RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 SLC39A6Q13433 755 aa20.39■□□□□ 0.85
SMCO4-206ENST00000596676 TEFQ10587 303 aa20.38■□□□□ 0.85
SMCO4-206ENST00000596676 DEFB132Q7Z7B7 95 aa20.38■□□□□ 0.85
SMCO4-206ENST00000596676 MRC1P22897 1456 aa20.37■□□□□ 0.85
SMCO4-206ENST00000596676 KCNQ3O43525 872 aa20.37■□□□□ 0.85
SMCO4-206ENST00000596676 ATG3Q9NT62 314 aa20.37■□□□□ 0.85
SMCO4-206ENST00000596676 SIPA1L3O60292 1781 aaPredicted RBP20.36■□□□□ 0.85
SMCO4-206ENST00000596676 WWC1Q8IX03 1113 aa20.36■□□□□ 0.85
SMCO4-206ENST00000596676 KCNQ4P56696 695 aa20.35■□□□□ 0.85
SMCO4-206ENST00000596676 EN1Q05925 392 aaPredicted RBP20.35■□□□□ 0.85
SMCO4-206ENST00000596676 LMOD3Q0VAK6 560 aa20.35■□□□□ 0.85
SMCO4-206ENST00000596676 LAS1LQ9Y4W2 734 aaKnown RBP20.34■□□□□ 0.85
SMCO4-206ENST00000596676 TAF7Q15545 349 aaPredicted RBP20.33■□□□□ 0.85
SMCO4-206ENST00000596676 BTBD11A6QL63 1104 aa20.32■□□□□ 0.84
SMCO4-206ENST00000596676 HNRNPUQ00839 825 aaKnown RBP eCLIP20.32■□□□□ 0.84
SMCO4-206ENST00000596676 EZH2Q15910 746 aaKnown RBP20.32■□□□□ 0.84
SMCO4-206ENST00000596676 CCDC27Q2M243 656 aa20.32■□□□□ 0.84
SMCO4-206ENST00000596676 PROM2Q8N271 834 aa20.32■□□□□ 0.84
SMCO4-206ENST00000596676 PTCD1O75127 700 aaKnown RBP20.31■□□□□ 0.84
SMCO4-206ENST00000596676 SF3B2Q13435 895 aaKnown RBP20.31■□□□□ 0.84
SMCO4-206ENST00000596676 SPINK5Q9NQ38 1064 aaPredicted RBP20.31■□□□□ 0.84
SMCO4-206ENST00000596676 SLC4A9Q96Q91 983 aa20.3■□□□□ 0.84
SMCO4-206ENST00000596676 CAMKK2Q96RR4 588 aa20.3■□□□□ 0.84
SMCO4-206ENST00000596676 RBM42Q9BTD8 480 aaKnown RBP20.3■□□□□ 0.84
SMCO4-206ENST00000596676 PALLDQ8WX93 1383 aa20.3■□□□□ 0.84
SMCO4-206ENST00000596676 ZNF521Q96K83 1311 aa20.29■□□□□ 0.84
SMCO4-206ENST00000596676 PAPPAQ13219 1627 aa20.29■□□□□ 0.84
SMCO4-206ENST00000596676 CCDC125Q86Z20 511 aa20.29■□□□□ 0.84
SMCO4-206ENST00000596676 PLSCR1O15162 318 aa20.28■□□□□ 0.84
SMCO4-206ENST00000596676 ZNF790Q6PG37 636 aa20.28■□□□□ 0.84
SMCO4-206ENST00000596676 LRRC4BQ9NT99 713 aa20.28■□□□□ 0.84
SMCO4-206ENST00000596676 CHL1O00533 1208 aa20.27■□□□□ 0.84
SMCO4-206ENST00000596676 ZNF853P0CG23 659 aa20.27■□□□□ 0.84
SMCO4-206ENST00000596676 BAG6P46379 1132 aa20.27■□□□□ 0.84
SMCO4-206ENST00000596676 NCBP3Q53F19 620 aaKnown RBP20.27■□□□□ 0.84
SMCO4-206ENST00000596676 ZNF496Q96IT1 587 aaPredicted RBP20.27■□□□□ 0.84
SMCO4-206ENST00000596676 TSPYL4Q9UJ04 414 aa20.27■□□□□ 0.84
SMCO4-206ENST00000596676 TXNRD1Q16881 649 aa20.26■□□□□ 0.83
SMCO4-206ENST00000596676 KRT24Q2M2I5 525 aa20.26■□□□□ 0.83
SMCO4-206ENST00000596676 SMARCC1Q92922 1105 aaPredicted RBP20.26■□□□□ 0.83
SMCO4-206ENST00000596676 TSR2Q969E8 191 aaKnown RBP20.26■□□□□ 0.83
SMCO4-206ENST00000596676 CDCA7LQ96GN5 454 aa20.26■□□□□ 0.83
SMCO4-206ENST00000596676 YTHDC1Q96MU7 727 aaKnown RBP20.26■□□□□ 0.83
SMCO4-206ENST00000596676 MBIPQ9NS73 344 aa20.26■□□□□ 0.83
SMCO4-206ENST00000596676 KCPQ6ZWJ8 1503 aa20.26■□□□□ 0.83
SMCO4-206ENST00000596676 LOC102724428A0A0B4J2F2 783 aa20.25■□□□□ 0.83
SMCO4-206ENST00000596676 PRAMEF22A3QJZ6 481 aa20.25■□□□□ 0.83
SMCO4-206ENST00000596676 SIK1P57059 783 aa20.25■□□□□ 0.83
SMCO4-206ENST00000596676 ITPK1Q13572 414 aa20.25■□□□□ 0.83
SMCO4-206ENST00000596676 WDR63Q8IWG1 891 aa20.25■□□□□ 0.83
SMCO4-206ENST00000596676 KDM3BQ7LBC6 1761 aa20.25■□□□□ 0.83
SMCO4-206ENST00000596676 LY75O60449 1722 aa20.24■□□□□ 0.83
SMCO4-206ENST00000596676 SOCS7O14512 581 aa20.24■□□□□ 0.83
SMCO4-206ENST00000596676 TTC5Q8N0Z6 440 aa20.24■□□□□ 0.83
SMCO4-206ENST00000596676 CFAP44Q96MT7 982 aa20.24■□□□□ 0.83
SMCO4-206ENST00000596676 CCNL1Q9UK58 526 aaPredicted RBP20.24■□□□□ 0.83
SMCO4-206ENST00000596676 UBR2Q8IWV8 1755 aa20.23■□□□□ 0.83
SMCO4-206ENST00000596676 NGEFQ8N5V2 710 aa20.23■□□□□ 0.83
SMCO4-206ENST00000596676 IFT57Q9NWB7 429 aa20.23■□□□□ 0.83
SMCO4-206ENST00000596676 ATP6V1AP38606 617 aa20.22■□□□□ 0.83
SMCO4-206ENST00000596676 EIF4A1P60842 406 aaKnown RBP20.22■□□□□ 0.83
SMCO4-206ENST00000596676 GNAI1P63096 354 aa20.22■□□□□ 0.83
SMCO4-206ENST00000596676 CALD1Q05682 793 aaKnown RBP20.21■□□□□ 0.83
SMCO4-206ENST00000596676 DNAJC10Q8IXB1 793 aa20.21■□□□□ 0.83
SMCO4-206ENST00000596676 IL16Q14005 1332 aa20.21■□□□□ 0.83
SMCO4-206ENST00000596676 SMIM5Q71RC9 77 aa20.2■□□□□ 0.82
SMCO4-206ENST00000596676 LINC00116Q8NCU8 138 aa20.2■□□□□ 0.82
SMCO4-206ENST00000596676 FMNL2Q96PY5 1086 aa20.2■□□□□ 0.82
SMCO4-206ENST00000596676 HEG1Q9ULI3 1381 aa20.2■□□□□ 0.82
SMCO4-206ENST00000596676 GOLGA2Q08379 1002 aa20.19■□□□□ 0.82
SMCO4-206ENST00000596676 TJP1Q07157 1748 aa20.19■□□□□ 0.82
SMCO4-206ENST00000596676 RGPD3A6NKT7 1758 aaPredicted RBP20.18■□□□□ 0.82
SMCO4-206ENST00000596676 RGPD4Q7Z3J3 1758 aa20.18■□□□□ 0.82
SMCO4-206ENST00000596676 ELL2O00472 640 aaPredicted RBP20.18■□□□□ 0.82
SMCO4-206ENST00000596676 SLFN5Q08AF3 891 aa20.18■□□□□ 0.82
SMCO4-206ENST00000596676 BABAM1Q9NWV8 329 aa20.18■□□□□ 0.82
SMCO4-206ENST00000596676 USP16Q9Y5T5 823 aa20.18■□□□□ 0.82
SMCO4-206ENST00000596676 RREB1Q92766 1687 aa20.18■□□□□ 0.82
SMCO4-206ENST00000596676 FANCIQ9NVI1 1328 aa20.18■□□□□ 0.82
SMCO4-206ENST00000596676 C5P01031 1676 aa20.17■□□□□ 0.82
SMCO4-206ENST00000596676 NUP188Q5SRE5 1749 aa20.17■□□□□ 0.82
SMCO4-206ENST00000596676 SLC27A3Q5K4L6 730 aa20.17■□□□□ 0.82
SMCO4-206ENST00000596676 TSPYL6Q8N831 410 aa20.17■□□□□ 0.82
SMCO4-206ENST00000596676 C8orf58Q8NAV2 365 aa20.17■□□□□ 0.82
SMCO4-206ENST00000596676 ANO8Q9HCE9 1232 aaPredicted RBP20.17■□□□□ 0.82
SMCO4-206ENST00000596676 TAF1LQ8IZX4 1826 aa20.16■□□□□ 0.82
SMCO4-206ENST00000596676 GIGYF1O75420 1035 aaPredicted RBP20.16■□□□□ 0.82
SMCO4-206ENST00000596676 PIP4K2AP48426 406 aaPredicted RBP20.15■□□□□ 0.82
SMCO4-206ENST00000596676 ZNF827Q17R98 1081 aa20.15■□□□□ 0.82
SMCO4-206ENST00000596676 ZBED9Q6R2W3 1325 aa20.15■□□□□ 0.82
SMCO4-206ENST00000596676 SNRPA1P09661 255 aaKnown RBP20.14■□□□□ 0.81
SMCO4-206ENST00000596676 CYP19A1P11511 503 aaPredicted RBP20.14■□□□□ 0.81
SMCO4-206ENST00000596676 EXOSC9Q06265 439 aaKnown RBP20.14■□□□□ 0.81
SMCO4-206ENST00000596676 AMIGO3Q86WK7 504 aa20.14■□□□□ 0.81
SMCO4-206ENST00000596676 NECTIN2Q92692 538 aa20.14■□□□□ 0.81
SMCO4-206ENST00000596676 DUSP27Q5VZP5 1158 aa20.13■□□□□ 0.81
SMCO4-206ENST00000596676 TRMT2AQ8IZ69 625 aaKnown RBP20.13■□□□□ 0.81
SMCO4-206ENST00000596676 VSIG10Q8N0Z9 540 aa20.13■□□□□ 0.81
SMCO4-206ENST00000596676 MYH14Q7Z406 1995 aaKnown RBP20.13■□□□□ 0.81
SMCO4-206ENST00000596676 E9PSI1 815 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms