RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 DCTN1Q14203 1278 aa13.14□□□□□ -0.31
TPM4-216ENST00000592822 MCM10Q7L590 875 aa13.14□□□□□ -0.31
TPM4-216ENST00000592822 PROM2Q8N271 834 aa13.14□□□□□ -0.31
TPM4-216ENST00000592822 SLC52A2Q9HAB3 445 aa13.14□□□□□ -0.31
TPM4-216ENST00000592822 RRP7AQ9Y3A4 280 aaKnown RBP13.14□□□□□ -0.31
TPM4-216ENST00000592822 APAF1O14727 1248 aa13.13□□□□□ -0.31
TPM4-216ENST00000592822 RIPK4P57078 832 aa13.13□□□□□ -0.31
TPM4-216ENST00000592822 FAM9BQ8IZU0 186 aa13.13□□□□□ -0.31
TPM4-216ENST00000592822 RTF1Q92541 710 aaKnown RBP13.13□□□□□ -0.31
TPM4-216ENST00000592822 ATG3Q9NT62 314 aa13.13□□□□□ -0.31
TPM4-216ENST00000592822 ASAP1Q9ULH1 1129 aa13.13□□□□□ -0.31
TPM4-216ENST00000592822 TXNRD1Q16881 649 aa13.12□□□□□ -0.31
TPM4-216ENST00000592822 NUP188Q5SRE5 1749 aa13.12□□□□□ -0.31
TPM4-216ENST00000592822 PAPPAQ13219 1627 aa13.12□□□□□ -0.31
TPM4-216ENST00000592822 PALLDQ8WX93 1383 aa13.11□□□□□ -0.31
TPM4-216ENST00000592822 TEFQ10587 303 aa13.11□□□□□ -0.31
TPM4-216ENST00000592822 NEUROD2Q15784 382 aa13.11□□□□□ -0.31
TPM4-216ENST00000592822 SMARCC1Q92922 1105 aaPredicted RBP13.11□□□□□ -0.31
TPM4-216ENST00000592822 THUMPD2Q9BTF0 503 aaKnown RBP13.11□□□□□ -0.31
TPM4-216ENST00000592822 KCNQ4P56696 695 aa13.1□□□□□ -0.31
TPM4-216ENST00000592822 LRRC4BQ9NT99 713 aa13.1□□□□□ -0.31
TPM4-216ENST00000592822 TRIM35Q9UPQ4 493 aa13.1□□□□□ -0.31
TPM4-216ENST00000592822 SLC39A6Q13433 755 aa13.09□□□□□ -0.31
TPM4-216ENST00000592822 UBR2Q8IWV8 1755 aa13.08□□□□□ -0.32
TPM4-216ENST00000592822 SENP3-EIF4A1A0A087X0R7 540 aa13.08□□□□□ -0.32
TPM4-216ENST00000592822 LMOD3Q0VAK6 560 aa13.08□□□□□ -0.32
TPM4-216ENST00000592822 SLC27A3Q5K4L6 730 aa13.08□□□□□ -0.32
TPM4-216ENST00000592822 CCNL1Q9UK58 526 aaPredicted RBP13.08□□□□□ -0.32
TPM4-216ENST00000592822 TAF1LQ8IZX4 1826 aa13.08□□□□□ -0.32
TPM4-216ENST00000592822 LOC102724428A0A0B4J2F2 783 aa13.07□□□□□ -0.32
TPM4-216ENST00000592822 SIK1P57059 783 aa13.07□□□□□ -0.32
TPM4-216ENST00000592822 TAF7Q15545 349 aaPredicted RBP13.07□□□□□ -0.32
TPM4-216ENST00000592822 SLC4A9Q96Q91 983 aa13.07□□□□□ -0.32
TPM4-216ENST00000592822 ZNF831Q5JPB2 1677 aa13.07□□□□□ -0.32
TPM4-216ENST00000592822 KCPQ6ZWJ8 1503 aa13.07□□□□□ -0.32
TPM4-216ENST00000592822 C5P01031 1676 aa13.06□□□□□ -0.32
TPM4-216ENST00000592822 BTBD11A6QL63 1104 aa13.06□□□□□ -0.32
TPM4-216ENST00000592822 KCNQ3O43525 872 aa13.06□□□□□ -0.32
TPM4-216ENST00000592822 PTCD1O75127 700 aaKnown RBP13.06□□□□□ -0.32
TPM4-216ENST00000592822 RBM42Q9BTD8 480 aaKnown RBP13.06□□□□□ -0.32
TPM4-216ENST00000592822 MIS18AQ9NYP9 233 aa13.06□□□□□ -0.32
TPM4-216ENST00000592822 KDM3BQ7LBC6 1761 aa13.06□□□□□ -0.32
TPM4-216ENST00000592822 ITPK1Q13572 414 aa13.05□□□□□ -0.32
TPM4-216ENST00000592822 ZNF790Q6PG37 636 aa13.05□□□□□ -0.32
TPM4-216ENST00000592822 ANO8Q9HCE9 1232 aaPredicted RBP13.05□□□□□ -0.32
TPM4-216ENST00000592822 TJP1Q07157 1748 aa13.05□□□□□ -0.32
TPM4-216ENST00000592822 CICQ96RK0 1608 aaPredicted RBP13.04□□□□□ -0.32
TPM4-216ENST00000592822 ATP6V1AP38606 617 aa13.04□□□□□ -0.32
TPM4-216ENST00000592822 NCBP3Q53F19 620 aaKnown RBP13.04□□□□□ -0.32
TPM4-216ENST00000592822 COL5A3P25940 1745 aaPredicted RBP13.04□□□□□ -0.32
TPM4-216ENST00000592822 ZNF827Q17R98 1081 aa13.03□□□□□ -0.32
TPM4-216ENST00000592822 CCDC27Q2M243 656 aa13.03□□□□□ -0.32
TPM4-216ENST00000592822 TTC5Q8N0Z6 440 aa13.03□□□□□ -0.32
TPM4-216ENST00000592822 LINC00116Q8NCU8 138 aa13.03□□□□□ -0.32
TPM4-216ENST00000592822 ZNF496Q96IT1 587 aaPredicted RBP13.03□□□□□ -0.32
TPM4-216ENST00000592822 C4BP0C0L5 1744 aa13.02□□□□□ -0.32
TPM4-216ENST00000592822 NBPF14Q5TI25 921 aa13.02□□□□□ -0.33
TPM4-216ENST00000592822 WWC1Q8IX03 1113 aa13.02□□□□□ -0.33
TPM4-216ENST00000592822 AKT1S1Q96B36 256 aa13.02□□□□□ -0.33
TPM4-216ENST00000592822 SALL2Q9Y467 1007 aaPredicted RBP13.02□□□□□ -0.33
TPM4-216ENST00000592822 TUBGCP6Q96RT7 1819 aa13.02□□□□□ -0.33
TPM4-216ENST00000592822 CHL1O00533 1208 aa13.01□□□□□ -0.33
TPM4-216ENST00000592822 R3HDM1Q15032 1099 aaKnown RBP13.01□□□□□ -0.33
TPM4-216ENST00000592822 SLC15A2Q16348 729 aa13.01□□□□□ -0.33
TPM4-216ENST00000592822 VSIG10Q8N0Z9 540 aa13.01□□□□□ -0.33
TPM4-216ENST00000592822 FMNL2Q96PY5 1086 aa13.01□□□□□ -0.33
TPM4-216ENST00000592822 BABAM1Q9NWV8 329 aa13.01□□□□□ -0.33
TPM4-216ENST00000592822 STK32BQ9NY57 414 aa13.01□□□□□ -0.33
TPM4-216ENST00000592822 TSPYL4Q9UJ04 414 aa13.01□□□□□ -0.33
TPM4-216ENST00000592822 HEG1Q9ULI3 1381 aa13.01□□□□□ -0.33
TPM4-216ENST00000592822 MYH14Q7Z406 1995 aaKnown RBP13.01□□□□□ -0.33
TPM4-216ENST00000592822 PSDA5PKW4 1024 aaPredicted RBP13□□□□□ -0.33
TPM4-216ENST00000592822 ZNF853P0CG23 659 aa13□□□□□ -0.33
TPM4-216ENST00000592822 DNAJC10Q8IXB1 793 aa13□□□□□ -0.33
TPM4-216ENST00000592822 LAS1LQ9Y4W2 734 aaKnown RBP13□□□□□ -0.33
TPM4-216ENST00000592822 CYP19A1P11511 503 aaPredicted RBP12.99□□□□□ -0.33
TPM4-216ENST00000592822 EIF4A1P60842 406 aaKnown RBP12.99□□□□□ -0.33
TPM4-216ENST00000592822 CALD1Q05682 793 aaKnown RBP12.99□□□□□ -0.33
TPM4-216ENST00000592822 NGEFQ8N5V2 710 aa12.99□□□□□ -0.33
TPM4-216ENST00000592822 CFAP44Q96MT7 982 aa12.99□□□□□ -0.33
TPM4-216ENST00000592822 UBR3Q6ZT12 1888 aa12.99□□□□□ -0.33
TPM4-216ENST00000592822 QSER1Q2KHR3 1735 aa12.99□□□□□ -0.33
TPM4-216ENST00000592822 CNTNAP4Q9C0A0 1308 aa12.98□□□□□ -0.33
TPM4-216ENST00000592822 PRAMEF22A3QJZ6 481 aa12.98□□□□□ -0.33
TPM4-216ENST00000592822 HMGB2P26583 209 aaKnown RBP12.98□□□□□ -0.33
TPM4-216ENST00000592822 AMIGO3Q86WK7 504 aa12.98□□□□□ -0.33
TPM4-216ENST00000592822 IFT57Q9NWB7 429 aa12.98□□□□□ -0.33
TPM4-216ENST00000592822 ZNF521Q96K83 1311 aa12.97□□□□□ -0.33
TPM4-216ENST00000592822 SNRPA1P09661 255 aaKnown RBP12.97□□□□□ -0.33
TPM4-216ENST00000592822 CRKLP46109 303 aaKnown RBP12.97□□□□□ -0.33
TPM4-216ENST00000592822 GNAI1P63096 354 aa12.97□□□□□ -0.33
TPM4-216ENST00000592822 RC3H1Q5TC82 1133 aaKnown RBP12.97□□□□□ -0.33
TPM4-216ENST00000592822 INTS5Q6P9B9 1019 aaKnown RBP12.97□□□□□ -0.33
TPM4-216ENST00000592822 SMIM5Q71RC9 77 aa12.97□□□□□ -0.33
TPM4-216ENST00000592822 WDR63Q8IWG1 891 aa12.97□□□□□ -0.33
TPM4-216ENST00000592822 AK7Q96M32 723 aa12.97□□□□□ -0.33
TPM4-216ENST00000592822 PDGFDQ9GZP0 370 aaPredicted RBP12.97□□□□□ -0.33
TPM4-216ENST00000592822 MBIPQ9NS73 344 aa12.97□□□□□ -0.33
TPM4-216ENST00000592822 TFCP2L1Q9NZI6 479 aa12.97□□□□□ -0.33
TPM4-216ENST00000592822 CASZ1Q86V15 1759 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms