RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 R3HDM1Q15032 1099 aaKnown RBP24.79■■□□□ 1.56
TCF3-216ENST00000592395 ANO8Q9HCE9 1232 aaPredicted RBP24.79■■□□□ 1.56
TCF3-216ENST00000592395 LRRC4BQ9NT99 713 aa24.79■■□□□ 1.56
TCF3-216ENST00000592395 MAP3K5Q99683 1374 aa24.79■■□□□ 1.56
TCF3-216ENST00000592395 MRC1P22897 1456 aa24.78■■□□□ 1.56
TCF3-216ENST00000592395 RNMTO43148 476 aaKnown RBP24.77■■□□□ 1.56
TCF3-216ENST00000592395 PNNQ9H307 717 aaKnown RBP24.77■■□□□ 1.56
TCF3-216ENST00000592395 CCNL1Q9UK58 526 aaPredicted RBP24.77■■□□□ 1.56
TCF3-216ENST00000592395 GNAT3A8MTJ3 354 aa24.76■■□□□ 1.55
TCF3-216ENST00000592395 NEFMP07197 916 aa24.76■■□□□ 1.55
TCF3-216ENST00000592395 LGR6Q9HBX8 967 aa24.76■■□□□ 1.55
TCF3-216ENST00000592395 STK32BQ9NY57 414 aa24.76■■□□□ 1.55
TCF3-216ENST00000592395 ASAP1Q9ULH1 1129 aa24.76■■□□□ 1.55
TCF3-216ENST00000592395 ANP32CO43423 234 aa24.75■■□□□ 1.55
TCF3-216ENST00000592395 SAMD1Q6SPF0 538 aaPredicted RBP24.75■■□□□ 1.55
TCF3-216ENST00000592395 C5P01031 1676 aa24.75■■□□□ 1.55
TCF3-216ENST00000592395 TAF1LQ8IZX4 1826 aa24.75■■□□□ 1.55
TCF3-216ENST00000592395 NFATC2IPQ8NCF5 419 aa24.74■■□□□ 1.55
TCF3-216ENST00000592395 PLEKHF1Q96S99 279 aa24.74■■□□□ 1.55
TCF3-216ENST00000592395 SLC52A2Q9HAB3 445 aa24.74■■□□□ 1.55
TCF3-216ENST00000592395 ATG3Q9NT62 314 aa24.74■■□□□ 1.55
TCF3-216ENST00000592395 HMGB2P26583 209 aaKnown RBP24.73■■□□□ 1.55
TCF3-216ENST00000592395 KCNQ4P56696 695 aa24.73■■□□□ 1.55
TCF3-216ENST00000592395 SLC15A2Q16348 729 aa24.73■■□□□ 1.55
TCF3-216ENST00000592395 ZNF831Q5JPB2 1677 aa24.72■■□□□ 1.55
TCF3-216ENST00000592395 WDR43Q15061 677 aaKnown RBP eCLIP24.71■■□□□ 1.55
TCF3-216ENST00000592395 DLG5Q8TDM6 1919 aa24.71■■□□□ 1.55
TCF3-216ENST00000592395 QSER1Q2KHR3 1735 aa24.7■■□□□ 1.54
TCF3-216ENST00000592395 MAPK8IP3Q9UPT6 1336 aa24.7■■□□□ 1.54
TCF3-216ENST00000592395 LOC102724428A0A0B4J2F2 783 aa24.7■■□□□ 1.54
TCF3-216ENST00000592395 SIK1P57059 783 aa24.7■■□□□ 1.54
TCF3-216ENST00000592395 IL17REQ8NFR9 667 aa24.7■■□□□ 1.54
TCF3-216ENST00000592395 SIPA1L3O60292 1781 aaPredicted RBP24.7■■□□□ 1.54
TCF3-216ENST00000592395 ZNF827Q17R98 1081 aa24.69■■□□□ 1.54
TCF3-216ENST00000592395 AKT1S1Q96B36 256 aa24.69■■□□□ 1.54
TCF3-216ENST00000592395 CASZ1Q86V15 1759 aa24.69■■□□□ 1.54
TCF3-216ENST00000592395 CEMIPQ8WUJ3 1361 aa24.68■■□□□ 1.54
TCF3-216ENST00000592395 HTATSF1O43719 755 aaKnown RBP24.67■■□□□ 1.54
TCF3-216ENST00000592395 RTF1Q92541 710 aaKnown RBP24.67■■□□□ 1.54
TCF3-216ENST00000592395 TUBGCP6Q96RT7 1819 aa24.67■■□□□ 1.54
TCF3-216ENST00000592395 C4BP0C0L5 1744 aa24.66■■□□□ 1.54
TCF3-216ENST00000592395 TEFQ10587 303 aa24.66■■□□□ 1.54
TCF3-216ENST00000592395 ATP6V1AP38606 617 aa24.65■■□□□ 1.54
TCF3-216ENST00000592395 NFE2L2Q16236 605 aa24.65■■□□□ 1.54
TCF3-216ENST00000592395 LRP5O75197 1615 aa24.64■■□□□ 1.54
TCF3-216ENST00000592395 RBM42Q9BTD8 480 aaKnown RBP24.64■■□□□ 1.54
TCF3-216ENST00000592395 ADAMTS8Q9UP79 889 aa24.64■■□□□ 1.54
TCF3-216ENST00000592395 CICQ96RK0 1608 aaPredicted RBP24.64■■□□□ 1.53
TCF3-216ENST00000592395 UBR2Q8IWV8 1755 aa24.63■■□□□ 1.53
TCF3-216ENST00000592395 ATF5Q9Y2D1 282 aaPredicted RBP24.63■■□□□ 1.53
TCF3-216ENST00000592395 COL5A3P25940 1745 aaPredicted RBP24.63■■□□□ 1.53
TCF3-216ENST00000592395 ITPK1Q13572 414 aa24.62■■□□□ 1.53
TCF3-216ENST00000592395 MCM10Q7L590 875 aa24.62■■□□□ 1.53
TCF3-216ENST00000592395 SLC4A9Q96Q91 983 aa24.62■■□□□ 1.53
TCF3-216ENST00000592395 TFCP2L1Q9NZI6 479 aa24.62■■□□□ 1.53
TCF3-216ENST00000592395 PTCD1O75127 700 aaKnown RBP24.61■■□□□ 1.53
TCF3-216ENST00000592395 CCDC184Q52MB2 194 aa24.61■■□□□ 1.53
TCF3-216ENST00000592395 KCPQ6ZWJ8 1503 aa24.61■■□□□ 1.53
TCF3-216ENST00000592395 SLC39A6Q13433 755 aa24.6■■□□□ 1.53
TCF3-216ENST00000592395 CCDC146Q8IYE0 955 aa24.6■■□□□ 1.53
TCF3-216ENST00000592395 LINC00116Q8NCU8 138 aa24.6■■□□□ 1.53
TCF3-216ENST00000592395 RUNDC1Q96C34 613 aa24.6■■□□□ 1.53
TCF3-216ENST00000592395 TJP1Q07157 1748 aa24.6■■□□□ 1.53
TCF3-216ENST00000592395 DCTN1Q14203 1278 aa24.59■■□□□ 1.53
TCF3-216ENST00000592395 PDGFDQ9GZP0 370 aaPredicted RBP24.59■■□□□ 1.53
TCF3-216ENST00000592395 UBR3Q6ZT12 1888 aa24.59■■□□□ 1.53
TCF3-216ENST00000592395 TTC5Q8N0Z6 440 aa24.58■■□□□ 1.53
TCF3-216ENST00000592395 AK7Q96M32 723 aa24.58■■□□□ 1.53
TCF3-216ENST00000592395 MRS2Q9HD23 443 aa24.58■■□□□ 1.53
TCF3-216ENST00000592395 PNPLA7Q6ZV29 1317 aa24.58■■□□□ 1.52
TCF3-216ENST00000592395 TMPOP42166 694 aaKnown RBP24.57■■□□□ 1.52
TCF3-216ENST00000592395 ZNF790Q6PG37 636 aa24.56■■□□□ 1.52
TCF3-216ENST00000592395 BTBD11A6QL63 1104 aa24.55■■□□□ 1.52
TCF3-216ENST00000592395 RIPK4P57078 832 aa24.55■■□□□ 1.52
TCF3-216ENST00000592395 LMOD3Q0VAK6 560 aa24.54■■□□□ 1.52
TCF3-216ENST00000592395 SPON1Q9HCB6 807 aa24.54■■□□□ 1.52
TCF3-216ENST00000592395 CNTNAP4Q9C0A0 1308 aa24.54■■□□□ 1.52
TCF3-216ENST00000592395 RC3H1Q5TC82 1133 aaKnown RBP24.53■■□□□ 1.52
TCF3-216ENST00000592395 VSIG10Q8N0Z9 540 aa24.53■■□□□ 1.52
TCF3-216ENST00000592395 FLAD1Q8NFF5 587 aa24.53■■□□□ 1.52
TCF3-216ENST00000592395 ZBTB7AO95365 584 aa24.52■■□□□ 1.52
TCF3-216ENST00000592395 TAF7Q15545 349 aaPredicted RBP24.52■■□□□ 1.52
TCF3-216ENST00000592395 PNISRQ8TF01 805 aaKnown RBP24.52■■□□□ 1.52
TCF3-216ENST00000592395 SLC16A10Q8TF71 515 aa24.52■■□□□ 1.52
TCF3-216ENST00000592395 MTFR1LQ9H019 292 aa24.52■■□□□ 1.52
TCF3-216ENST00000592395 MYH14Q7Z406 1995 aaKnown RBP24.52■■□□□ 1.52
TCF3-216ENST00000592395 GNPATO15228 680 aa24.51■■□□□ 1.51
TCF3-216ENST00000592395 SSFA2P28290 1259 aa24.51■■□□□ 1.51
TCF3-216ENST00000592395 COL23A1Q86Y22 540 aaPredicted RBP24.51■■□□□ 1.51
TCF3-216ENST00000592395 ZNF496Q96IT1 587 aaPredicted RBP24.51■■□□□ 1.51
TCF3-216ENST00000592395 RRP7AQ9Y3A4 280 aaKnown RBP24.51■■□□□ 1.51
TCF3-216ENST00000592395 KDM3BQ7LBC6 1761 aa24.5■■□□□ 1.51
TCF3-216ENST00000592395 DNAJC10Q8IXB1 793 aa24.5■■□□□ 1.51
TCF3-216ENST00000592395 FMNL2Q96PY5 1086 aa24.5■■□□□ 1.51
TCF3-216ENST00000592395 THUMPD2Q9BTF0 503 aaKnown RBP24.5■■□□□ 1.51
TCF3-216ENST00000592395 HEG1Q9ULI3 1381 aa24.5■■□□□ 1.51
TCF3-216ENST00000592395 NEUROD2Q15784 382 aa24.49■■□□□ 1.51
TCF3-216ENST00000592395 AMIGO3Q86WK7 504 aa24.49■■□□□ 1.51
TCF3-216ENST00000592395 COL24A1Q17RW2 1714 aa24.49■■□□□ 1.51
TCF3-216ENST00000592395 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms