RNA–Protein interactions for RNA: ENST00000588954.5

ZNF440-206, Transcript of zinc finger protein 440, humanhuman

TSL 5

Gene ZNF440, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-206ENST00000588954 RNMTO43148 476 aaKnown RBP12.18□□□□□ -0.46
ZNF440-206ENST00000588954 HTATSF1O43719 755 aaKnown RBP12.18□□□□□ -0.46
ZNF440-206ENST00000588954 LMOD3Q0VAK6 560 aa12.18□□□□□ -0.46
ZNF440-206ENST00000588954 PLSCR1O15162 318 aa12.17□□□□□ -0.46
ZNF440-206ENST00000588954 RIPK4P57078 832 aa12.17□□□□□ -0.46
ZNF440-206ENST00000588954 TEFQ10587 303 aa12.17□□□□□ -0.46
ZNF440-206ENST00000588954 TMPOP42166 694 aaKnown RBP12.16□□□□□ -0.46
ZNF440-206ENST00000588954 PTF1AQ7RTS3 328 aa12.16□□□□□ -0.46
ZNF440-206ENST00000588954 DEFB132Q7Z7B7 95 aa12.16□□□□□ -0.46
ZNF440-206ENST00000588954 NFATC2IPQ8NCF5 419 aa12.16□□□□□ -0.46
ZNF440-206ENST00000588954 PIGBQ92521 554 aa12.16□□□□□ -0.46
ZNF440-206ENST00000588954 SMARCC1Q92922 1105 aaPredicted RBP12.16□□□□□ -0.46
ZNF440-206ENST00000588954 LGR6Q9HBX8 967 aa12.16□□□□□ -0.46
ZNF440-206ENST00000588954 SBF2Q86WG5 1849 aa12.16□□□□□ -0.46
ZNF440-206ENST00000588954 DOT1LQ8TEK3 1739 aa12.15□□□□□ -0.46
ZNF440-206ENST00000588954 KDM6AO15550 1401 aaPredicted RBP12.15□□□□□ -0.46
ZNF440-206ENST00000588954 HMGB2P26583 209 aaKnown RBP12.15□□□□□ -0.46
ZNF440-206ENST00000588954 EN1Q05925 392 aaPredicted RBP12.15□□□□□ -0.46
ZNF440-206ENST00000588954 NEUROD2Q15784 382 aa12.15□□□□□ -0.46
ZNF440-206ENST00000588954 IL17REQ8NFR9 667 aa12.15□□□□□ -0.46
ZNF440-206ENST00000588954 SLC52A2Q9HAB3 445 aa12.15□□□□□ -0.46
ZNF440-206ENST00000588954 NHSQ6T4R5 1651 aa12.15□□□□□ -0.46
ZNF440-206ENST00000588954 APAF1O14727 1248 aa12.14□□□□□ -0.47
ZNF440-206ENST00000588954 MCM10Q7L590 875 aa12.14□□□□□ -0.47
ZNF440-206ENST00000588954 RRP7AQ9Y3A4 280 aaKnown RBP12.14□□□□□ -0.47
ZNF440-206ENST00000588954 EP400Q96L91 3159 aa12.13□□□□□ -0.47
ZNF440-206ENST00000588954 CAMKK2Q96RR4 588 aa12.13□□□□□ -0.47
ZNF440-206ENST00000588954 DCTN1Q14203 1278 aa12.12□□□□□ -0.47
ZNF440-206ENST00000588954 EZH2Q15910 746 aaKnown RBP12.12□□□□□ -0.47
ZNF440-206ENST00000588954 ASAP1Q9ULH1 1129 aa12.12□□□□□ -0.47
ZNF440-206ENST00000588954 CEMIPQ8WUJ3 1361 aa12.12□□□□□ -0.47
ZNF440-206ENST00000588954 TNS1Q9HBL0 1735 aaKnown RBP12.11□□□□□ -0.47
ZNF440-206ENST00000588954 SCN11AQ9UI33 1791 aa12.11□□□□□ -0.47
ZNF440-206ENST00000588954 PALLDQ8WX93 1383 aa12.11□□□□□ -0.47
ZNF440-206ENST00000588954 BTBD11A6QL63 1104 aa12.11□□□□□ -0.47
ZNF440-206ENST00000588954 CALD1Q05682 793 aaKnown RBP12.11□□□□□ -0.47
ZNF440-206ENST00000588954 TAF7Q15545 349 aaPredicted RBP12.11□□□□□ -0.47
ZNF440-206ENST00000588954 TXNRD1Q16881 649 aa12.11□□□□□ -0.47
ZNF440-206ENST00000588954 SLC27A3Q5K4L6 730 aa12.11□□□□□ -0.47
ZNF440-206ENST00000588954 TTC5Q8N0Z6 440 aa12.11□□□□□ -0.47
ZNF440-206ENST00000588954 ATG3Q9NT62 314 aa12.11□□□□□ -0.47
ZNF440-206ENST00000588954 BTAF1O14981 1849 aa12.11□□□□□ -0.47
ZNF440-206ENST00000588954 TOGARAM1Q9Y4F4 1720 aa12.11□□□□□ -0.47
ZNF440-206ENST00000588954 ITGB4P16144 1822 aa12.1□□□□□ -0.47
ZNF440-206ENST00000588954 NBPF14Q5TI25 921 aa12.1□□□□□ -0.47
ZNF440-206ENST00000588954 NGEFQ8N5V2 710 aa12.1□□□□□ -0.47
ZNF440-206ENST00000588954 RBM42Q9BTD8 480 aaKnown RBP12.1□□□□□ -0.47
ZNF440-206ENST00000588954 CCNL1Q9UK58 526 aaPredicted RBP12.1□□□□□ -0.47
ZNF440-206ENST00000588954 MRC1P22897 1456 aa12.09□□□□□ -0.47
ZNF440-206ENST00000588954 THUMPD2Q9BTF0 503 aaKnown RBP12.09□□□□□ -0.47
ZNF440-206ENST00000588954 ADAMTS7Q9UKP4 1686 aa12.08□□□□□ -0.48
ZNF440-206ENST00000588954 LOC102724428A0A0B4J2F2 783 aa12.08□□□□□ -0.48
ZNF440-206ENST00000588954 PTCD1O75127 700 aaKnown RBP12.08□□□□□ -0.48
ZNF440-206ENST00000588954 SIK1P57059 783 aa12.08□□□□□ -0.48
ZNF440-206ENST00000588954 SLC39A6Q13433 755 aa12.08□□□□□ -0.48
ZNF440-206ENST00000588954 ZNF790Q6PG37 636 aa12.08□□□□□ -0.48
ZNF440-206ENST00000588954 TRIM35Q9UPQ4 493 aa12.08□□□□□ -0.48
ZNF440-206ENST00000588954 ATP6V1AP38606 617 aa12.07□□□□□ -0.48
ZNF440-206ENST00000588954 CCDC27Q2M243 656 aa12.07□□□□□ -0.48
ZNF440-206ENST00000588954 PROM2Q8N271 834 aa12.07□□□□□ -0.48
ZNF440-206ENST00000588954 BABAM1Q9NWV8 329 aa12.07□□□□□ -0.48
ZNF440-206ENST00000588954 LAS1LQ9Y4W2 734 aaKnown RBP12.07□□□□□ -0.48
ZNF440-206ENST00000588954 DLG5Q8TDM6 1919 aa12.07□□□□□ -0.48
ZNF440-206ENST00000588954 RGPD3A6NKT7 1758 aaPredicted RBP12.07□□□□□ -0.48
ZNF440-206ENST00000588954 RGPD4Q7Z3J3 1758 aa12.07□□□□□ -0.48
ZNF440-206ENST00000588954 SENP3-EIF4A1A0A087X0R7 540 aa12.06□□□□□ -0.48
ZNF440-206ENST00000588954 FMNL2Q96PY5 1086 aa12.06□□□□□ -0.48
ZNF440-206ENST00000588954 STK32BQ9NY57 414 aa12.06□□□□□ -0.48
ZNF440-206ENST00000588954 TSPYL4Q9UJ04 414 aa12.06□□□□□ -0.48
ZNF440-206ENST00000588954 SALL2Q9Y467 1007 aaPredicted RBP12.06□□□□□ -0.48
ZNF440-206ENST00000588954 VIRMAQ69YN4 1812 aaKnown RBP12.05□□□□□ -0.48
ZNF440-206ENST00000588954 KCNQ4P56696 695 aa12.05□□□□□ -0.48
ZNF440-206ENST00000588954 WWC1Q8IX03 1113 aa12.05□□□□□ -0.48
ZNF440-206ENST00000588954 VSIG10Q8N0Z9 540 aa12.05□□□□□ -0.48
ZNF440-206ENST00000588954 LRRC4BQ9NT99 713 aa12.05□□□□□ -0.48
ZNF440-206ENST00000588954 MIS18AQ9NYP9 233 aa12.05□□□□□ -0.48
ZNF440-206ENST00000588954 GNAI1P63096 354 aa12.04□□□□□ -0.48
ZNF440-206ENST00000588954 CFAP44Q96MT7 982 aa12.04□□□□□ -0.48
ZNF440-206ENST00000588954 TEX13AQ9BXU3 409 aaPredicted RBP12.04□□□□□ -0.48
ZNF440-206ENST00000588954 WDR63Q8IWG1 891 aa12.03□□□□□ -0.48
ZNF440-206ENST00000588954 ZNF496Q96IT1 587 aaPredicted RBP12.03□□□□□ -0.48
ZNF440-206ENST00000588954 AK7Q96M32 723 aa12.03□□□□□ -0.48
ZNF440-206ENST00000588954 IFT57Q9NWB7 429 aa12.03□□□□□ -0.48
ZNF440-206ENST00000588954 ZBTB12Q9Y330 459 aaPredicted RBP12.03□□□□□ -0.48
ZNF440-206ENST00000588954 LY75O60449 1722 aa12.03□□□□□ -0.48
ZNF440-206ENST00000588954 CHL1O00533 1208 aa12.02□□□□□ -0.49
ZNF440-206ENST00000588954 KCNQ3O43525 872 aa12.02□□□□□ -0.49
ZNF440-206ENST00000588954 STARD3NLO95772 234 aa12.02□□□□□ -0.49
ZNF440-206ENST00000588954 SNRPA1P09661 255 aaKnown RBP12.02□□□□□ -0.49
ZNF440-206ENST00000588954 TFCP2L1Q9NZI6 479 aa12.02□□□□□ -0.49
ZNF440-206ENST00000588954 IL16Q14005 1332 aa12.02□□□□□ -0.49
ZNF440-206ENST00000588954 HEG1Q9ULI3 1381 aa12.02□□□□□ -0.49
ZNF440-206ENST00000588954 RREB1Q92766 1687 aa12.01□□□□□ -0.49
ZNF440-206ENST00000588954 SIPA1L3O60292 1781 aaPredicted RBP12.01□□□□□ -0.49
ZNF440-206ENST00000588954 ITPK1Q13572 414 aa12.01□□□□□ -0.49
ZNF440-206ENST00000588954 SLC15A2Q16348 729 aa12.01□□□□□ -0.49
ZNF440-206ENST00000588954 DNAJC10Q8IXB1 793 aa12.01□□□□□ -0.49
ZNF440-206ENST00000588954 SLC4A9Q96Q91 983 aa12.01□□□□□ -0.49
ZNF440-206ENST00000588954 EIF4A1P60842 406 aaKnown RBP12□□□□□ -0.49
ZNF440-206ENST00000588954 R3HDM1Q15032 1099 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms