RNA–Protein interactions for RNA: ENST00000608657.5

ITGB5-212, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-212ENST00000608657 TRIM35Q9UPQ4 493 aa11.6□□□□□ -0.55
ITGB5-212ENST00000608657 SUPT16HQ9Y5B9 1047 aaKnown RBP11.6□□□□□ -0.55
ITGB5-212ENST00000608657 KDM3BQ7LBC6 1761 aa11.59□□□□□ -0.55
ITGB5-212ENST00000608657 KCNQ2O43526 872 aa11.59□□□□□ -0.55
ITGB5-212ENST00000608657 TRIM37O94972 964 aa11.59□□□□□ -0.55
ITGB5-212ENST00000608657 ERICH6BQ5W0A0 696 aa11.59□□□□□ -0.55
ITGB5-212ENST00000608657 ILDR2Q71H61 639 aa11.59□□□□□ -0.55
ITGB5-212ENST00000608657 THUMPD2Q9BTF0 503 aaKnown RBP11.59□□□□□ -0.55
ITGB5-212ENST00000608657 CALD1Q05682 793 aaKnown RBP11.58□□□□□ -0.56
ITGB5-212ENST00000608657 NFATC2IPQ8NCF5 419 aa11.58□□□□□ -0.56
ITGB5-212ENST00000608657 BCL11BQ9C0K0 894 aaPredicted RBP11.58□□□□□ -0.56
ITGB5-212ENST00000608657 RGPD3A6NKT7 1758 aaPredicted RBP11.57□□□□□ -0.56
ITGB5-212ENST00000608657 RGPD4Q7Z3J3 1758 aa11.57□□□□□ -0.56
ITGB5-212ENST00000608657 UBR2Q8IWV8 1755 aa11.57□□□□□ -0.56
ITGB5-212ENST00000608657 SF3B2Q13435 895 aaKnown RBP11.57□□□□□ -0.56
ITGB5-212ENST00000608657 WWC1Q8IX03 1113 aa11.57□□□□□ -0.56
ITGB5-212ENST00000608657 PIGBQ92521 554 aa11.57□□□□□ -0.56
ITGB5-212ENST00000608657 LY75O60449 1722 aa11.57□□□□□ -0.56
ITGB5-212ENST00000608657 TAF7Q15545 349 aaPredicted RBP11.56□□□□□ -0.56
ITGB5-212ENST00000608657 PTF1AQ7RTS3 328 aa11.56□□□□□ -0.56
ITGB5-212ENST00000608657 TTC5Q8N0Z6 440 aa11.56□□□□□ -0.56
ITGB5-212ENST00000608657 BTBD11A6QL63 1104 aa11.55□□□□□ -0.56
ITGB5-212ENST00000608657 GNAI1P63096 354 aa11.55□□□□□ -0.56
ITGB5-212ENST00000608657 WDR63Q8IWG1 891 aa11.55□□□□□ -0.56
ITGB5-212ENST00000608657 SMARCC1Q92922 1105 aaPredicted RBP11.55□□□□□ -0.56
ITGB5-212ENST00000608657 LAS1LQ9Y4W2 734 aaKnown RBP11.55□□□□□ -0.56
ITGB5-212ENST00000608657 PALLDQ8WX93 1383 aa11.54□□□□□ -0.56
ITGB5-212ENST00000608657 APBA3O96018 575 aa11.54□□□□□ -0.56
ITGB5-212ENST00000608657 CFAP44Q96MT7 982 aa11.54□□□□□ -0.56
ITGB5-212ENST00000608657 IFT57Q9NWB7 429 aa11.54□□□□□ -0.56
ITGB5-212ENST00000608657 TSPYL4Q9UJ04 414 aa11.54□□□□□ -0.56
ITGB5-212ENST00000608657 IL16Q14005 1332 aa11.54□□□□□ -0.56
ITGB5-212ENST00000608657 ZBED9Q6R2W3 1325 aa11.54□□□□□ -0.56
ITGB5-212ENST00000608657 ZNF521Q96K83 1311 aa11.54□□□□□ -0.56
ITGB5-212ENST00000608657 BAG6P46379 1132 aa11.53□□□□□ -0.56
ITGB5-212ENST00000608657 SLC39A6Q13433 755 aa11.53□□□□□ -0.56
ITGB5-212ENST00000608657 ZNF790Q6PG37 636 aa11.53□□□□□ -0.56
ITGB5-212ENST00000608657 CCDC125Q86Z20 511 aa11.53□□□□□ -0.56
ITGB5-212ENST00000608657 ATG3Q9NT62 314 aa11.53□□□□□ -0.56
ITGB5-212ENST00000608657 BABAM1Q9NWV8 329 aa11.53□□□□□ -0.56
ITGB5-212ENST00000608657 MIS18AQ9NYP9 233 aa11.53□□□□□ -0.56
ITGB5-212ENST00000608657 ASAP1Q9ULH1 1129 aa11.53□□□□□ -0.56
ITGB5-212ENST00000608657 KCPQ6ZWJ8 1503 aa11.53□□□□□ -0.56
ITGB5-212ENST00000608657 ZNF831Q5JPB2 1677 aa11.52□□□□□ -0.56
ITGB5-212ENST00000608657 RREB1Q92766 1687 aa11.52□□□□□ -0.56
ITGB5-212ENST00000608657 TJP1Q07157 1748 aa11.52□□□□□ -0.56
ITGB5-212ENST00000608657 LAMB4A4D0S4 1761 aa11.52□□□□□ -0.57
ITGB5-212ENST00000608657 GOLGA2Q08379 1002 aa11.52□□□□□ -0.57
ITGB5-212ENST00000608657 RBM42Q9BTD8 480 aaKnown RBP11.52□□□□□ -0.57
ITGB5-212ENST00000608657 CICQ96RK0 1608 aaPredicted RBP11.52□□□□□ -0.57
ITGB5-212ENST00000608657 C5P01031 1676 aa11.52□□□□□ -0.57
ITGB5-212ENST00000608657 TAF1LQ8IZX4 1826 aa11.51□□□□□ -0.57
ITGB5-212ENST00000608657 CHL1O00533 1208 aa11.51□□□□□ -0.57
ITGB5-212ENST00000608657 ZNF853P0CG23 659 aa11.51□□□□□ -0.57
ITGB5-212ENST00000608657 UPF1Q92900 1129 aaKnown RBP eCLIP11.51□□□□□ -0.57
ITGB5-212ENST00000608657 MYH16Q9H6N6 1097 aa11.51□□□□□ -0.57
ITGB5-212ENST00000608657 MBIPQ9NS73 344 aa11.51□□□□□ -0.57
ITGB5-212ENST00000608657 EP400Q96L91 3159 aa11.51□□□□□ -0.57
ITGB5-212ENST00000608657 COL5A3P25940 1745 aaPredicted RBP11.5□□□□□ -0.57
ITGB5-212ENST00000608657 E9PSI1 815 aa11.5□□□□□ -0.57
ITGB5-212ENST00000608657 PLSCR1O15162 318 aa11.5□□□□□ -0.57
ITGB5-212ENST00000608657 KCNQ3O43525 872 aa11.5□□□□□ -0.57
ITGB5-212ENST00000608657 PTCD1O75127 700 aaKnown RBP11.5□□□□□ -0.57
ITGB5-212ENST00000608657 TSR2Q969E8 191 aaKnown RBP11.5□□□□□ -0.57
ITGB5-212ENST00000608657 FMNL2Q96PY5 1086 aa11.5□□□□□ -0.57
ITGB5-212ENST00000608657 NUP188Q5SRE5 1749 aa11.49□□□□□ -0.57
ITGB5-212ENST00000608657 EN1Q05925 392 aaPredicted RBP11.49□□□□□ -0.57
ITGB5-212ENST00000608657 ZNF496Q96IT1 587 aaPredicted RBP11.49□□□□□ -0.57
ITGB5-212ENST00000608657 CCNL1Q9UK58 526 aaPredicted RBP11.49□□□□□ -0.57
ITGB5-212ENST00000608657 FANCIQ9NVI1 1328 aa11.49□□□□□ -0.57
ITGB5-212ENST00000608657 HEG1Q9ULI3 1381 aa11.49□□□□□ -0.57
ITGB5-212ENST00000608657 LOC102724428A0A0B4J2F2 783 aa11.48□□□□□ -0.57
ITGB5-212ENST00000608657 ATP6V1AP38606 617 aa11.48□□□□□ -0.57
ITGB5-212ENST00000608657 SIK1P57059 783 aa11.48□□□□□ -0.57
ITGB5-212ENST00000608657 EIF4A1P60842 406 aaKnown RBP11.48□□□□□ -0.57
ITGB5-212ENST00000608657 FKBP8Q14318 412 aa11.48□□□□□ -0.57
ITGB5-212ENST00000608657 TXNRD1Q16881 649 aa11.48□□□□□ -0.57
ITGB5-212ENST00000608657 SLC27A3Q5K4L6 730 aa11.48□□□□□ -0.57
ITGB5-212ENST00000608657 DEFB132Q7Z7B7 95 aa11.48□□□□□ -0.57
ITGB5-212ENST00000608657 SPINK5Q9NQ38 1064 aaPredicted RBP11.48□□□□□ -0.57
ITGB5-212ENST00000608657 SLFN5Q08AF3 891 aa11.47□□□□□ -0.57
ITGB5-212ENST00000608657 EZH2Q15910 746 aaKnown RBP11.47□□□□□ -0.57
ITGB5-212ENST00000608657 VSIG10Q8N0Z9 540 aa11.47□□□□□ -0.57
ITGB5-212ENST00000608657 CDCA7LQ96GN5 454 aa11.47□□□□□ -0.57
ITGB5-212ENST00000608657 CAMKK2Q96RR4 588 aa11.47□□□□□ -0.57
ITGB5-212ENST00000608657 C4BP0C0L5 1744 aa11.46□□□□□ -0.57
ITGB5-212ENST00000608657 SNRPA1P09661 255 aaKnown RBP11.46□□□□□ -0.57
ITGB5-212ENST00000608657 HMGB2P26583 209 aaKnown RBP11.46□□□□□ -0.57
ITGB5-212ENST00000608657 SLC4A9Q96Q91 983 aa11.46□□□□□ -0.57
ITGB5-212ENST00000608657 TEX13AQ9BXU3 409 aaPredicted RBP11.46□□□□□ -0.57
ITGB5-212ENST00000608657 KCNQ4P56696 695 aa11.45□□□□□ -0.58
ITGB5-212ENST00000608657 EXOSC9Q06265 439 aaKnown RBP11.45□□□□□ -0.58
ITGB5-212ENST00000608657 ITPK1Q13572 414 aa11.45□□□□□ -0.58
ITGB5-212ENST00000608657 DNAJC10Q8IXB1 793 aa11.45□□□□□ -0.58
ITGB5-212ENST00000608657 ELL2O00472 640 aaPredicted RBP11.44□□□□□ -0.58
ITGB5-212ENST00000608657 GIGYF1O75420 1035 aaPredicted RBP11.44□□□□□ -0.58
ITGB5-212ENST00000608657 HOXB7P09629 217 aa11.44□□□□□ -0.58
ITGB5-212ENST00000608657 KRT24Q2M2I5 525 aa11.44□□□□□ -0.58
ITGB5-212ENST00000608657 DUSP27Q5VZP5 1158 aa11.44□□□□□ -0.58
ITGB5-212ENST00000608657 PROM2Q8N271 834 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms