RNA–Protein interactions for RNA: ENST00000589729.1

AC040963.1-202, humanhuman

TSL 5 BASIC

Gene AC040963.1, Length 644 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040963.1-202ENST00000589729 ERVV-2B6SEH9 535 aa22.28■■□□□ 1.16
AC040963.1-202ENST00000589729 R3HDM1Q15032 1099 aaKnown RBP22.28■■□□□ 1.16
AC040963.1-202ENST00000589729 MCM10Q7L590 875 aa22.28■■□□□ 1.16
AC040963.1-202ENST00000589729 NFATC2IPQ8NCF5 419 aa22.28■■□□□ 1.16
AC040963.1-202ENST00000589729 IL17REQ8NFR9 667 aa22.28■■□□□ 1.16
AC040963.1-202ENST00000589729 MRS2Q9HD23 443 aa22.28■■□□□ 1.16
AC040963.1-202ENST00000589729 TJP1Q07157 1748 aa22.28■■□□□ 1.16
AC040963.1-202ENST00000589729 UBR2Q8IWV8 1755 aa22.27■■□□□ 1.16
AC040963.1-202ENST00000589729 RRP7AQ9Y3A4 280 aaKnown RBP22.27■■□□□ 1.16
AC040963.1-202ENST00000589729 MAPK8IP3Q9UPT6 1336 aa22.27■■□□□ 1.16
AC040963.1-202ENST00000589729 ZNF827Q17R98 1081 aa22.26■■□□□ 1.15
AC040963.1-202ENST00000589729 SLC52A2Q9HAB3 445 aa22.26■■□□□ 1.15
AC040963.1-202ENST00000589729 CCNL1Q9UK58 526 aaPredicted RBP22.26■■□□□ 1.15
AC040963.1-202ENST00000589729 KCPQ6ZWJ8 1503 aa22.26■■□□□ 1.15
AC040963.1-202ENST00000589729 C4BP0C0L5 1744 aa22.26■■□□□ 1.15
AC040963.1-202ENST00000589729 COL5A3P25940 1745 aaPredicted RBP22.26■■□□□ 1.15
AC040963.1-202ENST00000589729 CASZ1Q86V15 1759 aa22.25■■□□□ 1.15
AC040963.1-202ENST00000589729 SLC39A6Q13433 755 aa22.25■■□□□ 1.15
AC040963.1-202ENST00000589729 THUMPD2Q9BTF0 503 aaKnown RBP22.25■■□□□ 1.15
AC040963.1-202ENST00000589729 CEMIPQ8WUJ3 1361 aa22.25■■□□□ 1.15
AC040963.1-202ENST00000589729 NFE2L2Q16236 605 aa22.24■■□□□ 1.15
AC040963.1-202ENST00000589729 SLC4A9Q96Q91 983 aa22.23■■□□□ 1.15
AC040963.1-202ENST00000589729 PDGFDQ9GZP0 370 aaPredicted RBP22.22■■□□□ 1.15
AC040963.1-202ENST00000589729 LOC102724428A0A0B4J2F2 783 aa22.21■■□□□ 1.15
AC040963.1-202ENST00000589729 SIK1P57059 783 aa22.21■■□□□ 1.15
AC040963.1-202ENST00000589729 ITPK1Q13572 414 aa22.21■■□□□ 1.15
AC040963.1-202ENST00000589729 ZNF831Q5JPB2 1677 aa22.2■■□□□ 1.15
AC040963.1-202ENST00000589729 PTCD1O75127 700 aaKnown RBP22.2■■□□□ 1.14
AC040963.1-202ENST00000589729 NEFMP07197 916 aa22.2■■□□□ 1.14
AC040963.1-202ENST00000589729 NEUROD2Q15784 382 aa22.2■■□□□ 1.14
AC040963.1-202ENST00000589729 SLC27A3Q5K4L6 730 aa22.2■■□□□ 1.14
AC040963.1-202ENST00000589729 SMARCC1Q92922 1105 aaPredicted RBP22.2■■□□□ 1.14
AC040963.1-202ENST00000589729 RBM42Q9BTD8 480 aaKnown RBP22.2■■□□□ 1.14
AC040963.1-202ENST00000589729 QSER1Q2KHR3 1735 aa22.2■■□□□ 1.14
AC040963.1-202ENST00000589729 KDM3BQ7LBC6 1761 aa22.2■■□□□ 1.14
AC040963.1-202ENST00000589729 UBR3Q6ZT12 1888 aa22.2■■□□□ 1.14
AC040963.1-202ENST00000589729 SMIM5Q71RC9 77 aa22.19■■□□□ 1.14
AC040963.1-202ENST00000589729 LINC00116Q8NCU8 138 aa22.19■■□□□ 1.14
AC040963.1-202ENST00000589729 RUNDC1Q96C34 613 aa22.19■■□□□ 1.14
AC040963.1-202ENST00000589729 CICQ96RK0 1608 aaPredicted RBP22.19■■□□□ 1.14
AC040963.1-202ENST00000589729 KCNQ3O43525 872 aa22.18■■□□□ 1.14
AC040963.1-202ENST00000589729 TMPOP42166 694 aaKnown RBP22.18■■□□□ 1.14
AC040963.1-202ENST00000589729 TEFQ10587 303 aa22.18■■□□□ 1.14
AC040963.1-202ENST00000589729 PNISRQ8TF01 805 aaKnown RBP22.18■■□□□ 1.14
AC040963.1-202ENST00000589729 RTF1Q92541 710 aaKnown RBP22.18■■□□□ 1.14
AC040963.1-202ENST00000589729 NBPF14Q5TI25 921 aa22.17■■□□□ 1.14
AC040963.1-202ENST00000589729 DIEXFQ68CQ4 756 aaKnown RBP22.17■■□□□ 1.14
AC040963.1-202ENST00000589729 AMIGO3Q86WK7 504 aa22.17■■□□□ 1.14
AC040963.1-202ENST00000589729 AKT1S1Q96B36 256 aa22.17■■□□□ 1.14
AC040963.1-202ENST00000589729 STK32BQ9NY57 414 aa22.17■■□□□ 1.14
AC040963.1-202ENST00000589729 MYH14Q7Z406 1995 aaKnown RBP22.17■■□□□ 1.14
AC040963.1-202ENST00000589729 ATP6V1AP38606 617 aa22.16■■□□□ 1.14
AC040963.1-202ENST00000589729 RIPK4P57078 832 aa22.16■■□□□ 1.14
AC040963.1-202ENST00000589729 PNNQ9H307 717 aaKnown RBP22.16■■□□□ 1.14
AC040963.1-202ENST00000589729 SLC15A2Q16348 729 aa22.15■■□□□ 1.14
AC040963.1-202ENST00000589729 MIS18AQ9NYP9 233 aa22.14■■□□□ 1.13
AC040963.1-202ENST00000589729 APAF1O14727 1248 aa22.13■■□□□ 1.13
AC040963.1-202ENST00000589729 FAM9BQ8IZU0 186 aa22.13■■□□□ 1.13
AC040963.1-202ENST00000589729 TRIM35Q9UPQ4 493 aa22.12■■□□□ 1.13
AC040963.1-202ENST00000589729 C4AP0C0L4 1744 aa22.11■■□□□ 1.13
AC040963.1-202ENST00000589729 PNPLA7Q6ZV29 1317 aa22.11■■□□□ 1.13
AC040963.1-202ENST00000589729 BTBD11A6QL63 1104 aa22.11■■□□□ 1.13
AC040963.1-202ENST00000589729 HTATSF1O43719 755 aaKnown RBP22.11■■□□□ 1.13
AC040963.1-202ENST00000589729 DNAJC10Q8IXB1 793 aa22.11■■□□□ 1.13
AC040963.1-202ENST00000589729 ZNF496Q96IT1 587 aaPredicted RBP22.11■■□□□ 1.13
AC040963.1-202ENST00000589729 ZNF790Q6PG37 636 aa22.1■■□□□ 1.13
AC040963.1-202ENST00000589729 MIER1Q8N108 512 aa22.1■■□□□ 1.13
AC040963.1-202ENST00000589729 PHF14O94880 888 aa22.09■■□□□ 1.13
AC040963.1-202ENST00000589729 TFCP2L1Q9NZI6 479 aa22.09■■□□□ 1.13
AC040963.1-202ENST00000589729 LAMB4A4D0S4 1761 aa22.09■■□□□ 1.13
AC040963.1-202ENST00000589729 LRP5O75197 1615 aa22.09■■□□□ 1.13
AC040963.1-202ENST00000589729 PRAMEF22A3QJZ6 481 aa22.08■■□□□ 1.13
AC040963.1-202ENST00000589729 TTC5Q8N0Z6 440 aa22.08■■□□□ 1.13
AC040963.1-202ENST00000589729 AK7Q96M32 723 aa22.08■■□□□ 1.13
AC040963.1-202ENST00000589729 ZBTB7AO95365 584 aa22.07■■□□□ 1.12
AC040963.1-202ENST00000589729 SRCAPQ6ZRS2 3230 aa22.06■■□□□ 1.12
AC040963.1-202ENST00000589729 GNPATO15228 680 aa22.06■■□□□ 1.12
AC040963.1-202ENST00000589729 HEG1Q9ULI3 1381 aa22.06■■□□□ 1.12
AC040963.1-202ENST00000589729 CRKLP46109 303 aaKnown RBP22.04■■□□□ 1.12
AC040963.1-202ENST00000589729 LMOD3Q0VAK6 560 aa22.04■■□□□ 1.12
AC040963.1-202ENST00000589729 TAF7Q15545 349 aaPredicted RBP22.04■■□□□ 1.12
AC040963.1-202ENST00000589729 COL23A1Q86Y22 540 aaPredicted RBP22.04■■□□□ 1.12
AC040963.1-202ENST00000589729 SALL2Q9Y467 1007 aaPredicted RBP22.04■■□□□ 1.12
AC040963.1-202ENST00000589729 CNTNAP4Q9C0A0 1308 aa22.03■■□□□ 1.12
AC040963.1-202ENST00000589729 MSH5O43196 834 aa22.02■■□□□ 1.12
AC040963.1-202ENST00000589729 LAS1LQ9Y4W2 734 aaKnown RBP22.02■■□□□ 1.12
AC040963.1-202ENST00000589729 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.01■■□□□ 1.11
AC040963.1-202ENST00000589729 CYP19A1P11511 503 aaPredicted RBP22.01■■□□□ 1.11
AC040963.1-202ENST00000589729 MSL1Q68DK7 614 aa22.01■■□□□ 1.11
AC040963.1-202ENST00000589729 INTS5Q6P9B9 1019 aaKnown RBP22.01■■□□□ 1.11
AC040963.1-202ENST00000589729 FMNL2Q96PY5 1086 aa22.01■■□□□ 1.11
AC040963.1-202ENST00000589729 ATF5Q9Y2D1 282 aaPredicted RBP22.01■■□□□ 1.11
AC040963.1-202ENST00000589729 COL24A1Q17RW2 1714 aa22■■□□□ 1.11
AC040963.1-202ENST00000589729 PIP4K2AP48426 406 aaPredicted RBP22■■□□□ 1.11
AC040963.1-202ENST00000589729 TSPYL4Q9UJ04 414 aa22■■□□□ 1.11
AC040963.1-202ENST00000589729 ZBTB1Q9Y2K1 713 aa22■■□□□ 1.11
AC040963.1-202ENST00000589729 CCER2I3L3R5 266 aa21.99■■□□□ 1.11
AC040963.1-202ENST00000589729 KRT24Q2M2I5 525 aa21.99■■□□□ 1.11
AC040963.1-202ENST00000589729 CCDC87Q9NVE4 849 aa21.98■■□□□ 1.11
AC040963.1-202ENST00000589729 EIF4A1P60842 406 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms