RNA–Protein interactions for RNA: ENST00000590605.2

TCF3-214, Transcript of transcription factor 3, humanhuman

TSL 2

Gene TCF3, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-214ENST00000590605 IFT57Q9NWB7 429 aa20.58■□□□□ 0.89
TCF3-214ENST00000590605 ADAMTS7Q9UKP4 1686 aa20.58■□□□□ 0.88
TCF3-214ENST00000590605 E9PSI1 815 aa20.57■□□□□ 0.88
TCF3-214ENST00000590605 CABP4P57796 275 aa20.57■□□□□ 0.88
TCF3-214ENST00000590605 DCTN1Q14203 1278 aa20.57■□□□□ 0.88
TCF3-214ENST00000590605 MYH16Q9H6N6 1097 aa20.56■□□□□ 0.88
TCF3-214ENST00000590605 DLG5Q8TDM6 1919 aa20.56■□□□□ 0.88
TCF3-214ENST00000590605 ZNF853P0CG23 659 aa20.55■□□□□ 0.88
TCF3-214ENST00000590605 MRC1P22897 1456 aa20.55■□□□□ 0.88
TCF3-214ENST00000590605 SENP3-EIF4A1A0A087X0R7 540 aa20.54■□□□□ 0.88
TCF3-214ENST00000590605 CHL1O00533 1208 aa20.54■□□□□ 0.88
TCF3-214ENST00000590605 EZH2Q15910 746 aaKnown RBP20.54■□□□□ 0.88
TCF3-214ENST00000590605 TMOD3Q9NYL9 352 aa20.54■□□□□ 0.88
TCF3-214ENST00000590605 NFATC2IPQ8NCF5 419 aa20.53■□□□□ 0.88
TCF3-214ENST00000590605 THUMPD2Q9BTF0 503 aaKnown RBP20.53■□□□□ 0.88
TCF3-214ENST00000590605 SCN11AQ9UI33 1791 aa20.52■□□□□ 0.88
TCF3-214ENST00000590605 BTBD11A6QL63 1104 aa20.52■□□□□ 0.88
TCF3-214ENST00000590605 APBA3O96018 575 aa20.52■□□□□ 0.88
TCF3-214ENST00000590605 SLFN5Q08AF3 891 aa20.52■□□□□ 0.88
TCF3-214ENST00000590605 RREB1Q92766 1687 aa20.51■□□□□ 0.87
TCF3-214ENST00000590605 TRMT2AQ8IZ69 625 aaKnown RBP20.51■□□□□ 0.87
TCF3-214ENST00000590605 CAMKK2Q96RR4 588 aa20.51■□□□□ 0.87
TCF3-214ENST00000590605 PRIM1P49642 420 aaKnown RBP20.5■□□□□ 0.87
TCF3-214ENST00000590605 TSPYL4Q9UJ04 414 aa20.5■□□□□ 0.87
TCF3-214ENST00000590605 R3HDM1Q15032 1099 aaKnown RBP20.49■□□□□ 0.87
TCF3-214ENST00000590605 NUP188Q5SRE5 1749 aa20.49■□□□□ 0.87
TCF3-214ENST00000590605 PIGBQ92521 554 aa20.48■□□□□ 0.87
TCF3-214ENST00000590605 BCL11BQ9C0K0 894 aaPredicted RBP20.48■□□□□ 0.87
TCF3-214ENST00000590605 LAS1LQ9Y4W2 734 aaKnown RBP20.48■□□□□ 0.87
TCF3-214ENST00000590605 ZNF790Q6PG37 636 aa20.47■□□□□ 0.87
TCF3-214ENST00000590605 TTC5Q8N0Z6 440 aa20.47■□□□□ 0.87
TCF3-214ENST00000590605 SMARCC1Q92922 1105 aaPredicted RBP20.47■□□□□ 0.87
TCF3-214ENST00000590605 SYTL4Q96C24 671 aaPredicted RBP20.47■□□□□ 0.87
TCF3-214ENST00000590605 MBIPQ9NS73 344 aa20.47■□□□□ 0.87
TCF3-214ENST00000590605 SBF2Q86WG5 1849 aa20.47■□□□□ 0.87
TCF3-214ENST00000590605 SOS1Q07889 1333 aaPredicted RBP20.47■□□□□ 0.87
TCF3-214ENST00000590605 CDCA7LQ96GN5 454 aa20.46■□□□□ 0.87
TCF3-214ENST00000590605 ACSBG1Q96GR2 724 aa20.46■□□□□ 0.87
TCF3-214ENST00000590605 CHMP4AQ9BY43 222 aa20.46■□□□□ 0.87
TCF3-214ENST00000590605 SPINK5Q9NQ38 1064 aaPredicted RBP20.46■□□□□ 0.87
TCF3-214ENST00000590605 CT47B1P0C2W7 299 aaPredicted RBP20.45■□□□□ 0.86
TCF3-214ENST00000590605 DUSP27Q5VZP5 1158 aa20.45■□□□□ 0.86
TCF3-214ENST00000590605 FANCIQ9NVI1 1328 aa20.45■□□□□ 0.86
TCF3-214ENST00000590605 HMGB2P26583 209 aaKnown RBP20.44■□□□□ 0.86
TCF3-214ENST00000590605 MIS18AQ9NYP9 233 aa20.43■□□□□ 0.86
TCF3-214ENST00000590605 TOGARAM1Q9Y4F4 1720 aa20.43■□□□□ 0.86
TCF3-214ENST00000590605 SIPA1L3O60292 1781 aaPredicted RBP20.43■□□□□ 0.86
TCF3-214ENST00000590605 KCNQ2O43526 872 aa20.42■□□□□ 0.86
TCF3-214ENST00000590605 HOXB7P09629 217 aa20.42■□□□□ 0.86
TCF3-214ENST00000590605 EIF4A1P60842 406 aaKnown RBP20.42■□□□□ 0.86
TCF3-214ENST00000590605 FMNL2Q96PY5 1086 aa20.42■□□□□ 0.86
TCF3-214ENST00000590605 ATG3Q9NT62 314 aa20.42■□□□□ 0.86
TCF3-214ENST00000590605 DOT1LQ8TEK3 1739 aa20.41■□□□□ 0.86
TCF3-214ENST00000590605 RGPD3A6NKT7 1758 aaPredicted RBP20.41■□□□□ 0.86
TCF3-214ENST00000590605 RGPD4Q7Z3J3 1758 aa20.41■□□□□ 0.86
TCF3-214ENST00000590605 VSIG10Q8N0Z9 540 aa20.41■□□□□ 0.86
TCF3-214ENST00000590605 TSR2Q969E8 191 aaKnown RBP20.41■□□□□ 0.86
TCF3-214ENST00000590605 ZNF428Q96B54 188 aa20.41■□□□□ 0.86
TCF3-214ENST00000590605 NHSQ6T4R5 1651 aa20.41■□□□□ 0.86
TCF3-214ENST00000590605 VIRMAQ69YN4 1812 aaKnown RBP20.41■□□□□ 0.86
TCF3-214ENST00000590605 NBPF14Q5TI25 921 aa20.4■□□□□ 0.86
TCF3-214ENST00000590605 HEG1Q9ULI3 1381 aa20.39■□□□□ 0.85
TCF3-214ENST00000590605 SLC39A6Q13433 755 aa20.39■□□□□ 0.85
TCF3-214ENST00000590605 TEX13AQ9BXU3 409 aaPredicted RBP20.39■□□□□ 0.85
TCF3-214ENST00000590605 ASAP1Q9ULH1 1129 aa20.39■□□□□ 0.85
TCF3-214ENST00000590605 ITGB4P16144 1822 aa20.39■□□□□ 0.85
TCF3-214ENST00000590605 SNRPA1P09661 255 aaKnown RBP20.37■□□□□ 0.85
TCF3-214ENST00000590605 EXOSC9Q06265 439 aaKnown RBP20.37■□□□□ 0.85
TCF3-214ENST00000590605 KDM3BQ7LBC6 1761 aa20.36■□□□□ 0.85
TCF3-214ENST00000590605 PLSCR1O15162 318 aa20.36■□□□□ 0.85
TCF3-214ENST00000590605 KCNQ3O43525 872 aa20.36■□□□□ 0.85
TCF3-214ENST00000590605 ZNF496Q96IT1 587 aaPredicted RBP20.36■□□□□ 0.85
TCF3-214ENST00000590605 KAT6BQ8WYB5 2073 aa20.36■□□□□ 0.85
TCF3-214ENST00000590605 PALLDQ8WX93 1383 aa20.35■□□□□ 0.85
TCF3-214ENST00000590605 PAPPAQ13219 1627 aa20.35■□□□□ 0.85
TCF3-214ENST00000590605 GIGYF1O75420 1035 aaPredicted RBP20.35■□□□□ 0.85
TCF3-214ENST00000590605 CENPBP07199 599 aaPredicted RBP20.35■□□□□ 0.85
TCF3-214ENST00000590605 TWISTNBQ3B726 338 aaPredicted RBP20.35■□□□□ 0.85
TCF3-214ENST00000590605 C8orf58Q8NAV2 365 aa20.34■□□□□ 0.85
TCF3-214ENST00000590605 LOC102724428A0A0B4J2F2 783 aa20.33■□□□□ 0.85
TCF3-214ENST00000590605 PTCD1O75127 700 aaKnown RBP20.33■□□□□ 0.85
TCF3-214ENST00000590605 SIK1P57059 783 aa20.33■□□□□ 0.85
TCF3-214ENST00000590605 KCPQ6ZWJ8 1503 aa20.32■□□□□ 0.84
TCF3-214ENST00000590605 VAMP4O75379 141 aa20.32■□□□□ 0.84
TCF3-214ENST00000590605 SLC27A3Q5K4L6 730 aa20.32■□□□□ 0.84
TCF3-214ENST00000590605 PTF1AQ7RTS3 328 aa20.32■□□□□ 0.84
TCF3-214ENST00000590605 RBM42Q9BTD8 480 aaKnown RBP20.32■□□□□ 0.84
TCF3-214ENST00000590605 STARD3NLO95772 234 aa20.31■□□□□ 0.84
TCF3-214ENST00000590605 UBR2Q8IWV8 1755 aa20.31■□□□□ 0.84
TCF3-214ENST00000590605 ALDH1L2Q3SY69 923 aa20.3■□□□□ 0.84
TCF3-214ENST00000590605 CCDC30Q5VVM6 783 aa20.3■□□□□ 0.84
TCF3-214ENST00000590605 TSPYL6Q8N831 410 aa20.3■□□□□ 0.84
TCF3-214ENST00000590605 BTAF1O14981 1849 aa20.3■□□□□ 0.84
TCF3-214ENST00000590605 ERBB4Q15303 1308 aa20.29■□□□□ 0.84
TCF3-214ENST00000590605 ATP6V1AP38606 617 aa20.29■□□□□ 0.84
TCF3-214ENST00000590605 ELL2O00472 640 aaPredicted RBP20.28■□□□□ 0.84
TCF3-214ENST00000590605 KRT24Q2M2I5 525 aa20.28■□□□□ 0.84
TCF3-214ENST00000590605 ZNF831Q5JPB2 1677 aa20.28■□□□□ 0.84
TCF3-214ENST00000590605 HDGFL1Q5TGJ6 251 aa20.27■□□□□ 0.84
TCF3-214ENST00000590605 CCNL1Q9UK58 526 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms