RNA–Protein interactions for RNA: ENST00000588706.1

TUBD1-209, Transcript of tubulin delta 1, humanhuman

TSL 5

Gene TUBD1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-209ENST00000588706 POGKQ9P215 609 aa13.28□□□□□ -0.28
TUBD1-209ENST00000588706 ADGRG1Q9Y653 693 aa13.28□□□□□ -0.28
TUBD1-209ENST00000588706 COL3A1P02461 1466 aaPredicted RBP13.28□□□□□ -0.28
TUBD1-209ENST00000588706 C3orf80F5H4A9 247 aa13.27□□□□□ -0.29
TUBD1-209ENST00000588706 SRPK2P78362 688 aaKnown RBP13.27□□□□□ -0.29
TUBD1-209ENST00000588706 TCP11L2Q8N4U5 519 aa13.27□□□□□ -0.29
TUBD1-209ENST00000588706 KCTD12Q96CX2 325 aaKnown RBP13.27□□□□□ -0.29
TUBD1-209ENST00000588706 PNPLA6Q8IY17 1366 aa13.27□□□□□ -0.29
TUBD1-209ENST00000588706 TECPR2O15040 1411 aa13.27□□□□□ -0.29
TUBD1-209ENST00000588706 PLIN1O60240 522 aa13.26□□□□□ -0.29
TUBD1-209ENST00000588706 ANKK1Q8NFD2 765 aa13.26□□□□□ -0.29
TUBD1-209ENST00000588706 WNT2BQ93097 391 aa13.26□□□□□ -0.29
TUBD1-209ENST00000588706 ZFRQ96KR1 1074 aaKnown RBP13.26□□□□□ -0.29
TUBD1-209ENST00000588706 NLRP1Q9C000 1473 aa13.26□□□□□ -0.29
TUBD1-209ENST00000588706 RIMS2Q9UQ26 1411 aa13.26□□□□□ -0.29
TUBD1-209ENST00000588706 CPS1P31327 1500 aa13.25□□□□□ -0.29
TUBD1-209ENST00000588706 OATP04181 439 aa13.25□□□□□ -0.29
TUBD1-209ENST00000588706 MAP2K5Q13163 448 aa13.25□□□□□ -0.29
TUBD1-209ENST00000588706 CLUAP1Q96AJ1 413 aa13.25□□□□□ -0.29
TUBD1-209ENST00000588706 EDC4Q6P2E9 1401 aaKnown RBP13.24□□□□□ -0.29
TUBD1-209ENST00000588706 FAM69CQ0P6D2 419 aa13.24□□□□□ -0.29
TUBD1-209ENST00000588706 CD163L1Q9NR16 1453 aa13.23□□□□□ -0.29
TUBD1-209ENST00000588706 AATKQ6ZMQ8 1374 aa13.23□□□□□ -0.29
TUBD1-209ENST00000588706 U2AF1L5P0DN76 240 aaPredicted RBP13.23□□□□□ -0.29
TUBD1-209ENST00000588706 RARSP54136 660 aaKnown RBP13.23□□□□□ -0.29
TUBD1-209ENST00000588706 U2AF1Q01081 240 aaKnown RBP eCLIP13.23□□□□□ -0.29
TUBD1-209ENST00000588706 KRI1Q8N9T8 703 aaKnown RBP13.23□□□□□ -0.29
TUBD1-209ENST00000588706 EYA1Q99502 592 aa13.23□□□□□ -0.29
TUBD1-209ENST00000588706 DAXXQ9UER7 740 aaPredicted RBP13.23□□□□□ -0.29
TUBD1-209ENST00000588706 PPIP5K1Q6PFW1 1433 aa13.22□□□□□ -0.29
TUBD1-209ENST00000588706 MON2Q7Z3U7 1717 aa13.22□□□□□ -0.29
TUBD1-209ENST00000588706 EIF5BO60841 1220 aaKnown RBP13.22□□□□□ -0.29
TUBD1-209ENST00000588706 ZMYND10O75800 440 aa13.22□□□□□ -0.29
TUBD1-209ENST00000588706 PRAM1Q96QH2 718 aa13.22□□□□□ -0.29
TUBD1-209ENST00000588706 TSPOAP1O95153 1857 aa13.22□□□□□ -0.29
TUBD1-209ENST00000588706 CDK12Q9NYV4 1490 aaPredicted RBP13.22□□□□□ -0.29
TUBD1-209ENST00000588706 ITSN1Q15811 1721 aa13.22□□□□□ -0.29
TUBD1-209ENST00000588706 MINK1Q8N4C8 1332 aaPredicted RBP13.21□□□□□ -0.29
TUBD1-209ENST00000588706 KIF16BQ96L93 1317 aa13.21□□□□□ -0.29
TUBD1-209ENST00000588706 IPO8O15397 1037 aaKnown RBP13.21□□□□□ -0.29
TUBD1-209ENST00000588706 DIAPH1O60610 1272 aaKnown RBP13.21□□□□□ -0.29
TUBD1-209ENST00000588706 LMOD3Q0VAK6 560 aa13.21□□□□□ -0.29
TUBD1-209ENST00000588706 ZKSCAN2Q63HK3 967 aa13.21□□□□□ -0.29
TUBD1-209ENST00000588706 RWDD1Q9H446 243 aaPredicted RBP13.21□□□□□ -0.29
TUBD1-209ENST00000588706 ESF1Q9H501 851 aaKnown RBP13.21□□□□□ -0.29
TUBD1-209ENST00000588706 AKAP12Q02952 1782 aa13.21□□□□□ -0.29
TUBD1-209ENST00000588706 ALDH1L2Q3SY69 923 aa13.2□□□□□ -0.3
TUBD1-209ENST00000588706 C20orf194Q5TEA3 1177 aa13.2□□□□□ -0.3
TUBD1-209ENST00000588706 BARGINQ6ZT62 677 aa13.2□□□□□ -0.3
TUBD1-209ENST00000588706 LRCH3Q96II8 777 aa13.2□□□□□ -0.3
TUBD1-209ENST00000588706 NRXN3Q9Y4C0 1643 aa13.2□□□□□ -0.3
TUBD1-209ENST00000588706 KIF13AQ9H1H9 1805 aa13.2□□□□□ -0.3
TUBD1-209ENST00000588706 SENP3-EIF4A1A0A087X0R7 540 aa13.19□□□□□ -0.3
TUBD1-209ENST00000588706 FYB1O15117 783 aa13.19□□□□□ -0.3
TUBD1-209ENST00000588706 DNAJB2P25686 324 aa13.19□□□□□ -0.3
TUBD1-209ENST00000588706 BRPF1P55201 1214 aaPredicted RBP13.19□□□□□ -0.3
TUBD1-209ENST00000588706 METTL3Q86U44 580 aaKnown RBP13.19□□□□□ -0.3
TUBD1-209ENST00000588706 PXYLP1Q8TE99 480 aa13.19□□□□□ -0.3
TUBD1-209ENST00000588706 CPSF1Q10570 1443 aaKnown RBP13.19□□□□□ -0.3
TUBD1-209ENST00000588706 IRF6O14896 467 aa13.18□□□□□ -0.3
TUBD1-209ENST00000588706 TMPOP42166 694 aaKnown RBP13.18□□□□□ -0.3
TUBD1-209ENST00000588706 THSD4Q6ZMP0 1018 aa13.18□□□□□ -0.3
TUBD1-209ENST00000588706 SAMD7Q7Z3H4 446 aa13.18□□□□□ -0.3
TUBD1-209ENST00000588706 PLEKHF1Q96S99 279 aa13.18□□□□□ -0.3
TUBD1-209ENST00000588706 CDK19Q9BWU1 502 aa13.18□□□□□ -0.3
TUBD1-209ENST00000588706 UPF2Q9HAU5 1272 aaKnown RBP13.18□□□□□ -0.3
TUBD1-209ENST00000588706 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.18□□□□□ -0.3
TUBD1-209ENST00000588706 DDX19BQ9UMR2 479 aa13.18□□□□□ -0.3
TUBD1-209ENST00000588706 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.17□□□□□ -0.3
TUBD1-209ENST00000588706 RCCD1A6NED2 376 aa13.17□□□□□ -0.3
TUBD1-209ENST00000588706 BCAR3O75815 825 aa13.17□□□□□ -0.3
TUBD1-209ENST00000588706 CYB5RLQ6IPT4 315 aa13.17□□□□□ -0.3
TUBD1-209ENST00000588706 MAP2P11137 1827 aaKnown RBP13.17□□□□□ -0.3
TUBD1-209ENST00000588706 SOWAHBA6NEL2 793 aa13.16□□□□□ -0.3
TUBD1-209ENST00000588706 BCAMP50895 628 aa13.16□□□□□ -0.3
TUBD1-209ENST00000588706 MVPQ14764 893 aaKnown RBP13.16□□□□□ -0.3
TUBD1-209ENST00000588706 CCDC102AQ96A19 550 aa13.16□□□□□ -0.3
TUBD1-209ENST00000588706 UBR1Q8IWV7 1749 aa13.16□□□□□ -0.3
TUBD1-209ENST00000588706 DIP2AQ14689 1571 aa13.15□□□□□ -0.3
TUBD1-209ENST00000588706 RNF40O75150 1001 aa13.15□□□□□ -0.3
TUBD1-209ENST00000588706 SLC4A3P48751 1232 aa13.15□□□□□ -0.3
TUBD1-209ENST00000588706 C8orf34Q49A92 452 aa13.15□□□□□ -0.3
TUBD1-209ENST00000588706 FTSJ3Q8IY81 847 aaKnown RBP13.15□□□□□ -0.3
TUBD1-209ENST00000588706 DZIP1LQ8IYY4 767 aaKnown RBP13.15□□□□□ -0.3
TUBD1-209ENST00000588706 STK26Q9P289 416 aa13.15□□□□□ -0.3
TUBD1-209ENST00000588706 TNRQ92752 1358 aa13.15□□□□□ -0.3
TUBD1-209ENST00000588706 C3P01024 1663 aa13.15□□□□□ -0.31
TUBD1-209ENST00000588706 WASLO00401 505 aaPredicted RBP13.14□□□□□ -0.31
TUBD1-209ENST00000588706 TNNT2P45379 298 aaPredicted RBP13.14□□□□□ -0.31
TUBD1-209ENST00000588706 BECN1Q14457 450 aa13.14□□□□□ -0.31
TUBD1-209ENST00000588706 SWT1Q5T5J6 900 aaKnown RBP13.14□□□□□ -0.31
TUBD1-209ENST00000588706 LRRC7Q96NW7 1537 aa13.13□□□□□ -0.31
TUBD1-209ENST00000588706 RIMS1Q86UR5 1692 aaKnown RBP13.13□□□□□ -0.31
TUBD1-209ENST00000588706 NRKQ7Z2Y5 1582 aa13.13□□□□□ -0.31
TUBD1-209ENST00000588706 PTPN5P54829 565 aa13.13□□□□□ -0.31
TUBD1-209ENST00000588706 HDAC1Q13547 482 aaPredicted RBP13.13□□□□□ -0.31
TUBD1-209ENST00000588706 ARHGAP45Q92619 1136 aa13.13□□□□□ -0.31
TUBD1-209ENST00000588706 TMEM134Q9H6X4 195 aa13.13□□□□□ -0.31
TUBD1-209ENST00000588706 TOPAZ1Q8N9V7 1692 aa13.12□□□□□ -0.31
TUBD1-209ENST00000588706 KIF24Q5T7B8 1368 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms