RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 GDPD2Q9HCC8 539 aa18.5■□□□□ 0.55
LYSMD4-211ENST00000604213 TUBGCP6Q96RT7 1819 aa18.5■□□□□ 0.55
LYSMD4-211ENST00000604213 NRKQ7Z2Y5 1582 aa18.5■□□□□ 0.55
LYSMD4-211ENST00000604213 CCT4P50991 539 aaKnown RBP18.49■□□□□ 0.55
LYSMD4-211ENST00000604213 MYRIPQ8NFW9 859 aa18.49■□□□□ 0.55
LYSMD4-211ENST00000604213 ANO2Q9NQ90 1003 aa18.49■□□□□ 0.55
LYSMD4-211ENST00000604213 RIMBP3CA6NJZ7 1639 aa18.49■□□□□ 0.55
LYSMD4-211ENST00000604213 RIMBP3BA6NNM3 1639 aa18.49■□□□□ 0.55
LYSMD4-211ENST00000604213 RIMBP3Q9UFD9 1639 aa18.49■□□□□ 0.55
LYSMD4-211ENST00000604213 F6X3S4 739 aa18.49■□□□□ 0.55
LYSMD4-211ENST00000604213 CRB1P82279 1406 aa18.49■□□□□ 0.55
LYSMD4-211ENST00000604213 SSH2Q76I76 1423 aa18.49■□□□□ 0.55
LYSMD4-211ENST00000604213 MX1P20591 662 aa18.48■□□□□ 0.55
LYSMD4-211ENST00000604213 SLC4A10Q6U841 1118 aa18.48■□□□□ 0.55
LYSMD4-211ENST00000604213 SMAP1Q8IYB5 467 aaPredicted RBP18.48■□□□□ 0.55
LYSMD4-211ENST00000604213 FAM184AQ8NB25 1140 aa18.48■□□□□ 0.55
LYSMD4-211ENST00000604213 WDR33Q9C0J8 1336 aaKnown RBP18.48■□□□□ 0.55
LYSMD4-211ENST00000604213 GNAI2P04899 355 aa18.48■□□□□ 0.55
LYSMD4-211ENST00000604213 FOXD4L6Q3SYB3 417 aaPredicted RBP18.48■□□□□ 0.55
LYSMD4-211ENST00000604213 FOXD4L3Q6VB84 417 aaPredicted RBP18.48■□□□□ 0.55
LYSMD4-211ENST00000604213 NUDT16Q96DE0 195 aaKnown RBP18.48■□□□□ 0.55
LYSMD4-211ENST00000604213 NCKAP5LQ9HCH0 1330 aa18.47■□□□□ 0.55
LYSMD4-211ENST00000604213 PIBF1Q8WXW3 757 aa18.47■□□□□ 0.55
LYSMD4-211ENST00000604213 LRRCC1Q9C099 1032 aa18.47■□□□□ 0.55
LYSMD4-211ENST00000604213 STAG3Q9UJ98 1225 aa18.47■□□□□ 0.55
LYSMD4-211ENST00000604213 TMEM87AQ8NBN3 555 aa18.47■□□□□ 0.55
LYSMD4-211ENST00000604213 UPF3BQ9BZI7 483 aaKnown RBP18.47■□□□□ 0.55
LYSMD4-211ENST00000604213 MON2Q7Z3U7 1717 aa18.47■□□□□ 0.55
LYSMD4-211ENST00000604213 SETD1AO15047 1707 aaKnown RBP18.46■□□□□ 0.55
LYSMD4-211ENST00000604213 RILPL2Q969X0 211 aa18.46■□□□□ 0.55
LYSMD4-211ENST00000604213 ZNF830Q96NB3 372 aaPredicted RBP18.46■□□□□ 0.55
LYSMD4-211ENST00000604213 ARID3AQ99856 593 aa18.46■□□□□ 0.55
LYSMD4-211ENST00000604213 STAP2Q9UGK3 403 aa18.46■□□□□ 0.55
LYSMD4-211ENST00000604213 PLEKHG5O94827 1062 aa18.45■□□□□ 0.54
LYSMD4-211ENST00000604213 PRIMPOLQ96LW4 560 aa18.45■□□□□ 0.54
LYSMD4-211ENST00000604213 MIS18AQ9NYP9 233 aa18.45■□□□□ 0.54
LYSMD4-211ENST00000604213 USP25Q9UHP3 1055 aa18.45■□□□□ 0.54
LYSMD4-211ENST00000604213 C3P01024 1663 aa18.45■□□□□ 0.54
LYSMD4-211ENST00000604213 TRIM6-TRIM34B2RNG4 842 aa18.45■□□□□ 0.54
LYSMD4-211ENST00000604213 NOLC1Q14978 699 aaKnown RBP eCLIP18.45■□□□□ 0.54
LYSMD4-211ENST00000604213 CCDC183Q5T5S1 534 aa18.45■□□□□ 0.54
LYSMD4-211ENST00000604213 MPNDQ8N594 471 aa18.45■□□□□ 0.54
LYSMD4-211ENST00000604213 CCDC94Q9BW85 323 aaPredicted RBP18.45■□□□□ 0.54
LYSMD4-211ENST00000604213 SRCIN1Q9C0H9 1055 aa18.45■□□□□ 0.54
LYSMD4-211ENST00000604213 CCDC61Q9Y6R9 512 aa18.45■□□□□ 0.54
LYSMD4-211ENST00000604213 RPAP1Q9BWH6 1393 aaPredicted RBP18.44■□□□□ 0.54
LYSMD4-211ENST00000604213 UNC5CLQ8IV45 518 aa18.44■□□□□ 0.54
LYSMD4-211ENST00000604213 RICTORQ6R327 1708 aa18.44■□□□□ 0.54
LYSMD4-211ENST00000604213 DNTTIP2Q5QJE6 756 aaKnown RBP18.44■□□□□ 0.54
LYSMD4-211ENST00000604213 PNMA6EA0A0J9YXQ4 647 aa18.43■□□□□ 0.54
LYSMD4-211ENST00000604213 ADCY5O95622 1261 aa18.43■□□□□ 0.54
LYSMD4-211ENST00000604213 JARID2Q92833 1246 aaPredicted RBP18.43■□□□□ 0.54
LYSMD4-211ENST00000604213 GTF2F1P35269 517 aaKnown RBP eCLIP18.42■□□□□ 0.54
LYSMD4-211ENST00000604213 ATP8B2P98198 1209 aa18.42■□□□□ 0.54
LYSMD4-211ENST00000604213 IL25Q9H293 177 aa18.42■□□□□ 0.54
LYSMD4-211ENST00000604213 HSPA4P34932 840 aa18.42■□□□□ 0.54
LYSMD4-211ENST00000604213 HMGN5P82970 282 aaKnown RBP18.42■□□□□ 0.54
LYSMD4-211ENST00000604213 ZNF710Q8N1W2 664 aa18.42■□□□□ 0.54
LYSMD4-211ENST00000604213 TTC12Q9H892 705 aaPredicted RBP18.42■□□□□ 0.54
LYSMD4-211ENST00000604213 ZBTB7CA1YPR0 619 aa18.41■□□□□ 0.54
LYSMD4-211ENST00000604213 EPB41L2O43491 1005 aaKnown RBP18.41■□□□□ 0.54
LYSMD4-211ENST00000604213 SPTLC3Q9NUV7 552 aa18.41■□□□□ 0.54
LYSMD4-211ENST00000604213 CNPY2Q9Y2B0 182 aa18.41■□□□□ 0.54
LYSMD4-211ENST00000604213 A2ML1A8K2U0 1454 aa18.41■□□□□ 0.54
LYSMD4-211ENST00000604213 LETM1O95202 739 aaPredicted RBP18.41■□□□□ 0.54
LYSMD4-211ENST00000604213 AKAP12Q02952 1782 aa18.41■□□□□ 0.54
LYSMD4-211ENST00000604213 C17orf53Q8N3J3 647 aaPredicted RBP18.4■□□□□ 0.54
LYSMD4-211ENST00000604213 TSC1Q92574 1164 aa18.4■□□□□ 0.54
LYSMD4-211ENST00000604213 TSPYL4Q9UJ04 414 aa18.4■□□□□ 0.54
LYSMD4-211ENST00000604213 ARHGEF10O15013 1369 aa18.4■□□□□ 0.54
LYSMD4-211ENST00000604213 GNAI3P08754 354 aa18.4■□□□□ 0.54
LYSMD4-211ENST00000604213 HCLS1P14317 486 aaPredicted RBP18.4■□□□□ 0.54
LYSMD4-211ENST00000604213 AOX1Q06278 1338 aa18.4■□□□□ 0.54
LYSMD4-211ENST00000604213 TCHHQ07283 1943 aa18.39■□□□□ 0.54
LYSMD4-211ENST00000604213 ZSCAN22P10073 491 aaPredicted RBP18.39■□□□□ 0.53
LYSMD4-211ENST00000604213 TXNDC2Q86VQ3 553 aa18.39■□□□□ 0.53
LYSMD4-211ENST00000604213 METP08581 1390 aa18.38■□□□□ 0.53
LYSMD4-211ENST00000604213 FOXO3O43524 673 aa18.38■□□□□ 0.53
LYSMD4-211ENST00000604213 KDM4AO75164 1064 aa18.38■□□□□ 0.53
LYSMD4-211ENST00000604213 UBE2HP62256 183 aa18.38■□□□□ 0.53
LYSMD4-211ENST00000604213 FKBP5Q13451 457 aaPredicted RBP18.38■□□□□ 0.53
LYSMD4-211ENST00000604213 HSP90AB2PQ58FF8 381 aa18.38■□□□□ 0.53
LYSMD4-211ENST00000604213 RGPD1P0DJD0 1748 aa18.38■□□□□ 0.53
LYSMD4-211ENST00000604213 PRR36Q9H6K5 1346 aa18.37■□□□□ 0.53
LYSMD4-211ENST00000604213 TTC14Q96N46 770 aa18.37■□□□□ 0.53
LYSMD4-211ENST00000604213 PRDM10Q9NQV6 1147 aa18.37■□□□□ 0.53
LYSMD4-211ENST00000604213 ITSN1Q15811 1721 aa18.37■□□□□ 0.53
LYSMD4-211ENST00000604213 FUCA2Q9BTY2 467 aa18.37■□□□□ 0.53
LYSMD4-211ENST00000604213 FLIIQ13045 1269 aa18.36■□□□□ 0.53
LYSMD4-211ENST00000604213 MTHFSDQ2M296 383 aaKnown RBP18.36■□□□□ 0.53
LYSMD4-211ENST00000604213 STK31Q9BXU1 1019 aa18.36■□□□□ 0.53
LYSMD4-211ENST00000604213 LRRFIP2Q9Y608 721 aaKnown RBP18.36■□□□□ 0.53
LYSMD4-211ENST00000604213 PEAK1Q9H792 1746 aa18.36■□□□□ 0.53
LYSMD4-211ENST00000604213 TTC21BQ7Z4L5 1316 aa18.36■□□□□ 0.53
LYSMD4-211ENST00000604213 STX6O43752 255 aa18.35■□□□□ 0.53
LYSMD4-211ENST00000604213 SYT1P21579 422 aa18.35■□□□□ 0.53
LYSMD4-211ENST00000604213 SNX14Q9Y5W7 946 aa18.35■□□□□ 0.53
LYSMD4-211ENST00000604213 RAD50Q92878 1312 aa18.35■□□□□ 0.53
LYSMD4-211ENST00000604213 OVOS2A0A0J9YW53 1432 aa18.35■□□□□ 0.53
LYSMD4-211ENST00000604213 OVOS2Q6IE36 1432 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms