RNA–Protein interactions for RNA: ENST00000597716.1

CAPN12-207, Transcript of calpain 12, humanhuman

TSL 2

Gene CAPN12, Length 2,198 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-207ENST00000597716 C22orf23Q9BZE7 217 aa24.43■■□□□ 1.5
CAPN12-207ENST00000597716 RGPD5Q99666 1765 aa24.42■■□□□ 1.5
CAPN12-207ENST00000597716 ZBTB7CA1YPR0 619 aa24.42■■□□□ 1.5
CAPN12-207ENST00000597716 HMMRO75330 724 aa24.41■■□□□ 1.5
CAPN12-207ENST00000597716 ZNF530Q6P9A1 599 aaPredicted RBP24.41■■□□□ 1.5
CAPN12-207ENST00000597716 PXDNQ92626 1479 aa24.41■■□□□ 1.5
CAPN12-207ENST00000597716 SIPA1L3O60292 1781 aaPredicted RBP24.41■■□□□ 1.5
CAPN12-207ENST00000597716 MFAP1P55081 439 aaKnown RBP24.4■■□□□ 1.5
CAPN12-207ENST00000597716 PLEKHG2Q9H7P9 1386 aa24.4■■□□□ 1.5
CAPN12-207ENST00000597716 CRYBG1Q9Y4K1 1723 aa24.4■■□□□ 1.5
CAPN12-207ENST00000597716 F6X3S4 739 aa24.4■■□□□ 1.5
CAPN12-207ENST00000597716 LMOD2Q6P5Q4 547 aa24.4■■□□□ 1.5
CAPN12-207ENST00000597716 EIF4A1P60842 406 aaKnown RBP24.39■■□□□ 1.5
CAPN12-207ENST00000597716 FKBP5Q13451 457 aaPredicted RBP24.39■■□□□ 1.5
CAPN12-207ENST00000597716 HDGFL1Q5TGJ6 251 aa24.39■■□□□ 1.49
CAPN12-207ENST00000597716 SLC4A10Q6U841 1118 aa24.39■■□□□ 1.49
CAPN12-207ENST00000597716 COL18A1P39060 1754 aa24.38■■□□□ 1.49
CAPN12-207ENST00000597716 HSPA2P54652 639 aa24.38■■□□□ 1.49
CAPN12-207ENST00000597716 CADPS2Q86UW7 1296 aa24.38■■□□□ 1.49
CAPN12-207ENST00000597716 LGR6Q9HBX8 967 aa24.38■■□□□ 1.49
CAPN12-207ENST00000597716 ERBB3P21860 1342 aa24.38■■□□□ 1.49
CAPN12-207ENST00000597716 EIF5BO60841 1220 aaKnown RBP24.37■■□□□ 1.49
CAPN12-207ENST00000597716 GNAI3P08754 354 aa24.37■■□□□ 1.49
CAPN12-207ENST00000597716 RBM25P49756 843 aaKnown RBP24.37■■□□□ 1.49
CAPN12-207ENST00000597716 GNAI2P04899 355 aa24.37■■□□□ 1.49
CAPN12-207ENST00000597716 C1orf141Q5JVX7 400 aa24.37■■□□□ 1.49
CAPN12-207ENST00000597716 PLEKHM2Q8IWE5 1019 aa24.37■■□□□ 1.49
CAPN12-207ENST00000597716 TNS3Q68CZ2 1445 aa24.36■■□□□ 1.49
CAPN12-207ENST00000597716 NPHP3Q7Z494 1330 aa24.36■■□□□ 1.49
CAPN12-207ENST00000597716 TEFQ10587 303 aa24.36■■□□□ 1.49
CAPN12-207ENST00000597716 AXIN2Q9Y2T1 843 aa24.36■■□□□ 1.49
CAPN12-207ENST00000597716 RNMTO43148 476 aaKnown RBP24.35■■□□□ 1.49
CAPN12-207ENST00000597716 XIRP1Q702N8 1843 aaKnown RBP24.35■■□□□ 1.49
CAPN12-207ENST00000597716 STRCQ7RTU9 1775 aa24.35■■□□□ 1.49
CAPN12-207ENST00000597716 TBC1D2Q9BYX2 928 aa24.33■■□□□ 1.48
CAPN12-207ENST00000597716 BTBD11A6QL63 1104 aa24.32■■□□□ 1.48
CAPN12-207ENST00000597716 TTC22Q5TAA0 569 aa24.32■■□□□ 1.48
CAPN12-207ENST00000597716 CDC45O75419 566 aa24.32■■□□□ 1.48
CAPN12-207ENST00000597716 HEG1Q9ULI3 1381 aa24.31■■□□□ 1.48
CAPN12-207ENST00000597716 GSPT1P15170 499 aaKnown RBP24.31■■□□□ 1.48
CAPN12-207ENST00000597716 TBC1D9Q6ZT07 1266 aa24.31■■□□□ 1.48
CAPN12-207ENST00000597716 NECTIN2Q92692 538 aa24.31■■□□□ 1.48
CAPN12-207ENST00000597716 NFKBIBQ15653 356 aa24.3■■□□□ 1.48
CAPN12-207ENST00000597716 MPRIPQ6WCQ1 1025 aa24.3■■□□□ 1.48
CAPN12-207ENST00000597716 SCN11AQ9UI33 1791 aa24.3■■□□□ 1.48
CAPN12-207ENST00000597716 ZC3H6P61129 1189 aaKnown RBP24.27■■□□□ 1.48
CAPN12-207ENST00000597716 ATP8B2P98198 1209 aa24.27■■□□□ 1.48
CAPN12-207ENST00000597716 CPDO75976 1380 aa24.27■■□□□ 1.48
CAPN12-207ENST00000597716 OSBPL3Q9H4L5 887 aa24.27■■□□□ 1.48
CAPN12-207ENST00000597716 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.27■■□□□ 1.486e-7■■□□□ 12.6
CAPN12-207ENST00000597716 PHAXQ9H814 394 aaKnown RBP24.26■■□□□ 1.47
CAPN12-207ENST00000597716 SPATA31A3Q5VYP0 1347 aa24.26■■□□□ 1.47
CAPN12-207ENST00000597716 KCNQ3O43525 872 aa24.26■■□□□ 1.47
CAPN12-207ENST00000597716 ANTXR1Q9H6X2 564 aa24.26■■□□□ 1.47
CAPN12-207ENST00000597716 PKD1L3Q7Z443 1732 aa24.26■■□□□ 1.47
CAPN12-207ENST00000597716 USP44Q9H0E7 712 aa24.25■■□□□ 1.47
CAPN12-207ENST00000597716 CHPF2Q9P2E5 772 aa24.25■■□□□ 1.47
CAPN12-207ENST00000597716 PLEKHG5O94827 1062 aa24.25■■□□□ 1.47
CAPN12-207ENST00000597716 C16orf71Q8IYS4 520 aaPredicted RBP24.25■■□□□ 1.47
CAPN12-207ENST00000597716 RAPGEF4Q8WZA2 1011 aa24.25■■□□□ 1.47
CAPN12-207ENST00000597716 EIF2S2P20042 333 aaKnown RBP24.24■■□□□ 1.47
CAPN12-207ENST00000597716 DEKP35659 375 aaKnown RBP24.24■■□□□ 1.47
CAPN12-207ENST00000597716 SNX21Q969T3 373 aa24.24■■□□□ 1.47
CAPN12-207ENST00000597716 SRCIN1Q9C0H9 1055 aa24.24■■□□□ 1.47
CAPN12-207ENST00000597716 DBF4Q9UBU7 674 aaPredicted RBP24.23■■□□□ 1.47
CAPN12-207ENST00000597716 TUBGCP6Q96RT7 1819 aa24.23■■□□□ 1.47
CAPN12-207ENST00000597716 IBTKQ9P2D0 1353 aaPredicted RBP24.23■■□□□ 1.47
CAPN12-207ENST00000597716 UBTFL1P0CB47 393 aaPredicted RBP24.23■■□□□ 1.47
CAPN12-207ENST00000597716 MRC1P22897 1456 aa24.23■■□□□ 1.47
CAPN12-207ENST00000597716 GIGYF1O75420 1035 aaPredicted RBP24.22■■□□□ 1.47
CAPN12-207ENST00000597716 DDX17Q92841 729 aaKnown RBP24.22■■□□□ 1.47
CAPN12-207ENST00000597716 MEGF6O75095 1541 aa24.22■■□□□ 1.47
CAPN12-207ENST00000597716 SMARCA5O60264 1052 aaPredicted RBP24.22■■□□□ 1.47
CAPN12-207ENST00000597716 OTUD7AQ8TE49 926 aaPredicted RBP24.22■■□□□ 1.47
CAPN12-207ENST00000597716 DNAAF4Q8WXU2 420 aa24.22■■□□□ 1.47
CAPN12-207ENST00000597716 LRRFIP2Q9Y608 721 aaKnown RBP24.22■■□□□ 1.47
CAPN12-207ENST00000597716 TATP17735 454 aaPredicted RBP24.21■■□□□ 1.47
CAPN12-207ENST00000597716 KDM6AO15550 1401 aaPredicted RBP24.21■■□□□ 1.47
CAPN12-207ENST00000597716 SALL3Q9BXA9 1300 aa24.2■■□□□ 1.47
CAPN12-207ENST00000597716 HSCBQ8IWL3 235 aa24.2■■□□□ 1.47
CAPN12-207ENST00000597716 SPG7Q9UQ90 795 aa24.2■■□□□ 1.47
CAPN12-207ENST00000597716 PNMA6EA0A0J9YXQ4 647 aa24.2■■□□□ 1.46
CAPN12-207ENST00000597716 BEND3Q5T5X7 828 aa24.2■■□□□ 1.46
CAPN12-207ENST00000597716 LRRCC1Q9C099 1032 aa24.2■■□□□ 1.46
CAPN12-207ENST00000597716 NLRP2Q9NX02 1062 aa24.2■■□□□ 1.46
CAPN12-207ENST00000597716 PARP4Q9UKK3 1724 aaKnown RBP24.19■■□□□ 1.46
CAPN12-207ENST00000597716 ADCY9O60503 1353 aa24.19■■□□□ 1.46
CAPN12-207ENST00000597716 SSH3Q8TE77 659 aa24.19■■□□□ 1.46
CAPN12-207ENST00000597716 KIF2CQ99661 725 aa24.18■■□□□ 1.46
CAPN12-207ENST00000597716 PHKG2P15735 406 aa24.18■■□□□ 1.46
CAPN12-207ENST00000597716 SDSP20132 328 aa24.18■■□□□ 1.46
CAPN12-207ENST00000597716 PDE1AP54750 535 aa24.18■■□□□ 1.46
CAPN12-207ENST00000597716 CASC1Q6TDU7 716 aa24.18■■□□□ 1.46
CAPN12-207ENST00000597716 EXOC6BQ9Y2D4 811 aa24.18■■□□□ 1.46
CAPN12-207ENST00000597716 PI4KAP2A4QPH2 592 aa24.17■■□□□ 1.46
CAPN12-207ENST00000597716 APBB1O00213 710 aa24.17■■□□□ 1.46
CAPN12-207ENST00000597716 PI4KAP1Q8N8J0 262 aa24.17■■□□□ 1.46
CAPN12-207ENST00000597716 SLKQ9H2G2 1235 aaPredicted RBP24.17■■□□□ 1.46
CAPN12-207ENST00000597716 POLA2Q14181 598 aa24.16■■□□□ 1.46
CAPN12-207ENST00000597716 BRINP3Q76B58 766 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms