RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 SIPA1L3O60292 1781 aaPredicted RBP19.82■□□□□ 0.76
ATG4D-211ENST00000589753 NHSQ6T4R5 1651 aa19.81■□□□□ 0.76
ATG4D-211ENST00000589753 IL16Q14005 1332 aa19.81■□□□□ 0.76
ATG4D-211ENST00000589753 LAS1LQ9Y4W2 734 aaKnown RBP19.81■□□□□ 0.76
ATG4D-211ENST00000589753 SBF2Q86WG5 1849 aa19.81■□□□□ 0.76
ATG4D-211ENST00000589753 KCNQ2O43526 872 aa19.8■□□□□ 0.76
ATG4D-211ENST00000589753 GNAI1P63096 354 aa19.8■□□□□ 0.76
ATG4D-211ENST00000589753 GOLGA2Q08379 1002 aa19.8■□□□□ 0.76
ATG4D-211ENST00000589753 PIGBQ92521 554 aa19.8■□□□□ 0.76
ATG4D-211ENST00000589753 CFAP44Q96MT7 982 aa19.8■□□□□ 0.76
ATG4D-211ENST00000589753 IFT57Q9NWB7 429 aa19.8■□□□□ 0.76
ATG4D-211ENST00000589753 BTBD11A6QL63 1104 aa19.79■□□□□ 0.76
ATG4D-211ENST00000589753 ZNF853P0CG23 659 aa19.78■□□□□ 0.76
ATG4D-211ENST00000589753 BABAM1Q9NWV8 329 aa19.78■□□□□ 0.76
ATG4D-211ENST00000589753 MIS18AQ9NYP9 233 aa19.78■□□□□ 0.76
ATG4D-211ENST00000589753 CHL1O00533 1208 aa19.77■□□□□ 0.76
ATG4D-211ENST00000589753 BCL11BQ9C0K0 894 aaPredicted RBP19.77■□□□□ 0.76
ATG4D-211ENST00000589753 TSPYL4Q9UJ04 414 aa19.77■□□□□ 0.76
ATG4D-211ENST00000589753 KAT6BQ8WYB5 2073 aa19.76■□□□□ 0.75
ATG4D-211ENST00000589753 E9PSI1 815 aa19.76■□□□□ 0.75
ATG4D-211ENST00000589753 TRIM37O94972 964 aa19.76■□□□□ 0.75
ATG4D-211ENST00000589753 SPINK5Q9NQ38 1064 aaPredicted RBP19.76■□□□□ 0.75
ATG4D-211ENST00000589753 SLFN5Q08AF3 891 aa19.75■□□□□ 0.75
ATG4D-211ENST00000589753 PTF1AQ7RTS3 328 aa19.75■□□□□ 0.75
ATG4D-211ENST00000589753 CDCA7LQ96GN5 454 aa19.75■□□□□ 0.75
ATG4D-211ENST00000589753 MYH16Q9H6N6 1097 aa19.75■□□□□ 0.75
ATG4D-211ENST00000589753 MBIPQ9NS73 344 aa19.75■□□□□ 0.75
ATG4D-211ENST00000589753 PAPPAQ13219 1627 aa19.75■□□□□ 0.75
ATG4D-211ENST00000589753 KDM3BQ7LBC6 1761 aa19.75■□□□□ 0.75
ATG4D-211ENST00000589753 SLC39A6Q13433 755 aa19.74■□□□□ 0.75
ATG4D-211ENST00000589753 ZNF790Q6PG37 636 aa19.74■□□□□ 0.75
ATG4D-211ENST00000589753 TTC5Q8N0Z6 440 aa19.74■□□□□ 0.75
ATG4D-211ENST00000589753 BTAF1O14981 1849 aa19.74■□□□□ 0.75
ATG4D-211ENST00000589753 TSR2Q969E8 191 aaKnown RBP19.73■□□□□ 0.75
ATG4D-211ENST00000589753 ATG3Q9NT62 314 aa19.73■□□□□ 0.75
ATG4D-211ENST00000589753 ASAP1Q9ULH1 1129 aa19.73■□□□□ 0.75
ATG4D-211ENST00000589753 FANCIQ9NVI1 1328 aa19.73■□□□□ 0.75
ATG4D-211ENST00000589753 KCNQ3O43525 872 aa19.72■□□□□ 0.75
ATG4D-211ENST00000589753 SMARCC1Q92922 1105 aaPredicted RBP19.71■□□□□ 0.75
ATG4D-211ENST00000589753 TRMT2AQ8IZ69 625 aaKnown RBP19.7■□□□□ 0.74
ATG4D-211ENST00000589753 PALLDQ8WX93 1383 aa19.7■□□□□ 0.74
ATG4D-211ENST00000589753 EIF4A1P60842 406 aaKnown RBP19.69■□□□□ 0.74
ATG4D-211ENST00000589753 KCPQ6ZWJ8 1503 aa19.69■□□□□ 0.74
ATG4D-211ENST00000589753 UBR2Q8IWV8 1755 aa19.69■□□□□ 0.74
ATG4D-211ENST00000589753 TNS1Q9HBL0 1735 aaKnown RBP19.68■□□□□ 0.74
ATG4D-211ENST00000589753 PTCD1O75127 700 aaKnown RBP19.68■□□□□ 0.74
ATG4D-211ENST00000589753 DUSP27Q5VZP5 1158 aa19.68■□□□□ 0.74
ATG4D-211ENST00000589753 ZNF496Q96IT1 587 aaPredicted RBP19.68■□□□□ 0.74
ATG4D-211ENST00000589753 FMNL2Q96PY5 1086 aa19.68■□□□□ 0.74
ATG4D-211ENST00000589753 APBA3O96018 575 aa19.67■□□□□ 0.74
ATG4D-211ENST00000589753 RBM42Q9BTD8 480 aaKnown RBP19.67■□□□□ 0.74
ATG4D-211ENST00000589753 SF3B2Q13435 895 aaKnown RBP19.66■□□□□ 0.74
ATG4D-211ENST00000589753 EXOSC9Q06265 439 aaKnown RBP19.65■□□□□ 0.74
ATG4D-211ENST00000589753 HEG1Q9ULI3 1381 aa19.65■□□□□ 0.74
ATG4D-211ENST00000589753 LOC102724428A0A0B4J2F2 783 aa19.64■□□□□ 0.73
ATG4D-211ENST00000589753 PLSCR1O15162 318 aa19.64■□□□□ 0.73
ATG4D-211ENST00000589753 SIK1P57059 783 aa19.64■□□□□ 0.73
ATG4D-211ENST00000589753 KRT24Q2M2I5 525 aa19.64■□□□□ 0.73
ATG4D-211ENST00000589753 CCDC125Q86Z20 511 aa19.64■□□□□ 0.73
ATG4D-211ENST00000589753 VSIG10Q8N0Z9 540 aa19.64■□□□□ 0.73
ATG4D-211ENST00000589753 C8orf58Q8NAV2 365 aa19.64■□□□□ 0.73
ATG4D-211ENST00000589753 LY75O60449 1722 aa19.64■□□□□ 0.73
ATG4D-211ENST00000589753 SNRPA1P09661 255 aaKnown RBP19.63■□□□□ 0.73
ATG4D-211ENST00000589753 EP400Q96L91 3159 aa19.63■□□□□ 0.73
ATG4D-211ENST00000589753 ELL2O00472 640 aaPredicted RBP19.62■□□□□ 0.73
ATG4D-211ENST00000589753 GIGYF1O75420 1035 aaPredicted RBP19.62■□□□□ 0.73
ATG4D-211ENST00000589753 ATP6V1AP38606 617 aa19.62■□□□□ 0.73
ATG4D-211ENST00000589753 SLC4A9Q96Q91 983 aa19.62■□□□□ 0.73
ATG4D-211ENST00000589753 HOXB7P09629 217 aa19.61■□□□□ 0.73
ATG4D-211ENST00000589753 TWISTNBQ3B726 338 aaPredicted RBP19.61■□□□□ 0.73
ATG4D-211ENST00000589753 TSPYL6Q8N831 410 aa19.61■□□□□ 0.73
ATG4D-211ENST00000589753 CCNL1Q9UK58 526 aaPredicted RBP19.61■□□□□ 0.73
ATG4D-211ENST00000589753 ZNF831Q5JPB2 1677 aa19.61■□□□□ 0.73
ATG4D-211ENST00000589753 RGPD3A6NKT7 1758 aaPredicted RBP19.6■□□□□ 0.73
ATG4D-211ENST00000589753 RGPD4Q7Z3J3 1758 aa19.6■□□□□ 0.73
ATG4D-211ENST00000589753 SOS1Q07889 1333 aaPredicted RBP19.6■□□□□ 0.73
ATG4D-211ENST00000589753 PRAMEF22A3QJZ6 481 aa19.6■□□□□ 0.73
ATG4D-211ENST00000589753 BAG6P46379 1132 aa19.6■□□□□ 0.73
ATG4D-211ENST00000589753 TEX13AQ9BXU3 409 aaPredicted RBP19.6■□□□□ 0.73
ATG4D-211ENST00000589753 C5P01031 1676 aa19.59■□□□□ 0.73
ATG4D-211ENST00000589753 CICQ96RK0 1608 aaPredicted RBP19.59■□□□□ 0.73
ATG4D-211ENST00000589753 DNAJC10Q8IXB1 793 aa19.59■□□□□ 0.73
ATG4D-211ENST00000589753 UPF1Q92900 1129 aaKnown RBP eCLIP19.59■□□□□ 0.733e-7■□□□□ 9.9
ATG4D-211ENST00000589753 TJP1Q07157 1748 aa19.59■□□□□ 0.73
ATG4D-211ENST00000589753 CT47B1P0C2W7 299 aaPredicted RBP19.58■□□□□ 0.72
ATG4D-211ENST00000589753 TXNRD1Q16881 649 aa19.58■□□□□ 0.72
ATG4D-211ENST00000589753 SLC27A3Q5K4L6 730 aa19.58■□□□□ 0.72
ATG4D-211ENST00000589753 LAMB4A4D0S4 1761 aa19.57■□□□□ 0.72
ATG4D-211ENST00000589753 VAMP4O75379 141 aa19.57■□□□□ 0.72
ATG4D-211ENST00000589753 KCNQ4P56696 695 aa19.57■□□□□ 0.72
ATG4D-211ENST00000589753 EN1Q05925 392 aaPredicted RBP19.57■□□□□ 0.72
ATG4D-211ENST00000589753 ITPK1Q13572 414 aa19.57■□□□□ 0.72
ATG4D-211ENST00000589753 USP16Q9Y5T5 823 aa19.57■□□□□ 0.72
ATG4D-211ENST00000589753 EIF2S2P20042 333 aaKnown RBP19.56■□□□□ 0.72
ATG4D-211ENST00000589753 HDGFL1Q5TGJ6 251 aa19.56■□□□□ 0.72
ATG4D-211ENST00000589753 PROM2Q8N271 834 aa19.56■□□□□ 0.72
ATG4D-211ENST00000589753 CAMKK2Q96RR4 588 aa19.56■□□□□ 0.72
ATG4D-211ENST00000589753 CHMP4AQ9BY43 222 aa19.56■□□□□ 0.72
ATG4D-211ENST00000589753 STARD3NLO95772 234 aa19.55■□□□□ 0.72
ATG4D-211ENST00000589753 EZH2Q15910 746 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms