RNA–Protein interactions for RNA: ENST00000603334.1

DDX55P1-201, Transcript of DEAD-box helicase 55 pseudogene 1, humanhuman

BASIC

Gene DDX55P1, Length 1,414 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55P1-201ENST00000603334 RSPH6AQ9H0K4 717 aa13.46□□□□□ -0.26
DDX55P1-201ENST00000603334 TUBGCP6Q96RT7 1819 aa13.45□□□□□ -0.26
DDX55P1-201ENST00000603334 TMPOP42166 694 aaKnown RBP13.45□□□□□ -0.26
DDX55P1-201ENST00000603334 RIPK4P57078 832 aa13.45□□□□□ -0.26
DDX55P1-201ENST00000603334 NKX1-1Q15270 411 aaPredicted RBP13.45□□□□□ -0.26
DDX55P1-201ENST00000603334 HSP90AB1P08238 724 aaKnown RBP13.44□□□□□ -0.26
DDX55P1-201ENST00000603334 TXNRD1Q16881 649 aa13.44□□□□□ -0.26
DDX55P1-201ENST00000603334 WWC1Q8IX03 1113 aa13.44□□□□□ -0.26
DDX55P1-201ENST00000603334 IFNL2Q8IZJ0 200 aa13.44□□□□□ -0.26
DDX55P1-201ENST00000603334 QSER1Q2KHR3 1735 aa13.43□□□□□ -0.26
DDX55P1-201ENST00000603334 PDGFDQ9GZP0 370 aaPredicted RBP13.43□□□□□ -0.26
DDX55P1-201ENST00000603334 CYP27B1O15528 508 aa13.42□□□□□ -0.26
DDX55P1-201ENST00000603334 HMGB2P26583 209 aaKnown RBP13.42□□□□□ -0.26
DDX55P1-201ENST00000603334 AEBP1Q8IUX7 1158 aa13.42□□□□□ -0.26
DDX55P1-201ENST00000603334 SLFN5Q08AF3 891 aa13.41□□□□□ -0.26
DDX55P1-201ENST00000603334 NFE2L2Q16236 605 aa13.41□□□□□ -0.26
DDX55P1-201ENST00000603334 WDR63Q8IWG1 891 aa13.41□□□□□ -0.26
DDX55P1-201ENST00000603334 PHACTR3Q96KR7 559 aa13.41□□□□□ -0.26
DDX55P1-201ENST00000603334 LRRC4BQ9NT99 713 aa13.41□□□□□ -0.26
DDX55P1-201ENST00000603334 DLG5Q8TDM6 1919 aa13.41□□□□□ -0.26
DDX55P1-201ENST00000603334 ZNF521Q96K83 1311 aa13.41□□□□□ -0.26
DDX55P1-201ENST00000603334 E9PSI1 815 aa13.4□□□□□ -0.26
DDX55P1-201ENST00000603334 PHKG2P15735 406 aa13.4□□□□□ -0.26
DDX55P1-201ENST00000603334 CCDC27Q2M243 656 aa13.4□□□□□ -0.26
DDX55P1-201ENST00000603334 TAF1LQ8IZX4 1826 aa13.4□□□□□ -0.26
DDX55P1-201ENST00000603334 FKBP8Q14318 412 aa13.39□□□□□ -0.27
DDX55P1-201ENST00000603334 NBPF14Q5TI25 921 aa13.39□□□□□ -0.27
DDX55P1-201ENST00000603334 COL24A1Q17RW2 1714 aa13.39□□□□□ -0.27
DDX55P1-201ENST00000603334 PRIM1P49642 420 aaKnown RBP13.39□□□□□ -0.27
DDX55P1-201ENST00000603334 C1orf141Q5JVX7 400 aa13.39□□□□□ -0.27
DDX55P1-201ENST00000603334 DCAF5Q96JK2 942 aa13.39□□□□□ -0.27
DDX55P1-201ENST00000603334 FOXD4L1Q9NU39 408 aa13.39□□□□□ -0.27
DDX55P1-201ENST00000603334 ERVV-2B6SEH9 535 aa13.38□□□□□ -0.27
DDX55P1-201ENST00000603334 LMOD3Q0VAK6 560 aa13.38□□□□□ -0.27
DDX55P1-201ENST00000603334 ZNF827Q17R98 1081 aa13.38□□□□□ -0.27
DDX55P1-201ENST00000603334 AKAP4Q5JQC9 854 aa13.38□□□□□ -0.27
DDX55P1-201ENST00000603334 ZNF530Q6P9A1 599 aaPredicted RBP13.38□□□□□ -0.27
DDX55P1-201ENST00000603334 GAS2L2Q8NHY3 880 aa13.38□□□□□ -0.27
DDX55P1-201ENST00000603334 RCAN3Q9UKA8 241 aa13.38□□□□□ -0.27
DDX55P1-201ENST00000603334 LAS1LQ9Y4W2 734 aaKnown RBP13.38□□□□□ -0.27
DDX55P1-201ENST00000603334 C5P01031 1676 aa13.38□□□□□ -0.27
DDX55P1-201ENST00000603334 UTRNP46939 3433 aa13.37□□□□□ -0.27
DDX55P1-201ENST00000603334 SLC15A2Q16348 729 aa13.37□□□□□ -0.27
DDX55P1-201ENST00000603334 DUSP27Q5VZP5 1158 aa13.37□□□□□ -0.27
DDX55P1-201ENST00000603334 MYH16Q9H6N6 1097 aa13.37□□□□□ -0.27
DDX55P1-201ENST00000603334 SPINK5Q9NQ38 1064 aaPredicted RBP13.37□□□□□ -0.27
DDX55P1-201ENST00000603334 TRIM35Q9UPQ4 493 aa13.37□□□□□ -0.27
DDX55P1-201ENST00000603334 IRX6P78412 446 aaPredicted RBP13.36□□□□□ -0.27
DDX55P1-201ENST00000603334 SLC27A3Q5K4L6 730 aa13.36□□□□□ -0.27
DDX55P1-201ENST00000603334 RNF39Q9H2S5 420 aa13.36□□□□□ -0.27
DDX55P1-201ENST00000603334 VIRMAQ69YN4 1812 aaKnown RBP13.35□□□□□ -0.27
DDX55P1-201ENST00000603334 SLC4A2P04920 1241 aa13.35□□□□□ -0.27
DDX55P1-201ENST00000603334 KCNQ4P56696 695 aa13.35□□□□□ -0.27
DDX55P1-201ENST00000603334 CALD1Q05682 793 aaKnown RBP13.35□□□□□ -0.27
DDX55P1-201ENST00000603334 SMARCC1Q92922 1105 aaPredicted RBP13.35□□□□□ -0.27
DDX55P1-201ENST00000603334 SYTL4Q96C24 671 aaPredicted RBP13.35□□□□□ -0.27
DDX55P1-201ENST00000603334 C1QBPQ07021 282 aaKnown RBP13.34□□□□□ -0.27
DDX55P1-201ENST00000603334 TRMT2AQ8IZ69 625 aaKnown RBP13.34□□□□□ -0.27
DDX55P1-201ENST00000603334 RTF1Q92541 710 aaKnown RBP13.34□□□□□ -0.27
DDX55P1-201ENST00000603334 AKT1S1Q96B36 256 aa13.34□□□□□ -0.27
DDX55P1-201ENST00000603334 PTGER2P43116 358 aa13.33□□□□□ -0.28
DDX55P1-201ENST00000603334 MTHFSDQ2M296 383 aaKnown RBP13.33□□□□□ -0.28
DDX55P1-201ENST00000603334 TMOD3Q9NYL9 352 aa13.33□□□□□ -0.28
DDX55P1-201ENST00000603334 GOLGB1Q14789 3259 aaKnown RBP13.33□□□□□ -0.28
DDX55P1-201ENST00000603334 HTATSF1O43719 755 aaKnown RBP13.32□□□□□ -0.28
DDX55P1-201ENST00000603334 SGIP1Q9BQI5 828 aa13.32□□□□□ -0.28
DDX55P1-201ENST00000603334 THUMPD2Q9BTF0 503 aaKnown RBP13.32□□□□□ -0.28
DDX55P1-201ENST00000603334 STK32BQ9NY57 414 aa13.32□□□□□ -0.28
DDX55P1-201ENST00000603334 IL16Q14005 1332 aa13.32□□□□□ -0.28
DDX55P1-201ENST00000603334 GNAT3A8MTJ3 354 aa13.31□□□□□ -0.28
DDX55P1-201ENST00000603334 DCTN1Q14203 1278 aa13.31□□□□□ -0.28
DDX55P1-201ENST00000603334 MPRIPQ6WCQ1 1025 aa13.31□□□□□ -0.28
DDX55P1-201ENST00000603334 PIGBQ92521 554 aa13.31□□□□□ -0.28
DDX55P1-201ENST00000603334 KDM6AO15550 1401 aaPredicted RBP13.31□□□□□ -0.28
DDX55P1-201ENST00000603334 UBR3Q6ZT12 1888 aa13.31□□□□□ -0.28
DDX55P1-201ENST00000603334 SCN11AQ9UI33 1791 aa13.31□□□□□ -0.28
DDX55P1-201ENST00000603334 C4BP0C0L5 1744 aa13.31□□□□□ -0.28
DDX55P1-201ENST00000603334 ZBTB7AO95365 584 aa13.3□□□□□ -0.28
DDX55P1-201ENST00000603334 CABP4P57796 275 aa13.3□□□□□ -0.28
DDX55P1-201ENST00000603334 GNAI1P63096 354 aa13.3□□□□□ -0.28
DDX55P1-201ENST00000603334 TSR2Q969E8 191 aaKnown RBP13.3□□□□□ -0.28
DDX55P1-201ENST00000603334 SPON1Q9HCB6 807 aa13.3□□□□□ -0.28
DDX55P1-201ENST00000603334 MAP3K5Q99683 1374 aa13.3□□□□□ -0.28
DDX55P1-201ENST00000603334 MCM10Q7L590 875 aa13.3□□□□□ -0.28
DDX55P1-201ENST00000603334 ZNF831Q5JPB2 1677 aa13.29□□□□□ -0.28
DDX55P1-201ENST00000603334 PNPLA7Q6ZV29 1317 aa13.29□□□□□ -0.28
DDX55P1-201ENST00000603334 PALLDQ8WX93 1383 aa13.29□□□□□ -0.28
DDX55P1-201ENST00000603334 ADAMTS7Q9UKP4 1686 aa13.29□□□□□ -0.28
DDX55P1-201ENST00000603334 RNMTO43148 476 aaKnown RBP13.29□□□□□ -0.28
DDX55P1-201ENST00000603334 EXOSC9Q06265 439 aaKnown RBP13.29□□□□□ -0.28
DDX55P1-201ENST00000603334 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.29□□□□□ -0.28
DDX55P1-201ENST00000603334 SLC52A2Q9HAB3 445 aa13.29□□□□□ -0.28
DDX55P1-201ENST00000603334 COL5A3P25940 1745 aaPredicted RBP13.28□□□□□ -0.28
DDX55P1-201ENST00000603334 MYCNP04198 464 aaPredicted RBP13.28□□□□□ -0.28
DDX55P1-201ENST00000603334 RRP1P56182 461 aaKnown RBP13.28□□□□□ -0.28
DDX55P1-201ENST00000603334 IFT57Q9NWB7 429 aa13.28□□□□□ -0.28
DDX55P1-201ENST00000603334 CCNL1Q9UK58 526 aaPredicted RBP13.28□□□□□ -0.28
DDX55P1-201ENST00000603334 FANCIQ9NVI1 1328 aa13.28□□□□□ -0.28
DDX55P1-201ENST00000603334 AMIGO3Q86WK7 504 aa13.27□□□□□ -0.29
DDX55P1-201ENST00000603334 ATF5Q9Y2D1 282 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms