RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 NUTM1Q86Y26 1132 aa14.22□□□□□ -0.13
ARHGEF1-220ENST00000600274 ANTXR1Q9H6X2 564 aa14.22□□□□□ -0.13
ARHGEF1-220ENST00000600274 DLG5Q8TDM6 1919 aa14.22□□□□□ -0.13
ARHGEF1-220ENST00000600274 C3P01024 1663 aa14.22□□□□□ -0.13
ARHGEF1-220ENST00000600274 MAP3K5Q99683 1374 aa14.22□□□□□ -0.13
ARHGEF1-220ENST00000600274 SURF6O75683 361 aaKnown RBP14.21□□□□□ -0.13
ARHGEF1-220ENST00000600274 MON2Q7Z3U7 1717 aa14.21□□□□□ -0.13
ARHGEF1-220ENST00000600274 PIP4K2AP48426 406 aaPredicted RBP14.21□□□□□ -0.13
ARHGEF1-220ENST00000600274 CHRNA2Q15822 529 aa14.21□□□□□ -0.13
ARHGEF1-220ENST00000600274 IP6K1Q92551 441 aa14.21□□□□□ -0.13
ARHGEF1-220ENST00000600274 RGPD8O14715 1765 aaPredicted RBP14.21□□□□□ -0.14
ARHGEF1-220ENST00000600274 PI4KAP2A4QPH2 592 aa14.21□□□□□ -0.14
ARHGEF1-220ENST00000600274 PI4KAP1Q8N8J0 262 aa14.21□□□□□ -0.14
ARHGEF1-220ENST00000600274 ANKRD24Q8TF21 1146 aa14.21□□□□□ -0.14
ARHGEF1-220ENST00000600274 PRAMEF22A3QJZ6 481 aa14.2□□□□□ -0.14
ARHGEF1-220ENST00000600274 KRT28Q7Z3Y7 464 aa14.2□□□□□ -0.14
ARHGEF1-220ENST00000600274 KIAA0232Q92628 1395 aa14.2□□□□□ -0.14
ARHGEF1-220ENST00000600274 PEAK1Q9H792 1746 aa14.2□□□□□ -0.14
ARHGEF1-220ENST00000600274 MCM4P33991 863 aa14.19□□□□□ -0.14
ARHGEF1-220ENST00000600274 SLC39A6Q13433 755 aa14.19□□□□□ -0.14
ARHGEF1-220ENST00000600274 GNAI3P08754 354 aa14.19□□□□□ -0.14
ARHGEF1-220ENST00000600274 NCLP19338 710 aaKnown RBP14.19□□□□□ -0.14
ARHGEF1-220ENST00000600274 UBE2Q2Q8WVN8 375 aa14.19□□□□□ -0.14
ARHGEF1-220ENST00000600274 LRRCC1Q9C099 1032 aa14.19□□□□□ -0.14
ARHGEF1-220ENST00000600274 ANO2Q9NQ90 1003 aa14.19□□□□□ -0.14
ARHGEF1-220ENST00000600274 FOXD4L6Q3SYB3 417 aaPredicted RBP14.19□□□□□ -0.14
ARHGEF1-220ENST00000600274 FOXD4L3Q6VB84 417 aaPredicted RBP14.19□□□□□ -0.14
ARHGEF1-220ENST00000600274 SSH2Q76I76 1423 aa14.19□□□□□ -0.14
ARHGEF1-220ENST00000600274 SRGAP3O43295 1099 aa14.18□□□□□ -0.14
ARHGEF1-220ENST00000600274 HSPA2P54652 639 aa14.18□□□□□ -0.14
ARHGEF1-220ENST00000600274 PLEKHO1Q53GL0 409 aaPredicted RBP14.18□□□□□ -0.14
ARHGEF1-220ENST00000600274 MYL6BP14649 208 aa14.18□□□□□ -0.14
ARHGEF1-220ENST00000600274 SRCIN1Q9C0H9 1055 aa14.18□□□□□ -0.14
ARHGEF1-220ENST00000600274 AXIN2Q9Y2T1 843 aa14.18□□□□□ -0.14
ARHGEF1-220ENST00000600274 RBM25P49756 843 aaKnown RBP14.18□□□□□ -0.14
ARHGEF1-220ENST00000600274 PDE1AP54750 535 aa14.17□□□□□ -0.14
ARHGEF1-220ENST00000600274 JARID2Q92833 1246 aaPredicted RBP14.17□□□□□ -0.14
ARHGEF1-220ENST00000600274 C9orf78Q9NZ63 289 aaPredicted RBP14.17□□□□□ -0.14
ARHGEF1-220ENST00000600274 RGS12O14924 1447 aa14.17□□□□□ -0.14
ARHGEF1-220ENST00000600274 NBPF7P0C2Y1 421 aaPredicted RBP14.17□□□□□ -0.14
ARHGEF1-220ENST00000600274 ATF3P18847 181 aa14.17□□□□□ -0.14
ARHGEF1-220ENST00000600274 KCNH5Q8NCM2 988 aa14.17□□□□□ -0.14
ARHGEF1-220ENST00000600274 K7ELQ4 463 aaPredicted RBP14.16□□□□□ -0.14
ARHGEF1-220ENST00000600274 PPP1R42Q7Z4L9 355 aa14.16□□□□□ -0.14
ARHGEF1-220ENST00000600274 AKAP12Q02952 1782 aa14.16□□□□□ -0.14
ARHGEF1-220ENST00000600274 FER1L4A9Z1Z3 1794 aa14.16□□□□□ -0.14
ARHGEF1-220ENST00000600274 TRAK2O60296 914 aa14.16□□□□□ -0.14
ARHGEF1-220ENST00000600274 ARID3AQ99856 593 aa14.16□□□□□ -0.14
ARHGEF1-220ENST00000600274 CCDC9Q9Y3X0 531 aaKnown RBP14.16□□□□□ -0.14
ARHGEF1-220ENST00000600274 ATP10DQ9P241 1426 aa14.16□□□□□ -0.14
ARHGEF1-220ENST00000600274 USP44Q9H0E7 712 aa14.16□□□□□ -0.14
ARHGEF1-220ENST00000600274 DNAJC5Q9H3Z4 198 aa14.16□□□□□ -0.14
ARHGEF1-220ENST00000600274 KDRP35968 1356 aa14.16□□□□□ -0.14
ARHGEF1-220ENST00000600274 KIF2CQ99661 725 aa14.15□□□□□ -0.14
ARHGEF1-220ENST00000600274 KNDC1Q76NI1 1749 aa14.15□□□□□ -0.14
ARHGEF1-220ENST00000600274 MX1P20591 662 aa14.15□□□□□ -0.14
ARHGEF1-220ENST00000600274 PROSER3Q2NL68 480 aa14.15□□□□□ -0.14
ARHGEF1-220ENST00000600274 CWF19L2Q2TBE0 894 aaKnown RBP14.15□□□□□ -0.14
ARHGEF1-220ENST00000600274 RAPGEF4Q8WZA2 1011 aa14.15□□□□□ -0.14
ARHGEF1-220ENST00000600274 TNPO1Q92973 898 aaKnown RBP14.15□□□□□ -0.14
ARHGEF1-220ENST00000600274 ARHGAP23Q9P227 1491 aa14.15□□□□□ -0.14
ARHGEF1-220ENST00000600274 SSFA2P28290 1259 aa14.15□□□□□ -0.14
ARHGEF1-220ENST00000600274 DTNBO60941 627 aa14.14□□□□□ -0.15
ARHGEF1-220ENST00000600274 EIF4A1P60842 406 aaKnown RBP14.14□□□□□ -0.15
ARHGEF1-220ENST00000600274 SIL1Q9H173 461 aa14.14□□□□□ -0.15
ARHGEF1-220ENST00000600274 SLIT1O75093 1534 aa14.14□□□□□ -0.15
ARHGEF1-220ENST00000600274 NEK4P51957 841 aa14.13□□□□□ -0.15
ARHGEF1-220ENST00000600274 ZNF330Q9Y3S2 320 aaPredicted RBP14.13□□□□□ -0.15
ARHGEF1-220ENST00000600274 DNAAF4Q8WXU2 420 aa14.13□□□□□ -0.15
ARHGEF1-220ENST00000600274 UPF3BQ9BZI7 483 aaKnown RBP14.13□□□□□ -0.15
ARHGEF1-220ENST00000600274 HTATSF1O43719 755 aaKnown RBP14.13□□□□□ -0.15
ARHGEF1-220ENST00000600274 REC8O95072 547 aa14.13□□□□□ -0.15
ARHGEF1-220ENST00000600274 UNC5CLQ8IV45 518 aa14.13□□□□□ -0.15
ARHGEF1-220ENST00000600274 LARP6Q9BRS8 491 aaKnown RBP14.13□□□□□ -0.15
ARHGEF1-220ENST00000600274 PA2G4Q9UQ80 394 aaKnown RBP14.13□□□□□ -0.15
ARHGEF1-220ENST00000600274 MAP3K2Q9Y2U5 619 aa14.13□□□□□ -0.15
ARHGEF1-220ENST00000600274 ERC2O15083 957 aa14.12□□□□□ -0.15
ARHGEF1-220ENST00000600274 ATP8B2P98198 1209 aa14.12□□□□□ -0.15
ARHGEF1-220ENST00000600274 USP26Q9BXU7 913 aa14.12□□□□□ -0.15
ARHGEF1-220ENST00000600274 A0A0U1RQG5 324 aaPredicted RBP14.12□□□□□ -0.15
ARHGEF1-220ENST00000600274 CHAMP1Q96JM3 812 aa14.12□□□□□ -0.15
ARHGEF1-220ENST00000600274 A0A0G2JS52 829 aa14.11□□□□□ -0.15
ARHGEF1-220ENST00000600274 RNMTO43148 476 aaKnown RBP14.11□□□□□ -0.15
ARHGEF1-220ENST00000600274 AKAP4Q5JQC9 854 aa14.11□□□□□ -0.15
ARHGEF1-220ENST00000600274 ST18O60284 1047 aa14.11□□□□□ -0.15
ARHGEF1-220ENST00000600274 ARHGEF25Q86VW2 580 aa14.11□□□□□ -0.15
ARHGEF1-220ENST00000600274 ZGPATQ8N5A5 531 aaKnown RBP14.11□□□□□ -0.15
ARHGEF1-220ENST00000600274 DDX54Q8TDD1 881 aaKnown RBP14.11□□□□□ -0.15
ARHGEF1-220ENST00000600274 GBP4Q96PP9 640 aa14.11□□□□□ -0.15
ARHGEF1-220ENST00000600274 PIK3C2AO00443 1686 aa14.1□□□□□ -0.15
ARHGEF1-220ENST00000600274 GOLGA6L3A6NEY3 463 aa14.1□□□□□ -0.15
ARHGEF1-220ENST00000600274 RIC3Q7Z5B4 369 aa14.1□□□□□ -0.15
ARHGEF1-220ENST00000600274 NFATC2IPQ8NCF5 419 aa14.1□□□□□ -0.15
ARHGEF1-220ENST00000600274 ANKARQ7Z5J8 1434 aa14.1□□□□□ -0.15
ARHGEF1-220ENST00000600274 RABEP1Q15276 862 aa14.1□□□□□ -0.15
ARHGEF1-220ENST00000600274 PKP1Q13835 747 aa14.09□□□□□ -0.15
ARHGEF1-220ENST00000600274 MCTP1Q6DN14 999 aa14.09□□□□□ -0.15
ARHGEF1-220ENST00000600274 SNX21Q969T3 373 aa14.09□□□□□ -0.15
ARHGEF1-220ENST00000600274 VIRMAQ69YN4 1812 aaKnown RBP14.08□□□□□ -0.15
ARHGEF1-220ENST00000600274 PANK2Q9BZ23 570 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms