD11A6QL63 1104 aa19.69■□□□□ 0.74
CSNK2A1-209ENST00000609606 SLC39A6Q13433 755 aa19.69■□□□□ 0.74
CSNK2A1-209ENST00000609606 ZNF790Q6PG37 636 aa19.69■□□□□ 0.74
CSNK2A1-209ENST00000609606 COL5A3P25940 1745 aaPredicted RBP19.68■□□□□ 0.74
CSNK2A1-209ENST00000609606 KDM3BQ7LBC6 1761 aa19.68■□□□□ 0.74
CSNK2A1-209ENST00000609606 KCNQ4P56696 695 aa19.68■□□□□ 0.74
CSNK2A1-209ENST00000609606 CNKSR2Q8WXI2 1034 aa19.68■□□□□ 0.74
CSNK2A1-209ENST00000609606 RBM42Q9BTD8 480 aaKnown RBP19.68■□□□□ 0.74
CSNK2A1-209ENST00000609606 THUMPD2Q9BTF0 503 aaKnown RBP19.68■□□□□ 0.74
CSNK2A1-209ENST00000609606 QSER1Q2KHR3 1735 aa19.68■□□□□ 0.74
CSNK2A1-209ENST00000609606 PTCD1O75127 700 aaKnown RBP19.67■□□□□ 0.74
CSNK2A1-209ENST00000609606 ATP6V1AP38606 617 aa19.67■□□□□ 0.74
CSNK2A1-209ENST00000609606 TTC5Q8N0Z6 440 aa19.67■□□□□ 0.74
CSNK2A1-209ENST00000609606 SLC4A9Q96Q91 983 aa19.67■□□□□ 0.74
CSNK2A1-209ENST00000609606 ANO8Q9HCE9 1232 aaPredicted RBP19.67■□□□□ 0.74
CSNK2A1-209ENST00000609606 BABAM1Q9NWV8 329 aa19.67■□□□□ 0.74
CSNK2A1-209ENST00000609606 STK32BQ9NY57 414 aa19.67■□□□□ 0.74
CSNK2A1-209ENST00000609606 C4BP0C0L5 1744 aa19.67■□□□□ 0.74
CSNK2A1-209ENST00000609606 TJP1Q07157 1748 aa19.67■□□□□ 0.74
CSNK2A1-209ENST00000609606 CCDC27Q2M243 656 aa19.66■□□□□ 0.74
CSNK2A1-209ENST00000609606 VSIG10Q8N0Z9 540 aa19.66■□□□□ 0.74
CSNK2A1-209ENST00000609606 AKT1S1Q96B36 256 aa19.66■□□□□ 0.74
CSNK2A1-209ENST00000609606 ITPK1Q13572 414 aa19.65■□□□□ 0.74
CSNK2A1-209ENST00000609606 SLC15A2Q16348 729 aa19.65■□□□□ 0.74
CSNK2A1-209ENST00000609606 NGEFQ8N5V2 710 aa19.65■□□□□ 0.74
CSNK2A1-209ENST00000609606 LINC00116Q8NCU8 138 aa19.64■□□□□ 0.73
CSNK2A1-209ENST00000609606 TUBGCP6Q96RT7 1819 aa19.64■□□□□ 0.73
CSNK2A1-209ENST00000609606 HEG1Q9ULI3 1381 aa19.63■□□□□ 0.73
CSNK2A1-209ENST00000609606 CALD1Q05682 793 aaKnown RBP19.63■□□□□ 0.73
CSNK2A1-209ENST00000609606 R3HDM1Q15032 1099 aaKnown RBP19.63■□□□□ 0.73
CSNK2A1-209ENST00000609606 ZNF827Q17R98 1081 aa19.63■□□□□ 0.73
CSNK2A1-209ENST00000609606 ZNF496Q96IT1 587 aaPredicted RBP19.63■□□□□ 0.73
CSNK2A1-209ENST00000609606 FMNL2Q96PY5 1086 aa19.63■□□□□ 0.73
CSNK2A1-209ENST00000609606 MYH14Q7Z406 1995 aaKnown RBP19.63■□□□□ 0.73
CSNK2A1-209ENST00000609606 UBR3Q6ZT12 1888 aa19.62■□□□□ 0.73
CSNK2A1-209ENST00000609606 KCNQ3O43525 872 aa19.62■□□□□ 0.73
CSNK2A1-209ENST00000609606 CNTNAP4Q9C0A0 1308 aa19.61■□□□□ 0.73
CSNK2A1-209ENST00000609606 NPM3O75607 178 aaKnown RBP19.61■□□□□ 0.73
CSNK2A1-209ENST00000609606 RC3H1Q5TC82 1133 aaKnown RBP19.61■□□□□ 0.73
CSNK2A1-209ENST00000609606 CHL1O00533 1208 aa19.6■□□□□ 0.73
CSNK2A1-209ENST00000609606 TEX13AQ9BXU3 409 aaPredicted RBP19.6■□□□□ 0.73
CSNK2A1-209ENST00000609606 MIS18AQ9NYP9 233 aa19.6■□□□□ 0.73
CSNK2A1-209ENST00000609606 TSPYL4Q9UJ04 414 aa19.6■□□□□ 0.73
CSNK2A1-209ENST00000609606 CASZ1Q86V15 1759 aa19.6■□□□□ 0.73
CSNK2A1-209ENST00000609606 PSDA5PKW4 1024 aaPredicted RBP19.59■□□□□ 0.73
CSNK2A1-209ENST00000609606 WWC1Q8IX03 1113 aa19.59■□□□□ 0.73
CSNK2A1-209ENST00000609606 DNAJC10Q8IXB1 793 aa19.59■□□□□ 0.73
CSNK2A1-209ENST00000609606 AK7Q96M32 723 aa19.59■□□□□ 0.73
CSNK2A1-209ENST00000609606 CFAP44Q96MT7 982 aa19.59■□□□□ 0.73
CSNK2A1-209ENST00000609606 TFCP2L1Q9NZI6 479 aa19.59■□□□□ 0.73
CSNK2A1-209ENST00000609606 SNRPA1P09661 255 aaKnown RBP19.57■□□□□ 0.72
CSNK2A1-209ENST00000609606 ZNF853P0CG23 659 aa19.57■□□□□ 0.72
CSNK2A1-209ENST00000609606 CYP19A1P11511 503 aaPredicted RBP19.57■□□□□ 0.72
CSNK2A1-209ENST00000609606 EIF4A1P60842 406 aaKnown RBP19.57■□□□□ 0.72
CSNK2A1-209ENST00000609606 IFT57Q9NWB7 429 aa19.57■□□□□ 0.72
CSNK2A1-209ENST00000609606 LAMB4A4D0S4 1761 aa19.57■□□□□ 0.72
CSNK2A1-209ENST00000609606 IL16Q14005 1332 aa19.56■□□□□ 0.72
CSNK2A1-209ENST00000609606 STARD3NLO95772 234 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms