RNA–Protein interactions for RNA: ENST00000594668.5

ZNF548-203, Transcript of zinc finger protein 548, humanhuman

TSL 5

Gene ZNF548, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-203ENST00000594668 KDM3BQ7LBC6 1761 aa12.2□□□□□ -0.46
ZNF548-203ENST00000594668 PAPPAQ13219 1627 aa12.19□□□□□ -0.46
ZNF548-203ENST00000594668 LMOD3Q0VAK6 560 aa12.19□□□□□ -0.46
ZNF548-203ENST00000594668 CCDC27Q2M243 656 aa12.19□□□□□ -0.46
ZNF548-203ENST00000594668 NCBP3Q53F19 620 aaKnown RBP12.19□□□□□ -0.46
ZNF548-203ENST00000594668 WWC1Q8IX03 1113 aa12.19□□□□□ -0.46
ZNF548-203ENST00000594668 UBR2Q8IWV8 1755 aa12.18□□□□□ -0.46
ZNF548-203ENST00000594668 APBA3O96018 575 aa12.18□□□□□ -0.46
ZNF548-203ENST00000594668 TEFQ10587 303 aa12.18□□□□□ -0.46
ZNF548-203ENST00000594668 SLC39A6Q13433 755 aa12.18□□□□□ -0.46
ZNF548-203ENST00000594668 ATG3Q9NT62 314 aa12.18□□□□□ -0.46
ZNF548-203ENST00000594668 MIS18AQ9NYP9 233 aa12.18□□□□□ -0.46
ZNF548-203ENST00000594668 ASAP1Q9ULH1 1129 aa12.18□□□□□ -0.46
ZNF548-203ENST00000594668 TAF1LQ8IZX4 1826 aa12.17□□□□□ -0.46
ZNF548-203ENST00000594668 KCNQ3O43525 872 aa12.17□□□□□ -0.46
ZNF548-203ENST00000594668 TAF7Q15545 349 aaPredicted RBP12.17□□□□□ -0.46
ZNF548-203ENST00000594668 RGPD3A6NKT7 1758 aaPredicted RBP12.16□□□□□ -0.46
ZNF548-203ENST00000594668 RGPD4Q7Z3J3 1758 aa12.16□□□□□ -0.46
ZNF548-203ENST00000594668 BTBD11A6QL63 1104 aa12.16□□□□□ -0.46
ZNF548-203ENST00000594668 DEFB132Q7Z7B7 95 aa12.16□□□□□ -0.46
ZNF548-203ENST00000594668 CCDC125Q86Z20 511 aa12.16□□□□□ -0.46
ZNF548-203ENST00000594668 ZNF521Q96K83 1311 aa12.15□□□□□ -0.46
ZNF548-203ENST00000594668 PLSCR1O15162 318 aa12.15□□□□□ -0.46
ZNF548-203ENST00000594668 HNRNPUQ00839 825 aaKnown RBP eCLIP12.15□□□□□ -0.46
ZNF548-203ENST00000594668 EN1Q05925 392 aaPredicted RBP12.15□□□□□ -0.46
ZNF548-203ENST00000594668 NGEFQ8N5V2 710 aa12.15□□□□□ -0.46
ZNF548-203ENST00000594668 LAS1LQ9Y4W2 734 aaKnown RBP12.15□□□□□ -0.46
ZNF548-203ENST00000594668 CHL1O00533 1208 aa12.14□□□□□ -0.47
ZNF548-203ENST00000594668 ZNF853P0CG23 659 aa12.14□□□□□ -0.47
ZNF548-203ENST00000594668 SF3B2Q13435 895 aaKnown RBP12.14□□□□□ -0.47
ZNF548-203ENST00000594668 ZNF790Q6PG37 636 aa12.14□□□□□ -0.47
ZNF548-203ENST00000594668 WDR63Q8IWG1 891 aa12.14□□□□□ -0.47
ZNF548-203ENST00000594668 PROM2Q8N271 834 aa12.14□□□□□ -0.47
ZNF548-203ENST00000594668 SPINK5Q9NQ38 1064 aaPredicted RBP12.14□□□□□ -0.47
ZNF548-203ENST00000594668 KCPQ6ZWJ8 1503 aa12.14□□□□□ -0.47
ZNF548-203ENST00000594668 ZNF831Q5JPB2 1677 aa12.13□□□□□ -0.47
ZNF548-203ENST00000594668 RREB1Q92766 1687 aa12.13□□□□□ -0.47
ZNF548-203ENST00000594668 KCNQ4P56696 695 aa12.13□□□□□ -0.47
ZNF548-203ENST00000594668 EZH2Q15910 746 aaKnown RBP12.13□□□□□ -0.47
ZNF548-203ENST00000594668 SMARCC1Q92922 1105 aaPredicted RBP12.13□□□□□ -0.47
ZNF548-203ENST00000594668 CFAP44Q96MT7 982 aa12.13□□□□□ -0.47
ZNF548-203ENST00000594668 SLC4A9Q96Q91 983 aa12.13□□□□□ -0.47
ZNF548-203ENST00000594668 CAMKK2Q96RR4 588 aa12.13□□□□□ -0.47
ZNF548-203ENST00000594668 TJP1Q07157 1748 aa12.13□□□□□ -0.47
ZNF548-203ENST00000594668 PALLDQ8WX93 1383 aa12.13□□□□□ -0.47
ZNF548-203ENST00000594668 C5P01031 1676 aa12.13□□□□□ -0.47
ZNF548-203ENST00000594668 MYH14Q7Z406 1995 aaKnown RBP12.12□□□□□ -0.47
ZNF548-203ENST00000594668 COL5A3P25940 1745 aaPredicted RBP12.12□□□□□ -0.47
ZNF548-203ENST00000594668 PTCD1O75127 700 aaKnown RBP12.12□□□□□ -0.47
ZNF548-203ENST00000594668 BAG6P46379 1132 aa12.12□□□□□ -0.47
ZNF548-203ENST00000594668 CALD1Q05682 793 aaKnown RBP12.12□□□□□ -0.47
ZNF548-203ENST00000594668 RBM42Q9BTD8 480 aaKnown RBP12.12□□□□□ -0.47
ZNF548-203ENST00000594668 MBIPQ9NS73 344 aa12.12□□□□□ -0.47
ZNF548-203ENST00000594668 IFT57Q9NWB7 429 aa12.12□□□□□ -0.47
ZNF548-203ENST00000594668 BABAM1Q9NWV8 329 aa12.12□□□□□ -0.47
ZNF548-203ENST00000594668 TSPYL4Q9UJ04 414 aa12.12□□□□□ -0.47
ZNF548-203ENST00000594668 NUP188Q5SRE5 1749 aa12.11□□□□□ -0.47
ZNF548-203ENST00000594668 LOC102724428A0A0B4J2F2 783 aa12.11□□□□□ -0.47
ZNF548-203ENST00000594668 SIK1P57059 783 aa12.11□□□□□ -0.47
ZNF548-203ENST00000594668 GNAI1P63096 354 aa12.11□□□□□ -0.47
ZNF548-203ENST00000594668 TXNRD1Q16881 649 aa12.11□□□□□ -0.47
ZNF548-203ENST00000594668 TTC5Q8N0Z6 440 aa12.11□□□□□ -0.47
ZNF548-203ENST00000594668 CDCA7LQ96GN5 454 aa12.11□□□□□ -0.47
ZNF548-203ENST00000594668 ZNF496Q96IT1 587 aaPredicted RBP12.11□□□□□ -0.47
ZNF548-203ENST00000594668 LRRC4BQ9NT99 713 aa12.11□□□□□ -0.47
ZNF548-203ENST00000594668 IL16Q14005 1332 aa12.11□□□□□ -0.47
ZNF548-203ENST00000594668 EIF4A1P60842 406 aaKnown RBP12.1□□□□□ -0.47
ZNF548-203ENST00000594668 TSR2Q969E8 191 aaKnown RBP12.1□□□□□ -0.47
ZNF548-203ENST00000594668 CCNL1Q9UK58 526 aaPredicted RBP12.1□□□□□ -0.47
ZNF548-203ENST00000594668 CICQ96RK0 1608 aaPredicted RBP12.1□□□□□ -0.47
ZNF548-203ENST00000594668 PRAMEF22A3QJZ6 481 aa12.09□□□□□ -0.47
ZNF548-203ENST00000594668 SOCS7O14512 581 aa12.09□□□□□ -0.47
ZNF548-203ENST00000594668 ATP6V1AP38606 617 aa12.09□□□□□ -0.47
ZNF548-203ENST00000594668 GOLGA2Q08379 1002 aa12.09□□□□□ -0.47
ZNF548-203ENST00000594668 SLFN5Q08AF3 891 aa12.09□□□□□ -0.47
ZNF548-203ENST00000594668 ITPK1Q13572 414 aa12.09□□□□□ -0.47
ZNF548-203ENST00000594668 KRT24Q2M2I5 525 aa12.09□□□□□ -0.47
ZNF548-203ENST00000594668 FMNL2Q96PY5 1086 aa12.09□□□□□ -0.47
ZNF548-203ENST00000594668 TUBGCP6Q96RT7 1819 aa12.09□□□□□ -0.47
ZNF548-203ENST00000594668 HEG1Q9ULI3 1381 aa12.08□□□□□ -0.48
ZNF548-203ENST00000594668 LAMB4A4D0S4 1761 aa12.08□□□□□ -0.48
ZNF548-203ENST00000594668 SLC27A3Q5K4L6 730 aa12.08□□□□□ -0.48
ZNF548-203ENST00000594668 DNAJC10Q8IXB1 793 aa12.08□□□□□ -0.48
ZNF548-203ENST00000594668 YTHDC1Q96MU7 727 aaKnown RBP12.08□□□□□ -0.48
ZNF548-203ENST00000594668 ZBED9Q6R2W3 1325 aa12.08□□□□□ -0.48
ZNF548-203ENST00000594668 FANCIQ9NVI1 1328 aa12.08□□□□□ -0.48
ZNF548-203ENST00000594668 GIGYF1O75420 1035 aaPredicted RBP12.07□□□□□ -0.48
ZNF548-203ENST00000594668 C4BP0C0L5 1744 aa12.07□□□□□ -0.48
ZNF548-203ENST00000594668 TRMT2AQ8IZ69 625 aaKnown RBP12.07□□□□□ -0.48
ZNF548-203ENST00000594668 VSIG10Q8N0Z9 540 aa12.07□□□□□ -0.48
ZNF548-203ENST00000594668 C8orf58Q8NAV2 365 aa12.07□□□□□ -0.48
ZNF548-203ENST00000594668 LINC00116Q8NCU8 138 aa12.07□□□□□ -0.48
ZNF548-203ENST00000594668 USP16Q9Y5T5 823 aa12.07□□□□□ -0.48
ZNF548-203ENST00000594668 UBR3Q6ZT12 1888 aa12.06□□□□□ -0.48
ZNF548-203ENST00000594668 E9PSI1 815 aa12.06□□□□□ -0.48
ZNF548-203ENST00000594668 SNRPA1P09661 255 aaKnown RBP12.06□□□□□ -0.48
ZNF548-203ENST00000594668 TSPYL6Q8N831 410 aa12.06□□□□□ -0.48
ZNF548-203ENST00000594668 CACNA1FO60840 1977 aa12.06□□□□□ -0.48
ZNF548-203ENST00000594668 ELL2O00472 640 aaPredicted RBP12.05□□□□□ -0.48
ZNF548-203ENST00000594668 CYP19A1P11511 503 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms