RNA–Protein interactions for RNA: ENST00000591075.1

NPC1-211, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-211ENST00000591075 C1orf141Q5JVX7 400 aa11.71□□□□□ -0.53
NPC1-211ENST00000591075 CCNL1Q9UK58 526 aaPredicted RBP11.71□□□□□ -0.53
NPC1-211ENST00000591075 CYP27B1O15528 508 aa11.7□□□□□ -0.54
NPC1-211ENST00000591075 CENPBP07199 599 aaPredicted RBP11.7□□□□□ -0.54
NPC1-211ENST00000591075 SULT6B1Q6IMI4 303 aa11.7□□□□□ -0.54
NPC1-211ENST00000591075 SMARCC1Q92922 1105 aaPredicted RBP11.7□□□□□ -0.54
NPC1-211ENST00000591075 ANO8Q9HCE9 1232 aaPredicted RBP11.7□□□□□ -0.54
NPC1-211ENST00000591075 TMOD3Q9NYL9 352 aa11.7□□□□□ -0.54
NPC1-211ENST00000591075 NHSQ6T4R5 1651 aa11.7□□□□□ -0.54
NPC1-211ENST00000591075 IGSF1Q8N6C5 1336 aa11.69□□□□□ -0.54
NPC1-211ENST00000591075 ZNF530Q6P9A1 599 aaPredicted RBP11.69□□□□□ -0.54
NPC1-211ENST00000591075 TFCP2L1Q9NZI6 479 aa11.69□□□□□ -0.54
NPC1-211ENST00000591075 ADAMTS8Q9UP79 889 aa11.69□□□□□ -0.54
NPC1-211ENST00000591075 RREB1Q92766 1687 aa11.68□□□□□ -0.54
NPC1-211ENST00000591075 ZBTB7AO95365 584 aa11.68□□□□□ -0.54
NPC1-211ENST00000591075 RGPD3A6NKT7 1758 aaPredicted RBP11.68□□□□□ -0.54
NPC1-211ENST00000591075 RGPD4Q7Z3J3 1758 aa11.68□□□□□ -0.54
NPC1-211ENST00000591075 NUP188Q5SRE5 1749 aa11.68□□□□□ -0.54
NPC1-211ENST00000591075 U2SURPO15042 1029 aaKnown RBP11.67□□□□□ -0.54
NPC1-211ENST00000591075 U2AF1L5P0DN76 240 aaPredicted RBP11.67□□□□□ -0.54
NPC1-211ENST00000591075 PHKG2P15735 406 aa11.67□□□□□ -0.54
NPC1-211ENST00000591075 IL13P35225 146 aa11.67□□□□□ -0.54
NPC1-211ENST00000591075 U2AF1Q01081 240 aaKnown RBP eCLIP11.67□□□□□ -0.54
NPC1-211ENST00000591075 NKX1-1Q15270 411 aaPredicted RBP11.67□□□□□ -0.54
NPC1-211ENST00000591075 RUNDC1Q96C34 613 aa11.67□□□□□ -0.54
NPC1-211ENST00000591075 ATF5Q9Y2D1 282 aaPredicted RBP11.67□□□□□ -0.54
NPC1-211ENST00000591075 PLEKHG2Q9H7P9 1386 aa11.67□□□□□ -0.54
NPC1-211ENST00000591075 BTAF1O14981 1849 aa11.66□□□□□ -0.54
NPC1-211ENST00000591075 KCNQ4P56696 695 aa11.66□□□□□ -0.54
NPC1-211ENST00000591075 CABP4P57796 275 aa11.66□□□□□ -0.54
NPC1-211ENST00000591075 AEBP1Q8IUX7 1158 aa11.66□□□□□ -0.54
NPC1-211ENST00000591075 DCAF5Q96JK2 942 aa11.66□□□□□ -0.54
NPC1-211ENST00000591075 LRRC4BQ9NT99 713 aa11.66□□□□□ -0.54
NPC1-211ENST00000591075 ZBED9Q6R2W3 1325 aa11.65□□□□□ -0.54
NPC1-211ENST00000591075 COL3A1P02461 1466 aaPredicted RBP11.65□□□□□ -0.54
NPC1-211ENST00000591075 HMOX1P09601 288 aa11.65□□□□□ -0.54
NPC1-211ENST00000591075 HNRNPUQ00839 825 aaKnown RBP eCLIP11.65□□□□□ -0.54
NPC1-211ENST00000591075 POTEGQ6S5H5 508 aa11.65□□□□□ -0.54
NPC1-211ENST00000591075 PIGBQ92521 554 aa11.65□□□□□ -0.54
NPC1-211ENST00000591075 MTFR1LQ9H019 292 aa11.65□□□□□ -0.54
NPC1-211ENST00000591075 NCAPD2Q15021 1401 aa11.65□□□□□ -0.54
NPC1-211ENST00000591075 PALLDQ8WX93 1383 aa11.65□□□□□ -0.55
NPC1-211ENST00000591075 DOT1LQ8TEK3 1739 aa11.64□□□□□ -0.55
NPC1-211ENST00000591075 ERVV-2B6SEH9 535 aa11.64□□□□□ -0.55
NPC1-211ENST00000591075 POLD1P28340 1107 aa11.64□□□□□ -0.55
NPC1-211ENST00000591075 ZNF827Q17R98 1081 aa11.64□□□□□ -0.55
NPC1-211ENST00000591075 AK7Q96M32 723 aa11.64□□□□□ -0.55
NPC1-211ENST00000591075 MAPK8IP3Q9UPT6 1336 aa11.63□□□□□ -0.55
NPC1-211ENST00000591075 CCDC27Q2M243 656 aa11.63□□□□□ -0.55
NPC1-211ENST00000591075 LRP5O75197 1615 aa11.63□□□□□ -0.55
NPC1-211ENST00000591075 FLAD1Q8NFF5 587 aa11.62□□□□□ -0.55
NPC1-211ENST00000591075 SLC16A10Q8TF71 515 aa11.62□□□□□ -0.55
NPC1-211ENST00000591075 PDGFDQ9GZP0 370 aaPredicted RBP11.62□□□□□ -0.55
NPC1-211ENST00000591075 SHANK3Q9BYB0 1731 aa11.61□□□□□ -0.55
NPC1-211ENST00000591075 LOC102724428A0A0B4J2F2 783 aa11.61□□□□□ -0.55
NPC1-211ENST00000591075 ATP6V1AP38606 617 aa11.61□□□□□ -0.55
NPC1-211ENST00000591075 SIK1P57059 783 aa11.61□□□□□ -0.55
NPC1-211ENST00000591075 LMOD3Q0VAK6 560 aa11.61□□□□□ -0.55
NPC1-211ENST00000591075 AKAP4Q5JQC9 854 aa11.61□□□□□ -0.55
NPC1-211ENST00000591075 KLHL34Q8N239 644 aa11.61□□□□□ -0.55
NPC1-211ENST00000591075 ASAP1Q9ULH1 1129 aa11.61□□□□□ -0.55
NPC1-211ENST00000591075 PKD1L3Q7Z443 1732 aa11.6□□□□□ -0.55
NPC1-211ENST00000591075 KDRP35968 1356 aa11.6□□□□□ -0.55
NPC1-211ENST00000591075 CALD1Q05682 793 aaKnown RBP11.6□□□□□ -0.55
NPC1-211ENST00000591075 OTUD5Q96G74 571 aa11.6□□□□□ -0.55
NPC1-211ENST00000591075 YTHDC1Q96MU7 727 aaKnown RBP11.6□□□□□ -0.55
NPC1-211ENST00000591075 PLEKHF1Q96S99 279 aa11.6□□□□□ -0.55
NPC1-211ENST00000591075 HTATSF1O43719 755 aaKnown RBP11.59□□□□□ -0.55
NPC1-211ENST00000591075 WDR63Q8IWG1 891 aa11.59□□□□□ -0.55
NPC1-211ENST00000591075 GAS2L2Q8NHY3 880 aa11.59□□□□□ -0.55
NPC1-211ENST00000591075 ARXQ96QS3 562 aa11.59□□□□□ -0.55
NPC1-211ENST00000591075 RSPH6AQ9H0K4 717 aa11.59□□□□□ -0.55
NPC1-211ENST00000591075 ATG3Q9NT62 314 aa11.59□□□□□ -0.55
NPC1-211ENST00000591075 PNPLA7Q6ZV29 1317 aa11.59□□□□□ -0.55
NPC1-211ENST00000591075 PHF14O94880 888 aa11.58□□□□□ -0.56
NPC1-211ENST00000591075 NFATC2IPQ8NCF5 419 aa11.58□□□□□ -0.56
NPC1-211ENST00000591075 APAF1O14727 1248 aa11.57□□□□□ -0.56
NPC1-211ENST00000591075 GNPATO15228 680 aa11.57□□□□□ -0.56
NPC1-211ENST00000591075 PTCD1O75127 700 aaKnown RBP11.57□□□□□ -0.56
NPC1-211ENST00000591075 PRKAR2BP31323 418 aa11.57□□□□□ -0.56
NPC1-211ENST00000591075 MTHFSDQ2M296 383 aaKnown RBP11.57□□□□□ -0.56
NPC1-211ENST00000591075 COL23A1Q86Y22 540 aaPredicted RBP11.57□□□□□ -0.56
NPC1-211ENST00000591075 RNMTO43148 476 aaKnown RBP11.56□□□□□ -0.56
NPC1-211ENST00000591075 TMPOP42166 694 aaKnown RBP11.56□□□□□ -0.56
NPC1-211ENST00000591075 PTGER2P43116 358 aa11.56□□□□□ -0.56
NPC1-211ENST00000591075 TEFQ10587 303 aa11.56□□□□□ -0.56
NPC1-211ENST00000591075 NFE2L2Q16236 605 aa11.56□□□□□ -0.56
NPC1-211ENST00000591075 SLC52A2Q9HAB3 445 aa11.56□□□□□ -0.56
NPC1-211ENST00000591075 IL16Q14005 1332 aa11.56□□□□□ -0.56
NPC1-211ENST00000591075 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.55□□□□□ -0.56
NPC1-211ENST00000591075 GNAT3A8MTJ3 354 aa11.55□□□□□ -0.56
NPC1-211ENST00000591075 GOLGA2Q08379 1002 aa11.55□□□□□ -0.56
NPC1-211ENST00000591075 MSL1Q68DK7 614 aa11.55□□□□□ -0.56
NPC1-211ENST00000591075 TTC5Q8N0Z6 440 aa11.55□□□□□ -0.56
NPC1-211ENST00000591075 LINC00116Q8NCU8 138 aa11.55□□□□□ -0.56
NPC1-211ENST00000591075 RTF1Q92541 710 aaKnown RBP11.55□□□□□ -0.56
NPC1-211ENST00000591075 FHDC1Q9C0D6 1143 aaPredicted RBP11.55□□□□□ -0.56
NPC1-211ENST00000591075 LGR6Q9HBX8 967 aa11.55□□□□□ -0.56
NPC1-211ENST00000591075 RTCBQ9Y3I0 505 aaKnown RBP11.55□□□□□ -0.56
NPC1-211ENST00000591075 ITGB4P16144 1822 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms