RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 SSFA2P28290 1259 aa17.59■□□□□ 0.41
RETREG3-208ENST00000589797 CEBPZQ03701 1054 aaKnown RBP17.59■□□□□ 0.41
RETREG3-208ENST00000589797 KIF1BPQ96EK5 621 aa17.59■□□□□ 0.41
RETREG3-208ENST00000589797 KCNQ3O43525 872 aa17.59■□□□□ 0.41
RETREG3-208ENST00000589797 RNF20Q5VTR2 975 aa17.59■□□□□ 0.41
RETREG3-208ENST00000589797 CLTCL1P53675 1640 aa17.59■□□□□ 0.41
RETREG3-208ENST00000589797 A0A087WZG4 1122 aa17.59■□□□□ 0.41
RETREG3-208ENST00000589797 CEP85Q6P2H3 762 aa17.59■□□□□ 0.41
RETREG3-208ENST00000589797 GPTP24298 496 aa17.58■□□□□ 0.41
RETREG3-208ENST00000589797 COPS6Q7L5N1 327 aa17.58■□□□□ 0.41
RETREG3-208ENST00000589797 ROBO2Q9HCK4 1378 aa17.58■□□□□ 0.41
RETREG3-208ENST00000589797 CHL1O00533 1208 aa17.58■□□□□ 0.4
RETREG3-208ENST00000589797 SKOR2Q2VWA4 1001 aaPredicted RBP17.58■□□□□ 0.4
RETREG3-208ENST00000589797 JAKMIP1Q96N16 626 aaKnown RBP17.58■□□□□ 0.4
RETREG3-208ENST00000589797 CHMP4CQ96CF2 233 aa17.57■□□□□ 0.4
RETREG3-208ENST00000589797 TTC22Q5TAA0 569 aa17.57■□□□□ 0.4
RETREG3-208ENST00000589797 PTMSP20962 102 aa17.57■□□□□ 0.4
RETREG3-208ENST00000589797 FERMT3Q86UX7 667 aa17.57■□□□□ 0.4
RETREG3-208ENST00000589797 EDC4Q6P2E9 1401 aaKnown RBP17.56■□□□□ 0.4
RETREG3-208ENST00000589797 PDE1AP54750 535 aa17.56■□□□□ 0.4
RETREG3-208ENST00000589797 PRPF40BQ6NWY9 871 aaKnown RBP17.56■□□□□ 0.4
RETREG3-208ENST00000589797 GDPD2Q9HCC8 539 aa17.56■□□□□ 0.4
RETREG3-208ENST00000589797 TCEANC2Q96MN5 208 aa17.56■□□□□ 0.4
RETREG3-208ENST00000589797 XAGE3Q8WTP9 111 aa17.56■□□□□ 0.4
RETREG3-208ENST00000589797 CNNM1Q9NRU3 951 aa17.56■□□□□ 0.4
RETREG3-208ENST00000589797 VPS37DQ86XT2 251 aa17.55■□□□□ 0.4
RETREG3-208ENST00000589797 BICDL1Q6ZP65 573 aa17.55■□□□□ 0.4
RETREG3-208ENST00000589797 PLEKHM2Q8IWE5 1019 aa17.55■□□□□ 0.4
RETREG3-208ENST00000589797 LARP1Q6PKG0 1096 aaKnown RBP17.55■□□□□ 0.4
RETREG3-208ENST00000589797 DCTPP1Q9H773 170 aa17.55■□□□□ 0.4
RETREG3-208ENST00000589797 PLEKHG3A1L390 1219 aa17.54■□□□□ 0.4
RETREG3-208ENST00000589797 CPLX1O14810 134 aa17.54■□□□□ 0.4
RETREG3-208ENST00000589797 CASTP20810 708 aaKnown RBP17.54■□□□□ 0.4
RETREG3-208ENST00000589797 IL17REQ8NFR9 667 aa17.54■□□□□ 0.4
RETREG3-208ENST00000589797 TNPO1Q92973 898 aaKnown RBP17.54■□□□□ 0.4
RETREG3-208ENST00000589797 SNRKQ9NRH2 765 aa17.54■□□□□ 0.4
RETREG3-208ENST00000589797 MTMR7Q9Y216 660 aa17.54■□□□□ 0.4
RETREG3-208ENST00000589797 KLHDC4Q8TBB5 520 aa17.54■□□□□ 0.4
RETREG3-208ENST00000589797 RHPN1Q8TCX5 695 aa17.54■□□□□ 0.4
RETREG3-208ENST00000589797 BICD2Q8TD16 824 aa17.54■□□□□ 0.4
RETREG3-208ENST00000589797 CCDC57Q2TAC2 916 aa17.53■□□□□ 0.4
RETREG3-208ENST00000589797 IFNL2Q8IZJ0 200 aa17.53■□□□□ 0.4
RETREG3-208ENST00000589797 PNMA6EA0A0J9YXQ4 647 aa17.53■□□□□ 0.4
RETREG3-208ENST00000589797 C19orf44Q9H6X5 657 aa17.53■□□□□ 0.4
RETREG3-208ENST00000589797 ERC1Q8IUD2 1116 aa17.53■□□□□ 0.4
RETREG3-208ENST00000589797 IP6K1Q92551 441 aa17.53■□□□□ 0.4
RETREG3-208ENST00000589797 IQGAP3Q86VI3 1631 aa17.53■□□□□ 0.4
RETREG3-208ENST00000589797 KIF6Q6ZMV9 814 aa17.53■□□□□ 0.4
RETREG3-208ENST00000589797 CADPS2Q86UW7 1296 aa17.53■□□□□ 0.4
RETREG3-208ENST00000589797 CREBRFQ8IUR6 639 aa17.53■□□□□ 0.4
RETREG3-208ENST00000589797 KDM5AP29375 1690 aaKnown RBP17.52■□□□□ 0.4
RETREG3-208ENST00000589797 TRPM1Q7Z4N2 1603 aa17.52■□□□□ 0.4
RETREG3-208ENST00000589797 MSH6P52701 1360 aa17.52■□□□□ 0.39
RETREG3-208ENST00000589797 ATP6V1DQ9Y5K8 247 aa17.52■□□□□ 0.39
RETREG3-208ENST00000589797 NBPF7P0C2Y1 421 aaPredicted RBP17.51■□□□□ 0.39
RETREG3-208ENST00000589797 BCL11BQ9C0K0 894 aaPredicted RBP17.51■□□□□ 0.39
RETREG3-208ENST00000589797 CYP46A1Q9Y6A2 500 aa17.51■□□□□ 0.39
RETREG3-208ENST00000589797 ABCC3O15438 1527 aa17.51■□□□□ 0.39
RETREG3-208ENST00000589797 ANKRD13DQ6ZTN6 518 aa17.51■□□□□ 0.39
RETREG3-208ENST00000589797 CEP126Q9P2H0 1117 aa17.51■□□□□ 0.39
RETREG3-208ENST00000589797 GLRX3O76003 335 aaKnown RBP17.51■□□□□ 0.39
RETREG3-208ENST00000589797 DDX11Q96FC9 970 aa17.51■□□□□ 0.39
RETREG3-208ENST00000589797 ZFYVE9O95405 1425 aa17.51■□□□□ 0.39
RETREG3-208ENST00000589797 RRP12Q5JTH9 1297 aaKnown RBP17.5■□□□□ 0.39
RETREG3-208ENST00000589797 CCDC83Q8IWF9 413 aa17.5■□□□□ 0.39
RETREG3-208ENST00000589797 TMOD3Q9NYL9 352 aa17.5■□□□□ 0.39
RETREG3-208ENST00000589797 INSRP06213 1382 aa17.5■□□□□ 0.39
RETREG3-208ENST00000589797 ATP2B1P20020 1258 aa17.5■□□□□ 0.39
RETREG3-208ENST00000589797 TRDNQ13061 729 aa17.5■□□□□ 0.39
RETREG3-208ENST00000589797 AKAP4Q5JQC9 854 aa17.5■□□□□ 0.39
RETREG3-208ENST00000589797 FMNL2Q96PY5 1086 aa17.5■□□□□ 0.39
RETREG3-208ENST00000589797 HYPKQ9NX55 129 aa17.5■□□□□ 0.39
RETREG3-208ENST00000589797 USP19O94966 1318 aa17.49■□□□□ 0.39
RETREG3-208ENST00000589797 NASPP49321 788 aaPredicted RBP17.49■□□□□ 0.39
RETREG3-208ENST00000589797 NFXL1Q6ZNB6 911 aa17.49■□□□□ 0.39
RETREG3-208ENST00000589797 MYOM2P54296 1465 aa17.49■□□□□ 0.39
RETREG3-208ENST00000589797 PLXNC1O60486 1568 aa17.49■□□□□ 0.39
RETREG3-208ENST00000589797 ATP8B2P98198 1209 aa17.49■□□□□ 0.39
RETREG3-208ENST00000589797 KIAA2012Q0VF49 1180 aa17.49■□□□□ 0.39
RETREG3-208ENST00000589797 RALYLQ86SE5 291 aaKnown RBP17.49■□□□□ 0.39
RETREG3-208ENST00000589797 EFCAB6Q5THR3 1501 aa17.49■□□□□ 0.39
RETREG3-208ENST00000589797 PIK3R4Q99570 1358 aa17.48■□□□□ 0.39
RETREG3-208ENST00000589797 CROCC2H7BZ55 1655 aa17.48■□□□□ 0.39
RETREG3-208ENST00000589797 TTC39AQ5SRH9 613 aa17.47■□□□□ 0.39
RETREG3-208ENST00000589797 BLOC1S2Q6QNY1 142 aa17.47■□□□□ 0.39
RETREG3-208ENST00000589797 PDRG1Q9NUG6 133 aa17.47■□□□□ 0.39
RETREG3-208ENST00000589797 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.47■□□□□ 0.39
RETREG3-208ENST00000589797 SETD1BQ9UPS6 1966 aaKnown RBP17.47■□□□□ 0.39
RETREG3-208ENST00000589797 E9PCH4 1651 aa17.47■□□□□ 0.39
RETREG3-208ENST00000589797 KIF1BO60333 1816 aa17.47■□□□□ 0.39
RETREG3-208ENST00000589797 HTATSF1O43719 755 aaKnown RBP17.46■□□□□ 0.39
RETREG3-208ENST00000589797 IDH1O75874 414 aaKnown RBP17.46■□□□□ 0.39
RETREG3-208ENST00000589797 CPA1P15085 419 aa17.46■□□□□ 0.39
RETREG3-208ENST00000589797 ECHDC1Q9NTX5 307 aa17.46■□□□□ 0.39
RETREG3-208ENST00000589797 MAP3K5Q99683 1374 aa17.46■□□□□ 0.39
RETREG3-208ENST00000589797 MEX3CQ5U5Q3 659 aaKnown RBP17.46■□□□□ 0.39
RETREG3-208ENST00000589797 LARP1BQ659C4 914 aaKnown RBP17.46■□□□□ 0.39
RETREG3-208ENST00000589797 DDX46Q7L014 1031 aaKnown RBP17.46■□□□□ 0.39
RETREG3-208ENST00000589797 RNMTO43148 476 aaKnown RBP17.46■□□□□ 0.39
RETREG3-208ENST00000589797 MRE11P49959 708 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms