RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 PEAK1Q9H792 1746 aa18.12■□□□□ 0.49
SMARCA4-219ENST00000592604 ANAPC15P60006 121 aa18.12■□□□□ 0.49
SMARCA4-219ENST00000592604 G2E3Q7L622 706 aa18.12■□□□□ 0.49
SMARCA4-219ENST00000592604 ESYT1Q9BSJ8 1104 aa18.12■□□□□ 0.49
SMARCA4-219ENST00000592604 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.12■□□□□ 0.49
SMARCA4-219ENST00000592604 NALCNQ8IZF0 1738 aa18.12■□□□□ 0.49
SMARCA4-219ENST00000592604 GNAI2P04899 355 aa18.11■□□□□ 0.49
SMARCA4-219ENST00000592604 INTS4Q96HW7 963 aaKnown RBP18.11■□□□□ 0.49
SMARCA4-219ENST00000592604 HSP90AB2PQ58FF8 381 aa18.11■□□□□ 0.49
SMARCA4-219ENST00000592604 ARHGEF10O15013 1369 aa18.1■□□□□ 0.49
SMARCA4-219ENST00000592604 USP31Q70CQ4 1352 aa18.1■□□□□ 0.49
SMARCA4-219ENST00000592604 MCM5P33992 734 aa18.1■□□□□ 0.49
SMARCA4-219ENST00000592604 NSFL1CQ9UNZ2 370 aaKnown RBP18.1■□□□□ 0.49
SMARCA4-219ENST00000592604 F6X3S4 739 aa18.1■□□□□ 0.49
SMARCA4-219ENST00000592604 MCCP23508 829 aa18.09■□□□□ 0.49
SMARCA4-219ENST00000592604 SYCE3A1L190 88 aa18.09■□□□□ 0.49
SMARCA4-219ENST00000592604 PLEKHG3A1L390 1219 aa18.09■□□□□ 0.49
SMARCA4-219ENST00000592604 SLC4A10Q6U841 1118 aa18.09■□□□□ 0.49
SMARCA4-219ENST00000592604 PDCL3Q9H2J4 239 aa18.09■□□□□ 0.49
SMARCA4-219ENST00000592604 SSH2Q76I76 1423 aa18.09■□□□□ 0.49
SMARCA4-219ENST00000592604 CHAMP1Q96JM3 812 aa18.09■□□□□ 0.49
SMARCA4-219ENST00000592604 LRRCC1Q9C099 1032 aa18.09■□□□□ 0.49
SMARCA4-219ENST00000592604 ZKSCAN5Q9Y2L8 839 aa18.09■□□□□ 0.49
SMARCA4-219ENST00000592604 MIS18AQ9NYP9 233 aa18.08■□□□□ 0.49
SMARCA4-219ENST00000592604 TSPYL4Q9UJ04 414 aa18.08■□□□□ 0.49
SMARCA4-219ENST00000592604 EXOC6BQ9Y2D4 811 aa18.08■□□□□ 0.49
SMARCA4-219ENST00000592604 TOPAZ1Q8N9V7 1692 aa18.08■□□□□ 0.48
SMARCA4-219ENST00000592604 CHMLP26374 656 aa18.08■□□□□ 0.48
SMARCA4-219ENST00000592604 STAP2Q9UGK3 403 aa18.08■□□□□ 0.48
SMARCA4-219ENST00000592604 ACEP12821 1306 aa18.07■□□□□ 0.48
SMARCA4-219ENST00000592604 MX1P20591 662 aa18.07■□□□□ 0.48
SMARCA4-219ENST00000592604 HDGFP51858 240 aaKnown RBP18.07■□□□□ 0.48
SMARCA4-219ENST00000592604 EPB41L2O43491 1005 aaKnown RBP18.07■□□□□ 0.48
SMARCA4-219ENST00000592604 ATP8B2P98198 1209 aa18.07■□□□□ 0.48
SMARCA4-219ENST00000592604 GNAI3P08754 354 aa18.06■□□□□ 0.48
SMARCA4-219ENST00000592604 MTHFSDQ2M296 383 aaKnown RBP18.06■□□□□ 0.48
SMARCA4-219ENST00000592604 PALD1Q9ULE6 856 aa18.06■□□□□ 0.48
SMARCA4-219ENST00000592604 USP6P35125 1406 aa18.06■□□□□ 0.48
SMARCA4-219ENST00000592604 MAP3K19Q56UN5 1328 aa18.06■□□□□ 0.48
SMARCA4-219ENST00000592604 RTF1Q92541 710 aaKnown RBP18.06■□□□□ 0.48
SMARCA4-219ENST00000592604 SRCIN1Q9C0H9 1055 aa18.06■□□□□ 0.48
SMARCA4-219ENST00000592604 CACNA1FO60840 1977 aa18.05■□□□□ 0.48
SMARCA4-219ENST00000592604 CCDC39Q9UFE4 941 aa18.05■□□□□ 0.48
SMARCA4-219ENST00000592604 KDRP35968 1356 aa18.05■□□□□ 0.48
SMARCA4-219ENST00000592604 ROBO2Q9HCK4 1378 aa18.05■□□□□ 0.48
SMARCA4-219ENST00000592604 FOXO3O43524 673 aa18.05■□□□□ 0.48
SMARCA4-219ENST00000592604 TSHZ3Q63HK5 1081 aa18.04■□□□□ 0.48
SMARCA4-219ENST00000592604 PAXIP1Q6ZW49 1069 aaPredicted RBP18.04■□□□□ 0.48
SMARCA4-219ENST00000592604 STK31Q9BXU1 1019 aa18.04■□□□□ 0.48
SMARCA4-219ENST00000592604 XRN1Q8IZH2 1706 aaKnown RBP18.04■□□□□ 0.48
SMARCA4-219ENST00000592604 CSPP1Q1MSJ5 1256 aa18.04■□□□□ 0.48
SMARCA4-219ENST00000592604 FOXD4L5Q5VV16 416 aaPredicted RBP18.04■□□□□ 0.48
SMARCA4-219ENST00000592604 FOXD4L4Q8WXT5 416 aaPredicted RBP18.04■□□□□ 0.48
SMARCA4-219ENST00000592604 AOX1Q06278 1338 aa18.04■□□□□ 0.48
SMARCA4-219ENST00000592604 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.04■□□□□ 0.48
SMARCA4-219ENST00000592604 PNMA6EA0A0J9YXQ4 647 aa18.03■□□□□ 0.48
SMARCA4-219ENST00000592604 FMN2Q9NZ56 1722 aa18.03■□□□□ 0.48
SMARCA4-219ENST00000592604 SYAP1Q96A49 352 aaPredicted RBP18.03■□□□□ 0.48
SMARCA4-219ENST00000592604 ANO2Q9NQ90 1003 aa18.03■□□□□ 0.48
SMARCA4-219ENST00000592604 FLIIQ13045 1269 aa18.02■□□□□ 0.48
SMARCA4-219ENST00000592604 R3HCC1Q9Y3T6 440 aaKnown RBP18.02■□□□□ 0.48
SMARCA4-219ENST00000592604 N4BP2Q86UW6 1770 aaPredicted RBP18.02■□□□□ 0.48
SMARCA4-219ENST00000592604 HTATSF1O43719 755 aaKnown RBP18.02■□□□□ 0.48
SMARCA4-219ENST00000592604 XPCQ01831 940 aaPredicted RBP18.02■□□□□ 0.47
SMARCA4-219ENST00000592604 TSPY26PQ9H489 355 aa18.02■□□□□ 0.47
SMARCA4-219ENST00000592604 FAM208AQ9UK61 1670 aaKnown RBP18.01■□□□□ 0.47
SMARCA4-219ENST00000592604 TRIM6-TRIM34B2RNG4 842 aa18.01■□□□□ 0.47
SMARCA4-219ENST00000592604 CCDC30Q5VVM6 783 aa18.01■□□□□ 0.47
SMARCA4-219ENST00000592604 RILPL2Q969X0 211 aa18.01■□□□□ 0.47
SMARCA4-219ENST00000592604 RIMS1Q86UR5 1692 aaKnown RBP18.01■□□□□ 0.47
SMARCA4-219ENST00000592604 SOS1Q07889 1333 aaPredicted RBP18.01■□□□□ 0.47
SMARCA4-219ENST00000592604 LRRC37A3O60309 1634 aa18■□□□□ 0.47
SMARCA4-219ENST00000592604 SBNO1A3KN83 1393 aa18■□□□□ 0.47
SMARCA4-219ENST00000592604 FLT4P35916 1363 aa18■□□□□ 0.47
SMARCA4-219ENST00000592604 IGSF1Q8N6C5 1336 aa17.99■□□□□ 0.47
SMARCA4-219ENST00000592604 FKBP5Q13451 457 aaPredicted RBP17.99■□□□□ 0.47
SMARCA4-219ENST00000592604 TTC21AQ8NDW8 1320 aa17.99■□□□□ 0.47
SMARCA4-219ENST00000592604 WDR33Q9C0J8 1336 aaKnown RBP17.99■□□□□ 0.47
SMARCA4-219ENST00000592604 HSPA4P34932 840 aa17.99■□□□□ 0.47
SMARCA4-219ENST00000592604 UNC5CLQ8IV45 518 aa17.99■□□□□ 0.47
SMARCA4-219ENST00000592604 PXDNLA1KZ92 1463 aa17.99■□□□□ 0.47
SMARCA4-219ENST00000592604 ADAMTS13Q76LX8 1427 aa17.99■□□□□ 0.47
SMARCA4-219ENST00000592604 MLECQ14165 292 aa17.99■□□□□ 0.47
SMARCA4-219ENST00000592604 PHF14O94880 888 aa17.98■□□□□ 0.47
SMARCA4-219ENST00000592604 FAM69CQ0P6D2 419 aa17.98■□□□□ 0.47
SMARCA4-219ENST00000592604 RNF214Q8ND24 703 aa17.98■□□□□ 0.47
SMARCA4-219ENST00000592604 TCHHQ07283 1943 aa17.98■□□□□ 0.47
SMARCA4-219ENST00000592604 TMEM87AQ8NBN3 555 aa17.98■□□□□ 0.47
SMARCA4-219ENST00000592604 MAP7D2Q96T17 732 aa17.98■□□□□ 0.47
SMARCA4-219ENST00000592604 EYA1Q99502 592 aa17.98■□□□□ 0.47
SMARCA4-219ENST00000592604 LRRFIP2Q9Y608 721 aaKnown RBP17.98■□□□□ 0.47
SMARCA4-219ENST00000592604 TMEM2Q9UHN6 1383 aa17.97■□□□□ 0.47
SMARCA4-219ENST00000592604 CEP170BQ9Y4F5 1589 aaPredicted RBP17.97■□□□□ 0.47
SMARCA4-219ENST00000592604 UVSSAQ2YD98 709 aa17.97■□□□□ 0.47
SMARCA4-219ENST00000592604 SSH3Q8TE77 659 aa17.97■□□□□ 0.47
SMARCA4-219ENST00000592604 UPF3BQ9BZI7 483 aaKnown RBP17.97■□□□□ 0.47
SMARCA4-219ENST00000592604 USP44Q9H0E7 712 aa17.97■□□□□ 0.47
SMARCA4-219ENST00000592604 DIP2BQ9P265 1576 aa17.96■□□□□ 0.47
SMARCA4-219ENST00000592604 NOL8Q76FK4 1167 aaKnown RBP17.96■□□□□ 0.47
SMARCA4-219ENST00000592604 USP48Q86UV5 1035 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms