RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 EZH2Q15910 746 aaKnown RBP12.85□□□□□ -0.35
TPM4-215ENST00000592138 SLC27A3Q5K4L6 730 aa12.85□□□□□ -0.35
TPM4-215ENST00000592138 RTF1Q92541 710 aaKnown RBP12.85□□□□□ -0.35
TPM4-215ENST00000592138 LGR6Q9HBX8 967 aa12.85□□□□□ -0.35
TPM4-215ENST00000592138 PALLDQ8WX93 1383 aa12.84□□□□□ -0.35
TPM4-215ENST00000592138 TMPOP42166 694 aaKnown RBP12.84□□□□□ -0.35
TPM4-215ENST00000592138 LMOD3Q0VAK6 560 aa12.84□□□□□ -0.35
TPM4-215ENST00000592138 NCBP3Q53F19 620 aaKnown RBP12.84□□□□□ -0.35
TPM4-215ENST00000592138 IL17REQ8NFR9 667 aa12.84□□□□□ -0.35
TPM4-215ENST00000592138 ITGB4P16144 1822 aa12.83□□□□□ -0.35
TPM4-215ENST00000592138 TXNRD1Q16881 649 aa12.83□□□□□ -0.36
TPM4-215ENST00000592138 PROM2Q8N271 834 aa12.83□□□□□ -0.36
TPM4-215ENST00000592138 NFATC2IPQ8NCF5 419 aa12.83□□□□□ -0.36
TPM4-215ENST00000592138 TEFQ10587 303 aa12.82□□□□□ -0.36
TPM4-215ENST00000592138 CCDC146Q8IYE0 955 aa12.82□□□□□ -0.36
TPM4-215ENST00000592138 ATG3Q9NT62 314 aa12.82□□□□□ -0.36
TPM4-215ENST00000592138 LY75O60449 1722 aa12.82□□□□□ -0.36
TPM4-215ENST00000592138 NUP188Q5SRE5 1749 aa12.82□□□□□ -0.36
TPM4-215ENST00000592138 PAPPAQ13219 1627 aa12.81□□□□□ -0.36
TPM4-215ENST00000592138 ZNF831Q5JPB2 1677 aa12.81□□□□□ -0.36
TPM4-215ENST00000592138 RIPK4P57078 832 aa12.81□□□□□ -0.36
TPM4-215ENST00000592138 ASAP1Q9ULH1 1129 aa12.81□□□□□ -0.36
TPM4-215ENST00000592138 MCM10Q7L590 875 aa12.8□□□□□ -0.36
TPM4-215ENST00000592138 LOC102724428A0A0B4J2F2 783 aa12.79□□□□□ -0.36
TPM4-215ENST00000592138 SIK1P57059 783 aa12.79□□□□□ -0.36
TPM4-215ENST00000592138 R3HDM1Q15032 1099 aaKnown RBP12.79□□□□□ -0.36
TPM4-215ENST00000592138 LRRC4BQ9NT99 713 aa12.79□□□□□ -0.36
TPM4-215ENST00000592138 BABAM1Q9NWV8 329 aa12.79□□□□□ -0.36
TPM4-215ENST00000592138 CCNL1Q9UK58 526 aaPredicted RBP12.79□□□□□ -0.36
TPM4-215ENST00000592138 CICQ96RK0 1608 aaPredicted RBP12.79□□□□□ -0.36
TPM4-215ENST00000592138 SIPA1L3O60292 1781 aaPredicted RBP12.79□□□□□ -0.36
TPM4-215ENST00000592138 APAF1O14727 1248 aa12.78□□□□□ -0.36
TPM4-215ENST00000592138 CCDC27Q2M243 656 aa12.78□□□□□ -0.36
TPM4-215ENST00000592138 NBPF14Q5TI25 921 aa12.78□□□□□ -0.36
TPM4-215ENST00000592138 VSIG10Q8N0Z9 540 aa12.78□□□□□ -0.36
TPM4-215ENST00000592138 NGEFQ8N5V2 710 aa12.78□□□□□ -0.36
TPM4-215ENST00000592138 TRIM35Q9UPQ4 493 aa12.78□□□□□ -0.36
TPM4-215ENST00000592138 KCPQ6ZWJ8 1503 aa12.78□□□□□ -0.36
TPM4-215ENST00000592138 BTBD11A6QL63 1104 aa12.77□□□□□ -0.37
TPM4-215ENST00000592138 YY1P25490 414 aa12.77□□□□□ -0.37
TPM4-215ENST00000592138 DCTN1Q14203 1278 aa12.77□□□□□ -0.37
TPM4-215ENST00000592138 TAF7Q15545 349 aaPredicted RBP12.77□□□□□ -0.37
TPM4-215ENST00000592138 ZNF790Q6PG37 636 aa12.77□□□□□ -0.37
TPM4-215ENST00000592138 MIER1Q8N108 512 aa12.77□□□□□ -0.37
TPM4-215ENST00000592138 CEP350Q5VT06 3117 aa12.76□□□□□ -0.37
TPM4-215ENST00000592138 FAM9BQ8IZU0 186 aa12.76□□□□□ -0.37
TPM4-215ENST00000592138 TTC5Q8N0Z6 440 aa12.76□□□□□ -0.37
TPM4-215ENST00000592138 RRP7AQ9Y3A4 280 aaKnown RBP12.76□□□□□ -0.37
TPM4-215ENST00000592138 UBR2Q8IWV8 1755 aa12.76□□□□□ -0.37
TPM4-215ENST00000592138 VIRMAQ69YN4 1812 aaKnown RBP12.76□□□□□ -0.37
TPM4-215ENST00000592138 DLG5Q8TDM6 1919 aa12.76□□□□□ -0.37
TPM4-215ENST00000592138 C5P01031 1676 aa12.75□□□□□ -0.37
TPM4-215ENST00000592138 ATP6V1AP38606 617 aa12.75□□□□□ -0.37
TPM4-215ENST00000592138 CALD1Q05682 793 aaKnown RBP12.75□□□□□ -0.37
TPM4-215ENST00000592138 NEUROD2Q15784 382 aa12.75□□□□□ -0.37
TPM4-215ENST00000592138 SLC15A2Q16348 729 aa12.75□□□□□ -0.37
TPM4-215ENST00000592138 AKT1S1Q96B36 256 aa12.75□□□□□ -0.37
TPM4-215ENST00000592138 SLC4A9Q96Q91 983 aa12.75□□□□□ -0.37
TPM4-215ENST00000592138 STK32BQ9NY57 414 aa12.75□□□□□ -0.37
TPM4-215ENST00000592138 SLC39A6Q13433 755 aa12.74□□□□□ -0.37
TPM4-215ENST00000592138 FMNL2Q96PY5 1086 aa12.74□□□□□ -0.37
TPM4-215ENST00000592138 RBM42Q9BTD8 480 aaKnown RBP12.74□□□□□ -0.37
TPM4-215ENST00000592138 ANO8Q9HCE9 1232 aaPredicted RBP12.74□□□□□ -0.37
TPM4-215ENST00000592138 GOLGB1Q14789 3259 aaKnown RBP12.73□□□□□ -0.37
TPM4-215ENST00000592138 HEG1Q9ULI3 1381 aa12.73□□□□□ -0.37
TPM4-215ENST00000592138 CNTNAP4Q9C0A0 1308 aa12.73□□□□□ -0.37
TPM4-215ENST00000592138 PTCD1O75127 700 aaKnown RBP12.73□□□□□ -0.37
TPM4-215ENST00000592138 ITPK1Q13572 414 aa12.73□□□□□ -0.37
TPM4-215ENST00000592138 THUMPD2Q9BTF0 503 aaKnown RBP12.73□□□□□ -0.37
TPM4-215ENST00000592138 TEX13AQ9BXU3 409 aaPredicted RBP12.73□□□□□ -0.37
TPM4-215ENST00000592138 C4BP0C0L5 1744 aa12.72□□□□□ -0.37
TPM4-215ENST00000592138 ZNF827Q17R98 1081 aa12.72□□□□□ -0.37
TPM4-215ENST00000592138 RC3H1Q5TC82 1133 aaKnown RBP12.72□□□□□ -0.37
TPM4-215ENST00000592138 LINC00116Q8NCU8 138 aa12.72□□□□□ -0.37
TPM4-215ENST00000592138 ZNF496Q96IT1 587 aaPredicted RBP12.72□□□□□ -0.37
TPM4-215ENST00000592138 CFAP44Q96MT7 982 aa12.72□□□□□ -0.37
TPM4-215ENST00000592138 KAT6BQ8WYB5 2073 aa12.72□□□□□ -0.37
TPM4-215ENST00000592138 KDM3BQ7LBC6 1761 aa12.71□□□□□ -0.37
TPM4-215ENST00000592138 IL16Q14005 1332 aa12.71□□□□□ -0.37
TPM4-215ENST00000592138 CHL1O00533 1208 aa12.71□□□□□ -0.37
TPM4-215ENST00000592138 ZNF853P0CG23 659 aa12.71□□□□□ -0.37
TPM4-215ENST00000592138 KCNQ4P56696 695 aa12.71□□□□□ -0.37
TPM4-215ENST00000592138 WWC1Q8IX03 1113 aa12.71□□□□□ -0.37
TPM4-215ENST00000592138 IFT57Q9NWB7 429 aa12.71□□□□□ -0.37
TPM4-215ENST00000592138 TSPYL4Q9UJ04 414 aa12.71□□□□□ -0.37
TPM4-215ENST00000592138 COL5A3P25940 1745 aaPredicted RBP12.71□□□□□ -0.38
TPM4-215ENST00000592138 TJP1Q07157 1748 aa12.71□□□□□ -0.38
TPM4-215ENST00000592138 QSER1Q2KHR3 1735 aa12.71□□□□□ -0.38
TPM4-215ENST00000592138 TAF1LQ8IZX4 1826 aa12.7□□□□□ -0.38
TPM4-215ENST00000592138 FLAD1Q8NFF5 587 aa12.7□□□□□ -0.38
TPM4-215ENST00000592138 AK7Q96M32 723 aa12.7□□□□□ -0.38
TPM4-215ENST00000592138 CASZ1Q86V15 1759 aa12.7□□□□□ -0.38
TPM4-215ENST00000592138 KCNQ3O43525 872 aa12.69□□□□□ -0.38
TPM4-215ENST00000592138 STARD3NLO95772 234 aa12.69□□□□□ -0.38
TPM4-215ENST00000592138 SNRPA1P09661 255 aaKnown RBP12.69□□□□□ -0.38
TPM4-215ENST00000592138 SSFA2P28290 1259 aa12.69□□□□□ -0.38
TPM4-215ENST00000592138 EIF4A1P60842 406 aaKnown RBP12.69□□□□□ -0.38
TPM4-215ENST00000592138 GNAI1P63096 354 aa12.69□□□□□ -0.38
TPM4-215ENST00000592138 WDR63Q8IWG1 891 aa12.69□□□□□ -0.38
TPM4-215ENST00000592138 TFCP2L1Q9NZI6 479 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms