RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 ASAP1Q9ULH1 1129 aa28.97■■■□□ 2.23
CHMP2A-204ENST00000597848 ADAMTS7Q9UKP4 1686 aa28.96■■■□□ 2.23
CHMP2A-204ENST00000597848 TAF7Q15545 349 aaPredicted RBP28.96■■■□□ 2.23
CHMP2A-204ENST00000597848 ATG3Q9NT62 314 aa28.96■■■□□ 2.23
CHMP2A-204ENST00000597848 BTBD11A6QL63 1104 aa28.95■■■□□ 2.22
CHMP2A-204ENST00000597848 SOCS7O14512 581 aa28.95■■■□□ 2.22
CHMP2A-204ENST00000597848 EN1Q05925 392 aaPredicted RBP28.95■■■□□ 2.22
CHMP2A-204ENST00000597848 MRC1P22897 1456 aa28.94■■■□□ 2.22
CHMP2A-204ENST00000597848 PLSCR1O15162 318 aa28.94■■■□□ 2.22
CHMP2A-204ENST00000597848 SLC39A6Q13433 755 aa28.94■■■□□ 2.22
CHMP2A-204ENST00000597848 CCDC27Q2M243 656 aa28.94■■■□□ 2.22
CHMP2A-204ENST00000597848 NCBP3Q53F19 620 aaKnown RBP28.94■■■□□ 2.22
CHMP2A-204ENST00000597848 NGEFQ8N5V2 710 aa28.94■■■□□ 2.22
CHMP2A-204ENST00000597848 BTAF1O14981 1849 aa28.94■■■□□ 2.22
CHMP2A-204ENST00000597848 WWC1Q8IX03 1113 aa28.93■■■□□ 2.22
CHMP2A-204ENST00000597848 TNS1Q9HBL0 1735 aaKnown RBP28.93■■■□□ 2.22
CHMP2A-204ENST00000597848 EP400Q96L91 3159 aa28.93■■■□□ 2.22
CHMP2A-204ENST00000597848 CALD1Q05682 793 aaKnown RBP28.92■■■□□ 2.22
CHMP2A-204ENST00000597848 MIS18AQ9NYP9 233 aa28.92■■■□□ 2.22
CHMP2A-204ENST00000597848 LAS1LQ9Y4W2 734 aaKnown RBP28.92■■■□□ 2.22
CHMP2A-204ENST00000597848 VIRMAQ69YN4 1812 aaKnown RBP28.92■■■□□ 2.22
CHMP2A-204ENST00000597848 PALLDQ8WX93 1383 aa28.91■■■□□ 2.22
CHMP2A-204ENST00000597848 TTC5Q8N0Z6 440 aa28.91■■■□□ 2.22
CHMP2A-204ENST00000597848 EZH2Q15910 746 aaKnown RBP28.9■■■□□ 2.22
CHMP2A-204ENST00000597848 CAMKK2Q96RR4 588 aa28.9■■■□□ 2.22
CHMP2A-204ENST00000597848 RBM42Q9BTD8 480 aaKnown RBP28.9■■■□□ 2.22
CHMP2A-204ENST00000597848 PTCD1O75127 700 aaKnown RBP28.89■■■□□ 2.22
CHMP2A-204ENST00000597848 TXNRD1Q16881 649 aa28.87■■■□□ 2.21
CHMP2A-204ENST00000597848 ZNF790Q6PG37 636 aa28.87■■■□□ 2.21
CHMP2A-204ENST00000597848 KCNQ3O43525 872 aa28.86■■■□□ 2.21
CHMP2A-204ENST00000597848 HNRNPUQ00839 825 aaKnown RBP eCLIP28.86■■■□□ 2.21
CHMP2A-204ENST00000597848 TSPYL4Q9UJ04 414 aa28.86■■■□□ 2.21
CHMP2A-204ENST00000597848 CCNL1Q9UK58 526 aaPredicted RBP28.86■■■□□ 2.21
CHMP2A-204ENST00000597848 LOC102724428A0A0B4J2F2 783 aa28.85■■■□□ 2.21
CHMP2A-204ENST00000597848 SIK1P57059 783 aa28.85■■■□□ 2.21
CHMP2A-204ENST00000597848 KCNQ4P56696 695 aa28.84■■■□□ 2.21
CHMP2A-204ENST00000597848 WDR63Q8IWG1 891 aa28.84■■■□□ 2.21
CHMP2A-204ENST00000597848 PROM2Q8N271 834 aa28.84■■■□□ 2.21
CHMP2A-204ENST00000597848 CFAP44Q96MT7 982 aa28.84■■■□□ 2.21
CHMP2A-204ENST00000597848 CHL1O00533 1208 aa28.83■■■□□ 2.21
CHMP2A-204ENST00000597848 GNAI1P63096 354 aa28.83■■■□□ 2.21
CHMP2A-204ENST00000597848 BABAM1Q9NWV8 329 aa28.83■■■□□ 2.21
CHMP2A-204ENST00000597848 SIPA1L3O60292 1781 aaPredicted RBP28.83■■■□□ 2.21
CHMP2A-204ENST00000597848 ATP6V1AP38606 617 aa28.82■■■□□ 2.2
CHMP2A-204ENST00000597848 SLC27A3Q5K4L6 730 aa28.82■■■□□ 2.2
CHMP2A-204ENST00000597848 IFT57Q9NWB7 429 aa28.82■■■□□ 2.2
CHMP2A-204ENST00000597848 ZNF496Q96IT1 587 aaPredicted RBP28.81■■■□□ 2.2
CHMP2A-204ENST00000597848 FMNL2Q96PY5 1086 aa28.81■■■□□ 2.2
CHMP2A-204ENST00000597848 IL16Q14005 1332 aa28.79■■■□□ 2.2
CHMP2A-204ENST00000597848 LRRC4BQ9NT99 713 aa28.79■■■□□ 2.2
CHMP2A-204ENST00000597848 ZNF853P0CG23 659 aa28.78■■■□□ 2.2
CHMP2A-204ENST00000597848 SLC4A9Q96Q91 983 aa28.78■■■□□ 2.2
CHMP2A-204ENST00000597848 MBIPQ9NS73 344 aa28.78■■■□□ 2.2
CHMP2A-204ENST00000597848 ZNF521Q96K83 1311 aa28.76■■■□□ 2.19
CHMP2A-204ENST00000597848 EIF4A1P60842 406 aaKnown RBP28.76■■■□□ 2.19
CHMP2A-204ENST00000597848 PAPPAQ13219 1627 aa28.76■■■□□ 2.19
CHMP2A-204ENST00000597848 ITPK1Q13572 414 aa28.75■■■□□ 2.19
CHMP2A-204ENST00000597848 VSIG10Q8N0Z9 540 aa28.75■■■□□ 2.19
CHMP2A-204ENST00000597848 HEG1Q9ULI3 1381 aa28.75■■■□□ 2.19
CHMP2A-204ENST00000597848 LY75O60449 1722 aa28.74■■■□□ 2.19
CHMP2A-204ENST00000597848 KCPQ6ZWJ8 1503 aa28.74■■■□□ 2.19
CHMP2A-204ENST00000597848 HMGB2P26583 209 aaKnown RBP28.74■■■□□ 2.19
CHMP2A-204ENST00000597848 GOLGA2Q08379 1002 aa28.74■■■□□ 2.19
CHMP2A-204ENST00000597848 RGPD3A6NKT7 1758 aaPredicted RBP28.74■■■□□ 2.19
CHMP2A-204ENST00000597848 RGPD4Q7Z3J3 1758 aa28.74■■■□□ 2.19
CHMP2A-204ENST00000597848 DNAJC10Q8IXB1 793 aa28.73■■■□□ 2.19
CHMP2A-204ENST00000597848 TSR2Q969E8 191 aaKnown RBP28.73■■■□□ 2.19
CHMP2A-204ENST00000597848 SNRPA1P09661 255 aaKnown RBP28.72■■■□□ 2.19
CHMP2A-204ENST00000597848 LINC00116Q8NCU8 138 aa28.71■■■□□ 2.19
CHMP2A-204ENST00000597848 TEX13AQ9BXU3 409 aaPredicted RBP28.71■■■□□ 2.19
CHMP2A-204ENST00000597848 MYH16Q9H6N6 1097 aa28.71■■■□□ 2.19
CHMP2A-204ENST00000597848 SPINK5Q9NQ38 1064 aaPredicted RBP28.71■■■□□ 2.19
CHMP2A-204ENST00000597848 NBPF14Q5TI25 921 aa28.7■■■□□ 2.18
CHMP2A-204ENST00000597848 KDM3BQ7LBC6 1761 aa28.7■■■□□ 2.18
CHMP2A-204ENST00000597848 UBR2Q8IWV8 1755 aa28.68■■■□□ 2.18
CHMP2A-204ENST00000597848 PRAMEF22A3QJZ6 481 aa28.68■■■□□ 2.18
CHMP2A-204ENST00000597848 GIGYF1O75420 1035 aaPredicted RBP28.68■■■□□ 2.18
CHMP2A-204ENST00000597848 E9PSI1 815 aa28.67■■■□□ 2.18
CHMP2A-204ENST00000597848 STARD3NLO95772 234 aa28.67■■■□□ 2.18
CHMP2A-204ENST00000597848 KRT24Q2M2I5 525 aa28.67■■■□□ 2.18
CHMP2A-204ENST00000597848 CDCA7LQ96GN5 454 aa28.67■■■□□ 2.18
CHMP2A-204ENST00000597848 YTHDC1Q96MU7 727 aaKnown RBP28.67■■■□□ 2.18
CHMP2A-204ENST00000597848 STK32BQ9NY57 414 aa28.67■■■□□ 2.18
CHMP2A-204ENST00000597848 FANCIQ9NVI1 1328 aa28.67■■■□□ 2.18
CHMP2A-204ENST00000597848 USP16Q9Y5T5 823 aa28.66■■■□□ 2.18
CHMP2A-204ENST00000597848 RREB1Q92766 1687 aa28.66■■■□□ 2.18
CHMP2A-204ENST00000597848 CYP19A1P11511 503 aaPredicted RBP28.65■■■□□ 2.18
CHMP2A-204ENST00000597848 AK7Q96M32 723 aa28.65■■■□□ 2.18
CHMP2A-204ENST00000597848 ZBED9Q6R2W3 1325 aa28.65■■■□□ 2.18
CHMP2A-204ENST00000597848 ELL2O00472 640 aaPredicted RBP28.64■■■□□ 2.18
CHMP2A-204ENST00000597848 CRKLP46109 303 aaKnown RBP28.64■■■□□ 2.18
CHMP2A-204ENST00000597848 SLFN5Q08AF3 891 aa28.64■■■□□ 2.18
CHMP2A-204ENST00000597848 ZNF827Q17R98 1081 aa28.63■■■□□ 2.17
CHMP2A-204ENST00000597848 DUSP27Q5VZP5 1158 aa28.63■■■□□ 2.17
CHMP2A-204ENST00000597848 ANO8Q9HCE9 1232 aaPredicted RBP28.63■■■□□ 2.17
CHMP2A-204ENST00000597848 ZNF831Q5JPB2 1677 aa28.62■■■□□ 2.17
CHMP2A-204ENST00000597848 SLC15A2Q16348 729 aa28.62■■■□□ 2.17
CHMP2A-204ENST00000597848 C8orf58Q8NAV2 365 aa28.62■■■□□ 2.17
CHMP2A-204ENST00000597848 AKT1S1Q96B36 256 aa28.62■■■□□ 2.17
CHMP2A-204ENST00000597848 TFCP2L1Q9NZI6 479 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms