RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 MX1P20591 662 aa21.12■□□□□ 0.97
ARHGEF1-213ENST00000595897 HSP90AB2PQ58FF8 381 aa21.12■□□□□ 0.97
ARHGEF1-213ENST00000595897 TSPY26PQ9H489 355 aa21.12■□□□□ 0.97
ARHGEF1-213ENST00000595897 UPF3BQ9BZI7 483 aaKnown RBP21.12■□□□□ 0.97
ARHGEF1-213ENST00000595897 OSCARQ8IYS5 282 aa21.11■□□□□ 0.97
ARHGEF1-213ENST00000595897 STK31Q9BXU1 1019 aa21.11■□□□□ 0.97
ARHGEF1-213ENST00000595897 CUL4AQ13619 759 aa21.1■□□□□ 0.97
ARHGEF1-213ENST00000595897 GDPD2Q9HCC8 539 aa21.1■□□□□ 0.97
ARHGEF1-213ENST00000595897 INTS4Q96HW7 963 aaKnown RBP21.09■□□□□ 0.97
ARHGEF1-213ENST00000595897 METP08581 1390 aa21.09■□□□□ 0.97
ARHGEF1-213ENST00000595897 NUTM2FA1L443 756 aa21.09■□□□□ 0.97
ARHGEF1-213ENST00000595897 FOXO3O43524 673 aa21.09■□□□□ 0.97
ARHGEF1-213ENST00000595897 CHMLP26374 656 aa21.09■□□□□ 0.97
ARHGEF1-213ENST00000595897 ANAPC15P60006 121 aa21.09■□□□□ 0.97
ARHGEF1-213ENST00000595897 A2ML1A8K2U0 1454 aa21.08■□□□□ 0.97
ARHGEF1-213ENST00000595897 FKBP5Q13451 457 aaPredicted RBP21.08■□□□□ 0.97
ARHGEF1-213ENST00000595897 PHF14O94880 888 aa21.08■□□□□ 0.96
ARHGEF1-213ENST00000595897 MLECQ14165 292 aa21.08■□□□□ 0.96
ARHGEF1-213ENST00000595897 TPRNQ4KMQ1 711 aa21.08■□□□□ 0.96
ARHGEF1-213ENST00000595897 PNMA6EA0A0J9YXQ4 647 aa21.06■□□□□ 0.96
ARHGEF1-213ENST00000595897 ZBTB7CA1YPR0 619 aa21.06■□□□□ 0.96
ARHGEF1-213ENST00000595897 GNAI3P08754 354 aa21.06■□□□□ 0.96
ARHGEF1-213ENST00000595897 MAP7D2Q96T17 732 aa21.06■□□□□ 0.96
ARHGEF1-213ENST00000595897 NECTIN2Q92692 538 aa21.06■□□□□ 0.96
ARHGEF1-213ENST00000595897 TTC21BQ7Z4L5 1316 aa21.06■□□□□ 0.96
ARHGEF1-213ENST00000595897 DNTTIP2Q5QJE6 756 aaKnown RBP21.05■□□□□ 0.96
ARHGEF1-213ENST00000595897 PRR36Q9H6K5 1346 aa21.05■□□□□ 0.96
ARHGEF1-213ENST00000595897 CRB1P82279 1406 aa21.05■□□□□ 0.96
ARHGEF1-213ENST00000595897 GADD45BO75293 160 aaPredicted RBP21.05■□□□□ 0.96
ARHGEF1-213ENST00000595897 RICTORQ6R327 1708 aa21.05■□□□□ 0.96
ARHGEF1-213ENST00000595897 MTHFSDQ2M296 383 aaKnown RBP21.04■□□□□ 0.96
ARHGEF1-213ENST00000595897 SALL3Q9BXA9 1300 aa21.04■□□□□ 0.96
ARHGEF1-213ENST00000595897 WDR33Q9C0J8 1336 aaKnown RBP21.04■□□□□ 0.96
ARHGEF1-213ENST00000595897 KIAA2012Q0VF49 1180 aa21.04■□□□□ 0.96
ARHGEF1-213ENST00000595897 USP48Q86UV5 1035 aa21.04■□□□□ 0.96
ARHGEF1-213ENST00000595897 ARID3AQ99856 593 aa21.04■□□□□ 0.96
ARHGEF1-213ENST00000595897 FLIIQ13045 1269 aa21.03■□□□□ 0.96
ARHGEF1-213ENST00000595897 MPNDQ8N594 471 aa21.03■□□□□ 0.96
ARHGEF1-213ENST00000595897 SASS6Q6UVJ0 657 aa21.03■□□□□ 0.96
ARHGEF1-213ENST00000595897 UNC5CLQ8IV45 518 aa21.03■□□□□ 0.96
ARHGEF1-213ENST00000595897 SRCIN1Q9C0H9 1055 aa21.03■□□□□ 0.96
ARHGEF1-213ENST00000595897 ATP8B2P98198 1209 aa21.03■□□□□ 0.96
ARHGEF1-213ENST00000595897 IL1RAPL2Q9NP60 686 aa21.02■□□□□ 0.96
ARHGEF1-213ENST00000595897 ACEP12821 1306 aa21.02■□□□□ 0.96
ARHGEF1-213ENST00000595897 DYNC1I1O14576 645 aa21.02■□□□□ 0.96
ARHGEF1-213ENST00000595897 LRRFIP2Q9Y608 721 aaKnown RBP21.02■□□□□ 0.96
ARHGEF1-213ENST00000595897 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.02■□□□□ 0.96
ARHGEF1-213ENST00000595897 MAP3K19Q56UN5 1328 aa21.02■□□□□ 0.95
ARHGEF1-213ENST00000595897 CCDC30Q5VVM6 783 aa21■□□□□ 0.95
ARHGEF1-213ENST00000595897 RIMBP3CA6NJZ7 1639 aa21■□□□□ 0.95
ARHGEF1-213ENST00000595897 RIMBP3BA6NNM3 1639 aa21■□□□□ 0.95
ARHGEF1-213ENST00000595897 RIMBP3Q9UFD9 1639 aa21■□□□□ 0.95
ARHGEF1-213ENST00000595897 SSH2Q76I76 1423 aa20.99■□□□□ 0.95
ARHGEF1-213ENST00000595897 FAM184AQ8NB25 1140 aa20.99■□□□□ 0.95
ARHGEF1-213ENST00000595897 STAP2Q9UGK3 403 aa20.99■□□□□ 0.95
ARHGEF1-213ENST00000595897 MAP4K4O95819 1239 aaPredicted RBP20.99■□□□□ 0.95
ARHGEF1-213ENST00000595897 USP25Q9UHP3 1055 aa20.99■□□□□ 0.95
ARHGEF1-213ENST00000595897 NUTM1Q86Y26 1132 aa20.98■□□□□ 0.95
ARHGEF1-213ENST00000595897 UBTFL1P0CB47 393 aaPredicted RBP20.97■□□□□ 0.95
ARHGEF1-213ENST00000595897 MTERF4Q7Z6M4 381 aaKnown RBP20.97■□□□□ 0.95
ARHGEF1-213ENST00000595897 IL25Q9H293 177 aa20.97■□□□□ 0.95
ARHGEF1-213ENST00000595897 ZNF830Q96NB3 372 aaPredicted RBP20.97■□□□□ 0.95
ARHGEF1-213ENST00000595897 PPP6R1Q9UPN7 881 aa20.97■□□□□ 0.95
ARHGEF1-213ENST00000595897 HSPA4P34932 840 aa20.97■□□□□ 0.95
ARHGEF1-213ENST00000595897 HDGFP51858 240 aaKnown RBP20.97■□□□□ 0.95
ARHGEF1-213ENST00000595897 CNPY2Q9Y2B0 182 aa20.96■□□□□ 0.95
ARHGEF1-213ENST00000595897 MON2Q7Z3U7 1717 aa20.96■□□□□ 0.95
ARHGEF1-213ENST00000595897 PLCB2Q00722 1185 aa20.96■□□□□ 0.95
ARHGEF1-213ENST00000595897 CCDC183Q5T5S1 534 aa20.96■□□□□ 0.95
ARHGEF1-213ENST00000595897 SIRT1Q96EB6 747 aa20.96■□□□□ 0.95
ARHGEF1-213ENST00000595897 NRKQ7Z2Y5 1582 aa20.96■□□□□ 0.95
ARHGEF1-213ENST00000595897 LARP6Q9BRS8 491 aaKnown RBP20.95■□□□□ 0.94
ARHGEF1-213ENST00000595897 C3P01024 1663 aa20.95■□□□□ 0.94
ARHGEF1-213ENST00000595897 SURF6O75683 361 aaKnown RBP20.95■□□□□ 0.94
ARHGEF1-213ENST00000595897 AMPHP49418 695 aa20.95■□□□□ 0.94
ARHGEF1-213ENST00000595897 UVSSAQ2YD98 709 aa20.95■□□□□ 0.94
ARHGEF1-213ENST00000595897 ESF1Q9H501 851 aaKnown RBP20.94■□□□□ 0.94
ARHGEF1-213ENST00000595897 HCLS1P14317 486 aaPredicted RBP20.94■□□□□ 0.94
ARHGEF1-213ENST00000595897 ARHGEF10O15013 1369 aa20.94■□□□□ 0.94
ARHGEF1-213ENST00000595897 OVOS2A0A0J9YW53 1432 aa20.93■□□□□ 0.94
ARHGEF1-213ENST00000595897 OVOS2Q6IE36 1432 aa20.93■□□□□ 0.94
ARHGEF1-213ENST00000595897 ADCY5O95622 1261 aa20.93■□□□□ 0.94
ARHGEF1-213ENST00000595897 USP44Q9H0E7 712 aa20.93■□□□□ 0.94
ARHGEF1-213ENST00000595897 SOS1Q07889 1333 aaPredicted RBP20.93■□□□□ 0.94
ARHGEF1-213ENST00000595897 SETD1AO15047 1707 aaKnown RBP20.93■□□□□ 0.94
ARHGEF1-213ENST00000595897 FIBPO43427 364 aa20.93■□□□□ 0.94
ARHGEF1-213ENST00000595897 ZSCAN22P10073 491 aaPredicted RBP20.93■□□□□ 0.94
ARHGEF1-213ENST00000595897 AOX1Q06278 1338 aa20.92■□□□□ 0.94
ARHGEF1-213ENST00000595897 EYA1Q99502 592 aa20.92■□□□□ 0.94
ARHGEF1-213ENST00000595897 TTC12Q9H892 705 aaPredicted RBP20.92■□□□□ 0.94
ARHGEF1-213ENST00000595897 STX6O43752 255 aa20.91■□□□□ 0.94
ARHGEF1-213ENST00000595897 LETM1O95202 739 aaPredicted RBP20.91■□□□□ 0.94
ARHGEF1-213ENST00000595897 IL17RAQ96F46 866 aa20.91■□□□□ 0.94
ARHGEF1-213ENST00000595897 SMC3Q9UQE7 1217 aa20.91■□□□□ 0.94
ARHGEF1-213ENST00000595897 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.91■□□□□ 0.94
ARHGEF1-213ENST00000595897 ROBO2Q9HCK4 1378 aa20.91■□□□□ 0.94
ARHGEF1-213ENST00000595897 EPB41L2O43491 1005 aaKnown RBP20.91■□□□□ 0.94
ARHGEF1-213ENST00000595897 UBE2HP62256 183 aa20.91■□□□□ 0.94
ARHGEF1-213ENST00000595897 ITSN1Q15811 1721 aa20.91■□□□□ 0.94
ARHGEF1-213ENST00000595897 PLEKHG3A1L390 1219 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms