RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 NASPP49321 788 aaPredicted RBP18.85■□□□□ 0.61
ZNF541-205ENST00000595558 CYP2E1P05181 493 aaPredicted RBP18.84■□□□□ 0.61
ZNF541-205ENST00000595558 CAVIN1Q6NZI2 390 aaKnown RBP18.84■□□□□ 0.61
ZNF541-205ENST00000595558 RPAP2Q8IXW5 612 aaPredicted RBP18.84■□□□□ 0.61
ZNF541-205ENST00000595558 KIF24Q5T7B8 1368 aa18.84■□□□□ 0.61
ZNF541-205ENST00000595558 LMBRD1Q9NUN5 540 aa18.84■□□□□ 0.61
ZNF541-205ENST00000595558 TTC21AQ8NDW8 1320 aa18.84■□□□□ 0.61
ZNF541-205ENST00000595558 SBNO1A3KN83 1393 aa18.84■□□□□ 0.61
ZNF541-205ENST00000595558 ARHGAP23Q9P227 1491 aa18.83■□□□□ 0.61
ZNF541-205ENST00000595558 ZDHHC9Q9Y397 364 aa18.83■□□□□ 0.61
ZNF541-205ENST00000595558 ANXA1P04083 346 aa18.83■□□□□ 0.6
ZNF541-205ENST00000595558 FOXD4L5Q5VV16 416 aaPredicted RBP18.83■□□□□ 0.6
ZNF541-205ENST00000595558 IGSF1Q8N6C5 1336 aa18.83■□□□□ 0.6
ZNF541-205ENST00000595558 TOPAZ1Q8N9V7 1692 aa18.83■□□□□ 0.6
ZNF541-205ENST00000595558 FOXD4L4Q8WXT5 416 aaPredicted RBP18.83■□□□□ 0.6
ZNF541-205ENST00000595558 LGR6Q9HBX8 967 aa18.83■□□□□ 0.6
ZNF541-205ENST00000595558 PHF8Q9UPP1 1060 aa18.83■□□□□ 0.6
ZNF541-205ENST00000595558 NBPF6Q5VWK0 638 aa18.82■□□□□ 0.6
ZNF541-205ENST00000595558 NBPF4Q96M43 638 aa18.82■□□□□ 0.6
ZNF541-205ENST00000595558 KCNQ3O43525 872 aa18.82■□□□□ 0.6
ZNF541-205ENST00000595558 PTMSP20962 102 aa18.82■□□□□ 0.6
ZNF541-205ENST00000595558 RBM27Q9P2N5 1060 aaKnown RBP18.82■□□□□ 0.6
ZNF541-205ENST00000595558 PSME1Q06323 249 aa18.81■□□□□ 0.6
ZNF541-205ENST00000595558 SLIT1O75093 1534 aa18.81■□□□□ 0.6
ZNF541-205ENST00000595558 DDX17Q92841 729 aaKnown RBP18.81■□□□□ 0.6
ZNF541-205ENST00000595558 EIF2S2P20042 333 aaKnown RBP18.8■□□□□ 0.6
ZNF541-205ENST00000595558 EXOC6BQ9Y2D4 811 aa18.8■□□□□ 0.6
ZNF541-205ENST00000595558 PRPF40AO75400 957 aaKnown RBP18.8■□□□□ 0.6
ZNF541-205ENST00000595558 ZSCAN23Q3MJ62 389 aa18.8■□□□□ 0.6
ZNF541-205ENST00000595558 PHAXQ9H814 394 aaKnown RBP18.8■□□□□ 0.6
ZNF541-205ENST00000595558 PIK3C2AO00443 1686 aa18.8■□□□□ 0.6
ZNF541-205ENST00000595558 FER1L4A9Z1Z3 1794 aa18.79■□□□□ 0.6
ZNF541-205ENST00000595558 GNAT3A8MTJ3 354 aa18.79■□□□□ 0.6
ZNF541-205ENST00000595558 FKBP5Q13451 457 aaPredicted RBP18.79■□□□□ 0.6
ZNF541-205ENST00000595558 NUCB2P80303 420 aa18.79■□□□□ 0.6
ZNF541-205ENST00000595558 ANKLE2Q86XL3 938 aa18.79■□□□□ 0.6
ZNF541-205ENST00000595558 GPT2Q8TD30 523 aa18.79■□□□□ 0.6
ZNF541-205ENST00000595558 KIAA0232Q92628 1395 aa18.79■□□□□ 0.6
ZNF541-205ENST00000595558 PPP1R9BQ96SB3 815 aa18.78■□□□□ 0.6
ZNF541-205ENST00000595558 NSFL1CQ9UNZ2 370 aaKnown RBP18.78■□□□□ 0.6
ZNF541-205ENST00000595558 ARHGEF10O15013 1369 aa18.78■□□□□ 0.6
ZNF541-205ENST00000595558 RBSNQ9H1K0 784 aa18.78■□□□□ 0.6
ZNF541-205ENST00000595558 PTPRCP08575 1304 aa18.77■□□□□ 0.6
ZNF541-205ENST00000595558 PDE1AP54750 535 aa18.77■□□□□ 0.6
ZNF541-205ENST00000595558 CCDC173Q0VFZ6 552 aa18.77■□□□□ 0.6
ZNF541-205ENST00000595558 ST18O60284 1047 aa18.77■□□□□ 0.6
ZNF541-205ENST00000595558 PRIM1P49642 420 aaKnown RBP18.77■□□□□ 0.6
ZNF541-205ENST00000595558 KDRP35968 1356 aa18.76■□□□□ 0.59
ZNF541-205ENST00000595558 CASC1Q6TDU7 716 aa18.76■□□□□ 0.59
ZNF541-205ENST00000595558 MPRIPQ6WCQ1 1025 aa18.76■□□□□ 0.59
ZNF541-205ENST00000595558 ERC2O15083 957 aa18.76■□□□□ 0.59
ZNF541-205ENST00000595558 PNMA6EA0A0J9YXQ4 647 aa18.75■□□□□ 0.59
ZNF541-205ENST00000595558 ZNF445P59923 1031 aa18.75■□□□□ 0.59
ZNF541-205ENST00000595558 FLIIQ13045 1269 aa18.75■□□□□ 0.59
ZNF541-205ENST00000595558 NOL8Q76FK4 1167 aaKnown RBP18.75■□□□□ 0.59
ZNF541-205ENST00000595558 RGPD1P0DJD0 1748 aa18.75■□□□□ 0.59
ZNF541-205ENST00000595558 IBTKQ9P2D0 1353 aaPredicted RBP18.75■□□□□ 0.59
ZNF541-205ENST00000595558 REC8O95072 547 aa18.74■□□□□ 0.59
ZNF541-205ENST00000595558 NEK4P51957 841 aa18.74■□□□□ 0.59
ZNF541-205ENST00000595558 PALD1Q9ULE6 856 aa18.74■□□□□ 0.59
ZNF541-205ENST00000595558 HAP1P54257 671 aaPredicted RBP18.74■□□□□ 0.59
ZNF541-205ENST00000595558 NALCNQ8IZF0 1738 aa18.74■□□□□ 0.59
ZNF541-205ENST00000595558 STK31Q9BXU1 1019 aa18.73■□□□□ 0.59
ZNF541-205ENST00000595558 PRAMEF22A3QJZ6 481 aa18.73■□□□□ 0.59
ZNF541-205ENST00000595558 CWC22Q9HCG8 908 aaKnown RBP18.73■□□□□ 0.59
ZNF541-205ENST00000595558 AXIN2Q9Y2T1 843 aa18.73■□□□□ 0.59
ZNF541-205ENST00000595558 TMEM63CQ9P1W3 806 aa18.72■□□□□ 0.59
ZNF541-205ENST00000595558 TMX3Q96JJ7 454 aa18.72■□□□□ 0.59
ZNF541-205ENST00000595558 ZSCAN30Q86W11 494 aa18.71■□□□□ 0.59
ZNF541-205ENST00000595558 HMMRO75330 724 aa18.7■□□□□ 0.58
ZNF541-205ENST00000595558 ZC3H6P61129 1189 aaKnown RBP18.7■□□□□ 0.58
ZNF541-205ENST00000595558 TAF7Q15545 349 aaPredicted RBP18.7■□□□□ 0.58
ZNF541-205ENST00000595558 OSBPL3Q9H4L5 887 aa18.7■□□□□ 0.58
ZNF541-205ENST00000595558 LRRFIP2Q9Y608 721 aaKnown RBP18.7■□□□□ 0.58
ZNF541-205ENST00000595558 FOXD4L6Q3SYB3 417 aaPredicted RBP18.7■□□□□ 0.58
ZNF541-205ENST00000595558 FOXD4L3Q6VB84 417 aaPredicted RBP18.7■□□□□ 0.58
ZNF541-205ENST00000595558 UNC5CLQ8IV45 518 aa18.7■□□□□ 0.58
ZNF541-205ENST00000595558 ANP32BQ92688 251 aaKnown RBP18.7■□□□□ 0.58
ZNF541-205ENST00000595558 SYCE3A1L190 88 aa18.7■□□□□ 0.58
ZNF541-205ENST00000595558 HDGFL1Q5TGJ6 251 aa18.7■□□□□ 0.58
ZNF541-205ENST00000595558 SALL3Q9BXA9 1300 aa18.69■□□□□ 0.58
ZNF541-205ENST00000595558 HSP90AA2PQ14568 343 aaPredicted RBP18.69■□□□□ 0.58
ZNF541-205ENST00000595558 RILPL2Q969X0 211 aa18.69■□□□□ 0.58
ZNF541-205ENST00000595558 IL25Q9H293 177 aa18.69■□□□□ 0.58
ZNF541-205ENST00000595558 NWD1Q149M9 1564 aa18.69■□□□□ 0.58
ZNF541-205ENST00000595558 GNAI2P04899 355 aa18.69■□□□□ 0.58
ZNF541-205ENST00000595558 IP6K1Q92551 441 aa18.69■□□□□ 0.58
ZNF541-205ENST00000595558 ESYT1Q9BSJ8 1104 aa18.69■□□□□ 0.58
ZNF541-205ENST00000595558 IL1RAPL2Q9NP60 686 aa18.69■□□□□ 0.58
ZNF541-205ENST00000595558 MAP3K5Q99683 1374 aa18.68■□□□□ 0.58
ZNF541-205ENST00000595558 GCP02774 474 aa18.68■□□□□ 0.58
ZNF541-205ENST00000595558 KIAA1211Q6ZU35 1233 aa18.68■□□□□ 0.58
ZNF541-205ENST00000595558 CCT4P50991 539 aaKnown RBP18.68■□□□□ 0.58
ZNF541-205ENST00000595558 CCDC30Q5VVM6 783 aa18.68■□□□□ 0.58
ZNF541-205ENST00000595558 CABLES1Q8TDN4 633 aa18.68■□□□□ 0.58
ZNF541-205ENST00000595558 CHPF2Q9P2E5 772 aa18.68■□□□□ 0.58
ZNF541-205ENST00000595558 XRN1Q8IZH2 1706 aaKnown RBP18.68■□□□□ 0.58
ZNF541-205ENST00000595558 TRIM6-TRIM34B2RNG4 842 aa18.67■□□□□ 0.58
ZNF541-205ENST00000595558 UPF3BQ9BZI7 483 aaKnown RBP18.67■□□□□ 0.58
ZNF541-205ENST00000595558 ANO2Q9NQ90 1003 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms