RNA–Protein interactions for RNA: ENST00000594047.2

SYNM-204, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 6,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-204ENST00000594047 FERMT3Q86UX7 667 aa21.41■■□□□ 1.02
SYNM-204ENST00000594047 PLS1Q14651 629 aa21.41■■□□□ 1.02
SYNM-204ENST00000594047 SLC5A1P13866 664 aa21.41■■□□□ 1.02
SYNM-204ENST00000594047 TMX1Q9H3N1 280 aa21.41■■□□□ 1.02
SYNM-204ENST00000594047 MMRN2Q9H8L6 949 aa21.41■■□□□ 1.02
SYNM-204ENST00000594047 JAG2Q9Y219 1238 aa21.41■■□□□ 1.02
SYNM-204ENST00000594047 DDX46Q7L014 1031 aaKnown RBP21.4■■□□□ 1.02
SYNM-204ENST00000594047 NBPF8Q3BBV2 869 aa21.4■■□□□ 1.02
SYNM-204ENST00000594047 ZNF408Q9H9D4 720 aa21.4■■□□□ 1.02
SYNM-204ENST00000594047 CUL5Q93034 780 aa21.4■■□□□ 1.02
SYNM-204ENST00000594047 GCC1Q96CN9 775 aa21.4■■□□□ 1.02
SYNM-204ENST00000594047 MRC2Q9UBG0 1479 aa21.4■■□□□ 1.02
SYNM-204ENST00000594047 PRPF40BQ6NWY9 871 aaKnown RBP21.4■■□□□ 1.02
SYNM-204ENST00000594047 ANKRD18BA2A2Z9 1011 aa21.39■■□□□ 1.02
SYNM-204ENST00000594047 ATP6V1AP38606 617 aa21.39■■□□□ 1.02
SYNM-204ENST00000594047 ST5P78524 1137 aa21.39■■□□□ 1.02
SYNM-204ENST00000594047 NBPF6Q5VWK0 638 aa21.39■■□□□ 1.02
SYNM-204ENST00000594047 NBPF5PQ86XG9 351 aaPredicted RBP21.39■■□□□ 1.02
SYNM-204ENST00000594047 NBPF4Q96M43 638 aa21.39■■□□□ 1.02
SYNM-204ENST00000594047 ARGLU1Q9NWB6 273 aaPredicted RBP21.39■■□□□ 1.02
SYNM-204ENST00000594047 CCDC61Q9Y6R9 512 aa21.39■■□□□ 1.02
SYNM-204ENST00000594047 NAIPQ13075 1403 aa21.39■■□□□ 1.02
SYNM-204ENST00000594047 JMYQ8N9B5 988 aa21.39■■□□□ 1.01
SYNM-204ENST00000594047 A0A087WZG4 1122 aa21.39■■□□□ 1.01
SYNM-204ENST00000594047 TMEM57Q8N5G2 664 aa21.39■■□□□ 1.01
SYNM-204ENST00000594047 VEZTQ9HBM0 779 aa21.38■■□□□ 1.01
SYNM-204ENST00000594047 SPATA32Q96LK8 384 aa21.38■■□□□ 1.01
SYNM-204ENST00000594047 RIMBP2O15034 1052 aa21.38■■□□□ 1.01
SYNM-204ENST00000594047 ATF7IPQ6VMQ6 1270 aa21.38■■□□□ 1.01
SYNM-204ENST00000594047 CHD1LQ86WJ1 897 aa21.38■■□□□ 1.01
SYNM-204ENST00000594047 MACROD2A1Z1Q3 448 aa21.37■■□□□ 1.01
SYNM-204ENST00000594047 EIF5P55010 431 aaKnown RBP21.37■■□□□ 1.01
SYNM-204ENST00000594047 HAND2P61296 217 aa21.37■■□□□ 1.01
SYNM-204ENST00000594047 CCDC83Q8IWF9 413 aa21.37■■□□□ 1.01
SYNM-204ENST00000594047 PDCP20941 246 aa21.37■■□□□ 1.01
SYNM-204ENST00000594047 CCT2P78371 535 aaKnown RBP21.37■■□□□ 1.01
SYNM-204ENST00000594047 LRRFIP2Q9Y608 721 aaKnown RBP21.37■■□□□ 1.01
SYNM-204ENST00000594047 BIN2Q9UBW5 565 aaPredicted RBP21.36■■□□□ 1.01
SYNM-204ENST00000594047 CTNNA3Q9UI47 895 aa21.36■■□□□ 1.01
SYNM-204ENST00000594047 AKAP2Q9Y2D5 859 aa21.36■■□□□ 1.01
SYNM-204ENST00000594047 MAP3K2Q9Y2U5 619 aa21.36■■□□□ 1.01
SYNM-204ENST00000594047 NFE2L2Q16236 605 aa21.36■■□□□ 1.01
SYNM-204ENST00000594047 ACBD3Q9H3P7 528 aa21.36■■□□□ 1.01
SYNM-204ENST00000594047 CD109Q6YHK3 1445 aa21.36■■□□□ 1.01
SYNM-204ENST00000594047 TFCP2L1Q9NZI6 479 aa21.35■■□□□ 1.01
SYNM-204ENST00000594047 CDKL5O76039 1030 aa21.35■■□□□ 1.01
SYNM-204ENST00000594047 ANKRD1Q15327 319 aa21.35■■□□□ 1.01
SYNM-204ENST00000594047 TSHZ3Q63HK5 1081 aa21.35■■□□□ 1.01
SYNM-204ENST00000594047 TRAK2O60296 914 aa21.34■■□□□ 1.01
SYNM-204ENST00000594047 DESP17661 470 aa21.34■■□□□ 1.01
SYNM-204ENST00000594047 AKNAQ7Z591 1439 aa21.34■■□□□ 1.01
SYNM-204ENST00000594047 MAP3K12Q12852 859 aa21.34■■□□□ 1.01
SYNM-204ENST00000594047 TRIM21P19474 475 aaKnown RBP21.34■■□□□ 1.01
SYNM-204ENST00000594047 PUF60Q9UHX1 559 aaKnown RBP21.34■■□□□ 1.01
SYNM-204ENST00000594047 KIF21BO75037 1637 aa21.34■■□□□ 1.01
SYNM-204ENST00000594047 TMPOP42166 694 aaKnown RBP21.34■■□□□ 1.01
SYNM-204ENST00000594047 LARP1Q6PKG0 1096 aaKnown RBP21.34■■□□□ 1.01
SYNM-204ENST00000594047 H0YHG0 523 aa21.34■■□□□ 1.01
SYNM-204ENST00000594047 MYO1BO43795 1136 aa21.34■■□□□ 1.01
SYNM-204ENST00000594047 SKAP1Q86WV1 359 aa21.34■■□□□ 1.01
SYNM-204ENST00000594047 GJA3Q9Y6H8 435 aa21.34■■□□□ 1.01
SYNM-204ENST00000594047 ANKRD24Q8TF21 1146 aa21.33■■□□□ 1.01
SYNM-204ENST00000594047 CTNNBL1Q8WYA6 563 aaPredicted RBP21.33■■□□□ 1.01
SYNM-204ENST00000594047 NLRP5P59047 1200 aa21.33■■□□□ 1
SYNM-204ENST00000594047 ANAPC15P60006 121 aa21.33■■□□□ 1
SYNM-204ENST00000594047 TSPYL1Q9H0U9 437 aa21.33■■□□□ 1
SYNM-204ENST00000594047 ZNF287Q9HBT7 754 aa21.33■■□□□ 1
SYNM-204ENST00000594047 KAT6BQ8WYB5 2073 aa21.33■■□□□ 1
SYNM-204ENST00000594047 ARHGEF11O15085 1522 aa21.32■■□□□ 1
SYNM-204ENST00000594047 CDK13Q14004 1512 aaKnown RBP21.32■■□□□ 1
SYNM-204ENST00000594047 FAM83GA6ND36 823 aa21.32■■□□□ 1
SYNM-204ENST00000594047 GOLIM4O00461 696 aa21.32■■□□□ 1
SYNM-204ENST00000594047 ERLIN2O94905 339 aa21.32■■□□□ 1
SYNM-204ENST00000594047 USP8P40818 1118 aa21.32■■□□□ 1
SYNM-204ENST00000594047 MVPQ14764 893 aaKnown RBP21.32■■□□□ 1
SYNM-204ENST00000594047 CC2D2AQ9P2K1 1620 aa21.32■■□□□ 1
SYNM-204ENST00000594047 SLC39A6Q13433 755 aa21.32■■□□□ 1
SYNM-204ENST00000594047 KIAA1328Q86T90 577 aa21.32■■□□□ 1
SYNM-204ENST00000594047 CKAP2LQ8IYA6 745 aa21.32■■□□□ 1
SYNM-204ENST00000594047 RABEP1Q15276 862 aa21.31■■□□□ 1
SYNM-204ENST00000594047 BRD4O60885 1362 aaPredicted RBP21.31■■□□□ 1
SYNM-204ENST00000594047 PANK2Q9BZ23 570 aa21.31■■□□□ 1
SYNM-204ENST00000594047 LDHAL6AQ6ZMR3 332 aa21.31■■□□□ 1
SYNM-204ENST00000594047 ZNF354CQ86Y25 554 aa21.31■■□□□ 1
SYNM-204ENST00000594047 CCDC39Q9UFE4 941 aa21.31■■□□□ 1
SYNM-204ENST00000594047 IFIT3O14879 490 aaKnown RBP21.3■■□□□ 1
SYNM-204ENST00000594047 CT47B1P0C2W7 299 aaPredicted RBP21.3■■□□□ 1
SYNM-204ENST00000594047 SLC12A7Q9Y666 1083 aa21.3■■□□□ 1
SYNM-204ENST00000594047 FAM43AQ8N2R8 423 aa21.3■■□□□ 1
SYNM-204ENST00000594047 UPF3BQ9BZI7 483 aaKnown RBP21.3■■□□□ 1
SYNM-204ENST00000594047 DACH1Q9UI36 760 aa21.3■■□□□ 1
SYNM-204ENST00000594047 MAP3K9P80192 1104 aa21.3■■□□□ 1
SYNM-204ENST00000594047 CTCFLQ8NI51 663 aaPredicted RBP21.3■■□□□ 1
SYNM-204ENST00000594047 TOM1O60784 492 aa21.3■■□□□ 1
SYNM-204ENST00000594047 CABP5Q9NP86 173 aa21.3■■□□□ 1
SYNM-204ENST00000594047 KRT85P78386 507 aa21.29■■□□□ 1
SYNM-204ENST00000594047 ZNF213O14771 459 aa21.29■■□□□ 1
SYNM-204ENST00000594047 ISM2Q6H9L7 571 aa21.29■■□□□ 1
SYNM-204ENST00000594047 TSPY2A6NKD2 308 aa21.29■■□□□ 1
SYNM-204ENST00000594047 COMMD10Q9Y6G5 202 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms