RNA–Protein interactions for RNA: ENST00000593598.5

SNAPC2-202, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

TSL 3

Gene SNAPC2, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-202ENST00000593598 ATG3Q9NT62 314 aa18.12■□□□□ 0.49
SNAPC2-202ENST00000593598 ASAP1Q9ULH1 1129 aa18.12■□□□□ 0.49
SNAPC2-202ENST00000593598 CEMIPQ8WUJ3 1361 aa18.12■□□□□ 0.49
SNAPC2-202ENST00000593598 TEFQ10587 303 aa18.11■□□□□ 0.49
SNAPC2-202ENST00000593598 SLC27A3Q5K4L6 730 aa18.11■□□□□ 0.49
SNAPC2-202ENST00000593598 MCM10Q7L590 875 aa18.11■□□□□ 0.49
SNAPC2-202ENST00000593598 PALLDQ8WX93 1383 aa18.11■□□□□ 0.49
SNAPC2-202ENST00000593598 DLG5Q8TDM6 1919 aa18.1■□□□□ 0.49
SNAPC2-202ENST00000593598 MRC1P22897 1456 aa18.1■□□□□ 0.49
SNAPC2-202ENST00000593598 DCTN1Q14203 1278 aa18.1■□□□□ 0.49
SNAPC2-202ENST00000593598 RREB1Q92766 1687 aa18.09■□□□□ 0.49
SNAPC2-202ENST00000593598 NEUROD2Q15784 382 aa18.09■□□□□ 0.49
SNAPC2-202ENST00000593598 FAM9BQ8IZU0 186 aa18.09■□□□□ 0.49
SNAPC2-202ENST00000593598 MIER1Q8N108 512 aa18.09■□□□□ 0.49
SNAPC2-202ENST00000593598 RRP7AQ9Y3A4 280 aaKnown RBP18.09■□□□□ 0.49
SNAPC2-202ENST00000593598 LY75O60449 1722 aa18.09■□□□□ 0.49
SNAPC2-202ENST00000593598 APAF1O14727 1248 aa18.08■□□□□ 0.48
SNAPC2-202ENST00000593598 LMOD3Q0VAK6 560 aa18.08■□□□□ 0.48
SNAPC2-202ENST00000593598 LRRC4BQ9NT99 713 aa18.08■□□□□ 0.48
SNAPC2-202ENST00000593598 CCNL1Q9UK58 526 aaPredicted RBP18.08■□□□□ 0.48
SNAPC2-202ENST00000593598 NBPF14Q5TI25 921 aa18.07■□□□□ 0.48
SNAPC2-202ENST00000593598 LOC102724428A0A0B4J2F2 783 aa18.06■□□□□ 0.48
SNAPC2-202ENST00000593598 HMGB2P26583 209 aaKnown RBP18.06■□□□□ 0.48
SNAPC2-202ENST00000593598 SIK1P57059 783 aa18.06■□□□□ 0.48
SNAPC2-202ENST00000593598 NUP188Q5SRE5 1749 aa18.06■□□□□ 0.48
SNAPC2-202ENST00000593598 KCNQ4P56696 695 aa18.05■□□□□ 0.48
SNAPC2-202ENST00000593598 SLC39A6Q13433 755 aa18.05■□□□□ 0.48
SNAPC2-202ENST00000593598 TAF7Q15545 349 aaPredicted RBP18.05■□□□□ 0.48
SNAPC2-202ENST00000593598 RBM42Q9BTD8 480 aaKnown RBP18.05■□□□□ 0.48
SNAPC2-202ENST00000593598 BTBD11A6QL63 1104 aa18.04■□□□□ 0.48
SNAPC2-202ENST00000593598 THUMPD2Q9BTF0 503 aaKnown RBP18.04■□□□□ 0.48
SNAPC2-202ENST00000593598 TRIM35Q9UPQ4 493 aa18.04■□□□□ 0.48
SNAPC2-202ENST00000593598 SIPA1L3O60292 1781 aaPredicted RBP18.04■□□□□ 0.48
SNAPC2-202ENST00000593598 PTCD1O75127 700 aaKnown RBP18.03■□□□□ 0.48
SNAPC2-202ENST00000593598 ATP6V1AP38606 617 aa18.03■□□□□ 0.48
SNAPC2-202ENST00000593598 ZNF790Q6PG37 636 aa18.03■□□□□ 0.48
SNAPC2-202ENST00000593598 TTC5Q8N0Z6 440 aa18.03■□□□□ 0.48
SNAPC2-202ENST00000593598 SLC4A9Q96Q91 983 aa18.02■□□□□ 0.48
SNAPC2-202ENST00000593598 ANO8Q9HCE9 1232 aaPredicted RBP18.01■□□□□ 0.47
SNAPC2-202ENST00000593598 STK32BQ9NY57 414 aa18.01■□□□□ 0.47
SNAPC2-202ENST00000593598 PAPPAQ13219 1627 aa18.01■□□□□ 0.47
SNAPC2-202ENST00000593598 ITPK1Q13572 414 aa18■□□□□ 0.47
SNAPC2-202ENST00000593598 SLC15A2Q16348 729 aa18■□□□□ 0.47
SNAPC2-202ENST00000593598 NCBP3Q53F19 620 aaKnown RBP18■□□□□ 0.47
SNAPC2-202ENST00000593598 KCNQ3O43525 872 aa17.99■□□□□ 0.47
SNAPC2-202ENST00000593598 R3HDM1Q15032 1099 aaKnown RBP17.99■□□□□ 0.47
SNAPC2-202ENST00000593598 VSIG10Q8N0Z9 540 aa17.99■□□□□ 0.47
SNAPC2-202ENST00000593598 AKT1S1Q96B36 256 aa17.99■□□□□ 0.47
SNAPC2-202ENST00000593598 MIS18AQ9NYP9 233 aa17.99■□□□□ 0.47
SNAPC2-202ENST00000593598 ZNF831Q5JPB2 1677 aa17.99■□□□□ 0.47
SNAPC2-202ENST00000593598 ZNF827Q17R98 1081 aa17.98■□□□□ 0.47
SNAPC2-202ENST00000593598 CCDC27Q2M243 656 aa17.98■□□□□ 0.47
SNAPC2-202ENST00000593598 LINC00116Q8NCU8 138 aa17.98■□□□□ 0.47
SNAPC2-202ENST00000593598 ZNF496Q96IT1 587 aaPredicted RBP17.98■□□□□ 0.47
SNAPC2-202ENST00000593598 FMNL2Q96PY5 1086 aa17.98■□□□□ 0.47
SNAPC2-202ENST00000593598 BABAM1Q9NWV8 329 aa17.98■□□□□ 0.47
SNAPC2-202ENST00000593598 TAF1LQ8IZX4 1826 aa17.98■□□□□ 0.47
SNAPC2-202ENST00000593598 KCPQ6ZWJ8 1503 aa17.98■□□□□ 0.47
SNAPC2-202ENST00000593598 SENP3-EIF4A1A0A087X0R7 540 aa17.97■□□□□ 0.47
SNAPC2-202ENST00000593598 PSDA5PKW4 1024 aaPredicted RBP17.97■□□□□ 0.47
SNAPC2-202ENST00000593598 C5P01031 1676 aa17.96■□□□□ 0.47
SNAPC2-202ENST00000593598 CALD1Q05682 793 aaKnown RBP17.96■□□□□ 0.47
SNAPC2-202ENST00000593598 LRP5O75197 1615 aa17.96■□□□□ 0.47
SNAPC2-202ENST00000593598 UBR2Q8IWV8 1755 aa17.96■□□□□ 0.47
SNAPC2-202ENST00000593598 HEG1Q9ULI3 1381 aa17.95■□□□□ 0.46
SNAPC2-202ENST00000593598 DNAJC10Q8IXB1 793 aa17.95■□□□□ 0.46
SNAPC2-202ENST00000593598 TFCP2L1Q9NZI6 479 aa17.95■□□□□ 0.46
SNAPC2-202ENST00000593598 TSPYL4Q9UJ04 414 aa17.95■□□□□ 0.46
SNAPC2-202ENST00000593598 CHL1O00533 1208 aa17.94■□□□□ 0.46
SNAPC2-202ENST00000593598 RC3H1Q5TC82 1133 aaKnown RBP17.94■□□□□ 0.46
SNAPC2-202ENST00000593598 WWC1Q8IX03 1113 aa17.94■□□□□ 0.46
SNAPC2-202ENST00000593598 NGEFQ8N5V2 710 aa17.94■□□□□ 0.46
SNAPC2-202ENST00000593598 AK7Q96M32 723 aa17.94■□□□□ 0.46
SNAPC2-202ENST00000593598 TEX13AQ9BXU3 409 aaPredicted RBP17.94■□□□□ 0.46
SNAPC2-202ENST00000593598 SALL2Q9Y467 1007 aaPredicted RBP17.94■□□□□ 0.46
SNAPC2-202ENST00000593598 LAS1LQ9Y4W2 734 aaKnown RBP17.94■□□□□ 0.46
SNAPC2-202ENST00000593598 C4BP0C0L5 1744 aa17.94■□□□□ 0.46
SNAPC2-202ENST00000593598 EIF4A1P60842 406 aaKnown RBP17.93■□□□□ 0.46
SNAPC2-202ENST00000593598 CFAP44Q96MT7 982 aa17.93■□□□□ 0.46
SNAPC2-202ENST00000593598 CNTNAP4Q9C0A0 1308 aa17.93■□□□□ 0.46
SNAPC2-202ENST00000593598 KDM3BQ7LBC6 1761 aa17.92■□□□□ 0.46
SNAPC2-202ENST00000593598 CICQ96RK0 1608 aaPredicted RBP17.92■□□□□ 0.46
SNAPC2-202ENST00000593598 SNRPA1P09661 255 aaKnown RBP17.92■□□□□ 0.46
SNAPC2-202ENST00000593598 CYP19A1P11511 503 aaPredicted RBP17.92■□□□□ 0.46
SNAPC2-202ENST00000593598 TJP1Q07157 1748 aa17.92■□□□□ 0.46
SNAPC2-202ENST00000593598 STARD3NLO95772 234 aa17.91■□□□□ 0.46
SNAPC2-202ENST00000593598 ZNF853P0CG23 659 aa17.91■□□□□ 0.46
SNAPC2-202ENST00000593598 CRKLP46109 303 aaKnown RBP17.91■□□□□ 0.46
SNAPC2-202ENST00000593598 GNAI1P63096 354 aa17.91■□□□□ 0.46
SNAPC2-202ENST00000593598 IFT57Q9NWB7 429 aa17.91■□□□□ 0.46
SNAPC2-202ENST00000593598 COL5A3P25940 1745 aaPredicted RBP17.91■□□□□ 0.46
SNAPC2-202ENST00000593598 GNPATO15228 680 aa17.9■□□□□ 0.46
SNAPC2-202ENST00000593598 FLAD1Q8NFF5 587 aa17.9■□□□□ 0.46
SNAPC2-202ENST00000593598 PNPLA7Q6ZV29 1317 aa17.9■□□□□ 0.46
SNAPC2-202ENST00000593598 RPS6KA4O75676 772 aa17.89■□□□□ 0.45
SNAPC2-202ENST00000593598 INTS5Q6P9B9 1019 aaKnown RBP17.89■□□□□ 0.45
SNAPC2-202ENST00000593598 WDR63Q8IWG1 891 aa17.89■□□□□ 0.45
SNAPC2-202ENST00000593598 RTCBQ9Y3I0 505 aaKnown RBP17.89■□□□□ 0.45
SNAPC2-202ENST00000593598 USP16Q9Y5T5 823 aa17.89■□□□□ 0.45
SNAPC2-202ENST00000593598 MYH14Q7Z406 1995 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms