RNA–Protein interactions for RNA: ENST00000603946.5

NOLC1-208, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best)

Gene NOLC1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-208ENST00000603946 ZNF496Q96IT1 587 aaPredicted RBP10.55□□□□□ -0.72
NOLC1-208ENST00000603946 TMOD3Q9NYL9 352 aa10.55□□□□□ -0.72
NOLC1-208ENST00000603946 GTF3C3Q9Y5Q9 886 aa10.55□□□□□ -0.72
NOLC1-208ENST00000603946 ABCA3Q99758 1704 aa10.55□□□□□ -0.72
NOLC1-208ENST00000603946 MYL6BP14649 208 aa10.55□□□□□ -0.72
NOLC1-208ENST00000603946 AIMP1Q12904 312 aaKnown RBP10.55□□□□□ -0.72
NOLC1-208ENST00000603946 TAF7Q15545 349 aaPredicted RBP10.55□□□□□ -0.72
NOLC1-208ENST00000603946 KRT27Q7Z3Y8 459 aa10.55□□□□□ -0.72
NOLC1-208ENST00000603946 KIF24Q5T7B8 1368 aa10.55□□□□□ -0.72
NOLC1-208ENST00000603946 CRYBG1Q9Y4K1 1723 aa10.55□□□□□ -0.72
NOLC1-208ENST00000603946 RBM6P78332 1123 aaKnown RBP10.54□□□□□ -0.72
NOLC1-208ENST00000603946 USP16Q9Y5T5 823 aa10.54□□□□□ -0.72
NOLC1-208ENST00000603946 PCDH11XQ9BZA7 1347 aa10.54□□□□□ -0.72
NOLC1-208ENST00000603946 PCDH11YQ9BZA8 1340 aa10.54□□□□□ -0.72
NOLC1-208ENST00000603946 DCAF5Q96JK2 942 aa10.53□□□□□ -0.72
NOLC1-208ENST00000603946 SLC52A2Q9HAB3 445 aa10.53□□□□□ -0.72
NOLC1-208ENST00000603946 ZNF521Q96K83 1311 aa10.53□□□□□ -0.72
NOLC1-208ENST00000603946 C20orf194Q5TEA3 1177 aa10.53□□□□□ -0.72
NOLC1-208ENST00000603946 DEFB132Q7Z7B7 95 aa10.53□□□□□ -0.72
NOLC1-208ENST00000603946 TTC5Q8N0Z6 440 aa10.53□□□□□ -0.72
NOLC1-208ENST00000603946 CFAP44Q96MT7 982 aa10.52□□□□□ -0.72
NOLC1-208ENST00000603946 LMO7Q8WWI1 1683 aa10.52□□□□□ -0.73
NOLC1-208ENST00000603946 A1BGP04217 495 aa10.52□□□□□ -0.73
NOLC1-208ENST00000603946 TWISTNBQ3B726 338 aaPredicted RBP10.52□□□□□ -0.73
NOLC1-208ENST00000603946 ZNF790Q6PG37 636 aa10.52□□□□□ -0.73
NOLC1-208ENST00000603946 KDM6AO15550 1401 aaPredicted RBP10.52□□□□□ -0.73
NOLC1-208ENST00000603946 E9PSI1 815 aa10.52□□□□□ -0.73
NOLC1-208ENST00000603946 CANXP27824 592 aaKnown RBP10.51□□□□□ -0.73
NOLC1-208ENST00000603946 PROSER3Q2NL68 480 aa10.51□□□□□ -0.73
NOLC1-208ENST00000603946 PLCH1Q4KWH8 1693 aa10.51□□□□□ -0.73
NOLC1-208ENST00000603946 GNAI1P63096 354 aa10.51□□□□□ -0.73
NOLC1-208ENST00000603946 RTL5Q5HYW3 569 aaPredicted RBP10.51□□□□□ -0.73
NOLC1-208ENST00000603946 BARGINQ6ZT62 677 aa10.51□□□□□ -0.73
NOLC1-208ENST00000603946 G2E3Q7L622 706 aa10.51□□□□□ -0.73
NOLC1-208ENST00000603946 ATG3Q9NT62 314 aa10.51□□□□□ -0.73
NOLC1-208ENST00000603946 RCAN3Q9UKA8 241 aa10.51□□□□□ -0.73
NOLC1-208ENST00000603946 OVOS2A0A0G2JMS6 1433 aa10.51□□□□□ -0.73
NOLC1-208ENST00000603946 CHL1O00533 1208 aa10.5□□□□□ -0.73
NOLC1-208ENST00000603946 LMOD3Q0VAK6 560 aa10.5□□□□□ -0.73
NOLC1-208ENST00000603946 PHAXQ9H814 394 aaKnown RBP10.5□□□□□ -0.73
NOLC1-208ENST00000603946 COL14A1Q05707 1796 aaKnown RBP10.5□□□□□ -0.73
NOLC1-208ENST00000603946 F6X3S4 739 aa10.5□□□□□ -0.73
NOLC1-208ENST00000603946 WDR63Q8IWG1 891 aa10.5□□□□□ -0.73
NOLC1-208ENST00000603946 DNAJC10Q8IXB1 793 aa10.5□□□□□ -0.73
NOLC1-208ENST00000603946 SSH1Q8WYL5 1049 aa10.5□□□□□ -0.73
NOLC1-208ENST00000603946 JARID2Q92833 1246 aaPredicted RBP10.5□□□□□ -0.73
NOLC1-208ENST00000603946 SLC4A9Q96Q91 983 aa10.5□□□□□ -0.73
NOLC1-208ENST00000603946 SMC4Q9NTJ3 1288 aa10.5□□□□□ -0.73
NOLC1-208ENST00000603946 COL22A1Q8NFW1 1626 aaPredicted RBP10.5□□□□□ -0.73
NOLC1-208ENST00000603946 APBA3O96018 575 aa10.5□□□□□ -0.73
NOLC1-208ENST00000603946 SLC4A2P04920 1241 aa10.5□□□□□ -0.73
NOLC1-208ENST00000603946 FKBP8Q14318 412 aa10.5□□□□□ -0.73
NOLC1-208ENST00000603946 MYH16Q9H6N6 1097 aa10.5□□□□□ -0.73
NOLC1-208ENST00000603946 THRAP3Q9Y2W1 955 aaKnown RBP10.5□□□□□ -0.73
NOLC1-208ENST00000603946 PHF14O94880 888 aa10.49□□□□□ -0.73
NOLC1-208ENST00000603946 SLC4A10Q6U841 1118 aa10.49□□□□□ -0.73
NOLC1-208ENST00000603946 FAM177BA6PVY3 158 aa10.49□□□□□ -0.73
NOLC1-208ENST00000603946 ATP6V1AP38606 617 aa10.49□□□□□ -0.73
NOLC1-208ENST00000603946 EN1Q05925 392 aaPredicted RBP10.49□□□□□ -0.73
NOLC1-208ENST00000603946 ILDR2Q71H61 639 aa10.49□□□□□ -0.73
NOLC1-208ENST00000603946 NPM2Q86SE8 214 aaKnown RBP10.49□□□□□ -0.73
NOLC1-208ENST00000603946 VAMP4O75379 141 aa10.48□□□□□ -0.73
NOLC1-208ENST00000603946 EIF4A1P60842 406 aaKnown RBP10.48□□□□□ -0.73
NOLC1-208ENST00000603946 DLG5Q8TDM6 1919 aa10.48□□□□□ -0.73
NOLC1-208ENST00000603946 PANK1Q8TE04 598 aa10.48□□□□□ -0.73
NOLC1-208ENST00000603946 HDGFL1Q5TGJ6 251 aa10.48□□□□□ -0.73
NOLC1-208ENST00000603946 IFT57Q9NWB7 429 aa10.48□□□□□ -0.73
NOLC1-208ENST00000603946 CHPF2Q9P2E5 772 aa10.48□□□□□ -0.73
NOLC1-208ENST00000603946 PLCB2Q00722 1185 aa10.48□□□□□ -0.73
NOLC1-208ENST00000603946 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.48□□□□□ -0.735e-7■□□□□ 9.7
NOLC1-208ENST00000603946 RGPD1P0DJD0 1748 aa10.48□□□□□ -0.73
NOLC1-208ENST00000603946 GLI3P10071 1580 aa10.48□□□□□ -0.73
NOLC1-208ENST00000603946 ZNF853P0CG23 659 aa10.47□□□□□ -0.73
NOLC1-208ENST00000603946 MSH5O43196 834 aa10.47□□□□□ -0.73
NOLC1-208ENST00000603946 CCDC27Q2M243 656 aa10.47□□□□□ -0.73
NOLC1-208ENST00000603946 NOB1Q9ULX3 412 aaKnown RBP10.47□□□□□ -0.73
NOLC1-208ENST00000603946 FAM208AQ9UK61 1670 aaKnown RBP10.46□□□□□ -0.73
NOLC1-208ENST00000603946 ATRNO75882 1429 aa10.46□□□□□ -0.73
NOLC1-208ENST00000603946 HSP90AB1P08238 724 aaKnown RBP10.46□□□□□ -0.73
NOLC1-208ENST00000603946 AMIGO3Q86WK7 504 aa10.46□□□□□ -0.73
NOLC1-208ENST00000603946 TBC1D2BQ9UPU7 963 aa10.46□□□□□ -0.73
NOLC1-208ENST00000603946 GIGYF1O75420 1035 aaPredicted RBP10.46□□□□□ -0.74
NOLC1-208ENST00000603946 RARSP54136 660 aaKnown RBP10.46□□□□□ -0.74
NOLC1-208ENST00000603946 ITPK1Q13572 414 aa10.45□□□□□ -0.74
NOLC1-208ENST00000603946 CCDC24Q8N4L8 307 aa10.45□□□□□ -0.74
NOLC1-208ENST00000603946 LRRC4BQ9NT99 713 aa10.45□□□□□ -0.74
NOLC1-208ENST00000603946 COG6Q9Y2V7 657 aa10.45□□□□□ -0.74
NOLC1-208ENST00000603946 DISP2A7MBM2 1401 aa10.45□□□□□ -0.74
NOLC1-208ENST00000603946 ONECUT3O60422 494 aaPredicted RBP10.45□□□□□ -0.74
NOLC1-208ENST00000603946 CDCA7Q9BWT1 371 aaPredicted RBP10.45□□□□□ -0.74
NOLC1-208ENST00000603946 CEMIPQ8WUJ3 1361 aa10.45□□□□□ -0.74
NOLC1-208ENST00000603946 USP54Q70EL1 1684 aa10.45□□□□□ -0.74
NOLC1-208ENST00000603946 LOC102724428A0A0B4J2F2 783 aa10.45□□□□□ -0.74
NOLC1-208ENST00000603946 RLBP1P12271 317 aa10.45□□□□□ -0.74
NOLC1-208ENST00000603946 SIK1P57059 783 aa10.45□□□□□ -0.74
NOLC1-208ENST00000603946 TRMT2AQ8IZ69 625 aaKnown RBP10.45□□□□□ -0.74
NOLC1-208ENST00000603946 ZBTB3Q9H5J0 574 aa10.45□□□□□ -0.74
NOLC1-208ENST00000603946 RGS12O14924 1447 aa10.44□□□□□ -0.74
NOLC1-208ENST00000603946 ERVV-2B6SEH9 535 aa10.44□□□□□ -0.74
NOLC1-208ENST00000603946 EZH2Q15910 746 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms