RNA–Protein interactions for RNA: ENST00000600646.5

FKRP-220, Transcript of fukutin related protein, humanhuman

TSL 3

Gene FKRP, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-220ENST00000600646 LGR6Q9HBX8 967 aa10.15□□□□□ -0.78
FKRP-220ENST00000600646 SCN11AQ9UI33 1791 aa10.15□□□□□ -0.78
FKRP-220ENST00000600646 TOGARAM1Q9Y4F4 1720 aa10.15□□□□□ -0.78
FKRP-220ENST00000600646 KDM6AO15550 1401 aaPredicted RBP10.15□□□□□ -0.79
FKRP-220ENST00000600646 LY75O60449 1722 aa10.14□□□□□ -0.79
FKRP-220ENST00000600646 LOC102724428A0A0B4J2F2 783 aa10.14□□□□□ -0.79
FKRP-220ENST00000600646 PSDA5PKW4 1024 aaPredicted RBP10.14□□□□□ -0.79
FKRP-220ENST00000600646 SIK1P57059 783 aa10.14□□□□□ -0.79
FKRP-220ENST00000600646 NFE2L2Q16236 605 aa10.14□□□□□ -0.79
FKRP-220ENST00000600646 FLAD1Q8NFF5 587 aa10.14□□□□□ -0.79
FKRP-220ENST00000600646 MRS2Q9HD23 443 aa10.14□□□□□ -0.79
FKRP-220ENST00000600646 ATG3Q9NT62 314 aa10.14□□□□□ -0.79
FKRP-220ENST00000600646 TFCP2L1Q9NZI6 479 aa10.14□□□□□ -0.79
FKRP-220ENST00000600646 ASAP1Q9ULH1 1129 aa10.14□□□□□ -0.79
FKRP-220ENST00000600646 BTBD11A6QL63 1104 aa10.13□□□□□ -0.79
FKRP-220ENST00000600646 PNISRQ8TF01 805 aaKnown RBP10.13□□□□□ -0.79
FKRP-220ENST00000600646 AK7Q96M32 723 aa10.13□□□□□ -0.79
FKRP-220ENST00000600646 PLEKHF1Q96S99 279 aa10.13□□□□□ -0.79
FKRP-220ENST00000600646 PTCD1O75127 700 aaKnown RBP10.12□□□□□ -0.79
FKRP-220ENST00000600646 RIPK4P57078 832 aa10.12□□□□□ -0.79
FKRP-220ENST00000600646 IL17REQ8NFR9 667 aa10.12□□□□□ -0.79
FKRP-220ENST00000600646 TEX13AQ9BXU3 409 aaPredicted RBP10.12□□□□□ -0.79
FKRP-220ENST00000600646 LRRC4BQ9NT99 713 aa10.12□□□□□ -0.79
FKRP-220ENST00000600646 ADAMTS8Q9UP79 889 aa10.12□□□□□ -0.79
FKRP-220ENST00000600646 TAF7Q15545 349 aaPredicted RBP10.11□□□□□ -0.79
FKRP-220ENST00000600646 NPM2Q86SE8 214 aaKnown RBP10.11□□□□□ -0.79
FKRP-220ENST00000600646 SLC16A10Q8TF71 515 aa10.11□□□□□ -0.79
FKRP-220ENST00000600646 VIRMAQ69YN4 1812 aaKnown RBP10.11□□□□□ -0.79
FKRP-220ENST00000600646 MRC1P22897 1456 aa10.1□□□□□ -0.79
FKRP-220ENST00000600646 C5P01031 1676 aa10.1□□□□□ -0.79
FKRP-220ENST00000600646 TMPOP42166 694 aaKnown RBP10.1□□□□□ -0.79
FKRP-220ENST00000600646 KCNQ4P56696 695 aa10.1□□□□□ -0.79
FKRP-220ENST00000600646 CALD1Q05682 793 aaKnown RBP10.1□□□□□ -0.79
FKRP-220ENST00000600646 NEUROD2Q15784 382 aa10.1□□□□□ -0.79
FKRP-220ENST00000600646 ZNF790Q6PG37 636 aa10.1□□□□□ -0.79
FKRP-220ENST00000600646 MCM10Q7L590 875 aa10.1□□□□□ -0.79
FKRP-220ENST00000600646 CCDC146Q8IYE0 955 aa10.1□□□□□ -0.79
FKRP-220ENST00000600646 VSIG10Q8N0Z9 540 aa10.1□□□□□ -0.79
FKRP-220ENST00000600646 AKT1S1Q96B36 256 aa10.1□□□□□ -0.79
FKRP-220ENST00000600646 FMNL2Q96PY5 1086 aa10.1□□□□□ -0.79
FKRP-220ENST00000600646 SPON1Q9HCB6 807 aa10.1□□□□□ -0.79
FKRP-220ENST00000600646 CEMIPQ8WUJ3 1361 aa10.1□□□□□ -0.79
FKRP-220ENST00000600646 ADAMTS7Q9UKP4 1686 aa10.09□□□□□ -0.79
FKRP-220ENST00000600646 STARD3NLO95772 234 aa10.09□□□□□ -0.79
FKRP-220ENST00000600646 SLC39A6Q13433 755 aa10.09□□□□□ -0.79
FKRP-220ENST00000600646 RC3H1Q5TC82 1133 aaKnown RBP10.09□□□□□ -0.79
FKRP-220ENST00000600646 ANO8Q9HCE9 1232 aaPredicted RBP10.09□□□□□ -0.79
FKRP-220ENST00000600646 RTCBQ9Y3I0 505 aaKnown RBP10.09□□□□□ -0.79
FKRP-220ENST00000600646 ZNF831Q5JPB2 1677 aa10.09□□□□□ -0.79
FKRP-220ENST00000600646 GNPATO15228 680 aa10.08□□□□□ -0.8
FKRP-220ENST00000600646 SSFA2P28290 1259 aa10.08□□□□□ -0.8
FKRP-220ENST00000600646 DCTN1Q14203 1278 aa10.08□□□□□ -0.8
FKRP-220ENST00000600646 TRAPPC3LQ5T215 181 aa10.08□□□□□ -0.8
FKRP-220ENST00000600646 MTFR1LQ9H019 292 aa10.08□□□□□ -0.8
FKRP-220ENST00000600646 BABAM1Q9NWV8 329 aa10.08□□□□□ -0.8
FKRP-220ENST00000600646 PPP1R1BQ9UD71 204 aaPredicted RBP10.08□□□□□ -0.8
FKRP-220ENST00000600646 PAPPAQ13219 1627 aa10.07□□□□□ -0.8
FKRP-220ENST00000600646 C4BP0C0L5 1744 aa10.07□□□□□ -0.8
FKRP-220ENST00000600646 POLD1P28340 1107 aa10.07□□□□□ -0.8
FKRP-220ENST00000600646 ITPK1Q13572 414 aa10.07□□□□□ -0.8
FKRP-220ENST00000600646 ZNF827Q17R98 1081 aa10.07□□□□□ -0.8
FKRP-220ENST00000600646 DIEXFQ68CQ4 756 aaKnown RBP10.07□□□□□ -0.8
FKRP-220ENST00000600646 LINC00116Q8NCU8 138 aa10.07□□□□□ -0.8
FKRP-220ENST00000600646 DLG5Q8TDM6 1919 aa10.07□□□□□ -0.8
FKRP-220ENST00000600646 TAF1LQ8IZX4 1826 aa10.07□□□□□ -0.8
FKRP-220ENST00000600646 QSER1Q2KHR3 1735 aa10.07□□□□□ -0.8
FKRP-220ENST00000600646 CNTNAP4Q9C0A0 1308 aa10.07□□□□□ -0.8
FKRP-220ENST00000600646 APAF1O14727 1248 aa10.06□□□□□ -0.8
FKRP-220ENST00000600646 PHF14O94880 888 aa10.06□□□□□ -0.8
FKRP-220ENST00000600646 SNRPA1P09661 255 aaKnown RBP10.06□□□□□ -0.8
FKRP-220ENST00000600646 RFC4P35249 363 aa10.06□□□□□ -0.8
FKRP-220ENST00000600646 FAM9BQ8IZU0 186 aa10.06□□□□□ -0.8
FKRP-220ENST00000600646 NGEFQ8N5V2 710 aa10.06□□□□□ -0.8
FKRP-220ENST00000600646 TSPYL4Q9UJ04 414 aa10.06□□□□□ -0.8
FKRP-220ENST00000600646 RRP7AQ9Y3A4 280 aaKnown RBP10.06□□□□□ -0.8
FKRP-220ENST00000600646 PNPLA7Q6ZV29 1317 aa10.06□□□□□ -0.8
FKRP-220ENST00000600646 HEG1Q9ULI3 1381 aa10.05□□□□□ -0.8
FKRP-220ENST00000600646 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.05□□□□□ -0.8
FKRP-220ENST00000600646 CCER2I3L3R5 266 aa10.05□□□□□ -0.8
FKRP-220ENST00000600646 RPS6KA4O75676 772 aa10.05□□□□□ -0.8
FKRP-220ENST00000600646 ZBTB7AO95365 584 aa10.05□□□□□ -0.8
FKRP-220ENST00000600646 CRKLP46109 303 aaKnown RBP10.05□□□□□ -0.8
FKRP-220ENST00000600646 DNAJC10Q8IXB1 793 aa10.05□□□□□ -0.8
FKRP-220ENST00000600646 ZNF496Q96IT1 587 aaPredicted RBP10.05□□□□□ -0.8
FKRP-220ENST00000600646 CCDC87Q9NVE4 849 aa10.05□□□□□ -0.8
FKRP-220ENST00000600646 LAS1LQ9Y4W2 734 aaKnown RBP10.05□□□□□ -0.8
FKRP-220ENST00000600646 SIPA1L3O60292 1781 aaPredicted RBP10.05□□□□□ -0.8
FKRP-220ENST00000600646 A0A087WZG4 1122 aa10.04□□□□□ -0.8
FKRP-220ENST00000600646 CCDC184Q52MB2 194 aa10.04□□□□□ -0.8
FKRP-220ENST00000600646 NCBP3Q53F19 620 aaKnown RBP10.04□□□□□ -0.8
FKRP-220ENST00000600646 SLC4A9Q96Q91 983 aa10.04□□□□□ -0.8
FKRP-220ENST00000600646 CHMP4AQ9BY43 222 aa10.04□□□□□ -0.8
FKRP-220ENST00000600646 CICQ96RK0 1608 aaPredicted RBP10.04□□□□□ -0.8
FKRP-220ENST00000600646 KCPQ6ZWJ8 1503 aa10.03□□□□□ -0.8
FKRP-220ENST00000600646 DCAF8L1A6NGE4 600 aa10.03□□□□□ -0.8
FKRP-220ENST00000600646 ZPR1O75312 459 aa10.03□□□□□ -0.8
FKRP-220ENST00000600646 CYP19A1P11511 503 aaPredicted RBP10.03□□□□□ -0.8
FKRP-220ENST00000600646 COL5A3P25940 1745 aaPredicted RBP10.03□□□□□ -0.8
FKRP-220ENST00000600646 GNAI1P63096 354 aa10.03□□□□□ -0.8
FKRP-220ENST00000600646 COL23A1Q86Y22 540 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms