RNA–Protein interactions for RNA: ENST00000588289.1

TMED1-204, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2 BASIC

Gene TMED1, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-204ENST00000588289 BRPF1P55201 1214 aaPredicted RBP16.19■□□□□ 0.18
TMED1-204ENST00000588289 LRP6O75581 1613 aa16.19■□□□□ 0.18
TMED1-204ENST00000588289 VAMP4O75379 141 aa16.18■□□□□ 0.18
TMED1-204ENST00000588289 BCAR3O75815 825 aa16.18■□□□□ 0.18
TMED1-204ENST00000588289 CCDC30Q5VVM6 783 aa16.18■□□□□ 0.18
TMED1-204ENST00000588289 MPRIPQ6WCQ1 1025 aa16.18■□□□□ 0.18
TMED1-204ENST00000588289 ARHGAP45Q92619 1136 aa16.18■□□□□ 0.18
TMED1-204ENST00000588289 NGLY1Q96IV0 654 aa16.18■□□□□ 0.18
TMED1-204ENST00000588289 CCDC9Q9Y3X0 531 aaKnown RBP16.18■□□□□ 0.18
TMED1-204ENST00000588289 MRC1P22897 1456 aa16.17■□□□□ 0.18
TMED1-204ENST00000588289 TTC5Q8N0Z6 440 aa16.17■□□□□ 0.18
TMED1-204ENST00000588289 CCDC136Q96JN2 1154 aa16.17■□□□□ 0.18
TMED1-204ENST00000588289 API5Q9BZZ5 524 aaKnown RBP16.17■□□□□ 0.18
TMED1-204ENST00000588289 USP35Q9P2H5 1018 aa16.17■□□□□ 0.18
TMED1-204ENST00000588289 SLIT2O94813 1529 aa16.17■□□□□ 0.18
TMED1-204ENST00000588289 KAT6BQ8WYB5 2073 aa16.17■□□□□ 0.18
TMED1-204ENST00000588289 ERVV-2B6SEH9 535 aa16.16■□□□□ 0.18
TMED1-204ENST00000588289 EXOC5O00471 708 aa16.16■□□□□ 0.18
TMED1-204ENST00000588289 CABP4P57796 275 aa16.16■□□□□ 0.18
TMED1-204ENST00000588289 ZNF772Q68DY9 489 aaPredicted RBP16.16■□□□□ 0.18
TMED1-204ENST00000588289 SSH1Q8WYL5 1049 aa16.16■□□□□ 0.18
TMED1-204ENST00000588289 SLC52A2Q9HAB3 445 aa16.16■□□□□ 0.18
TMED1-204ENST00000588289 SHANK3Q9BYB0 1731 aa16.16■□□□□ 0.18
TMED1-204ENST00000588289 PLIN1O60240 522 aa16.15■□□□□ 0.18
TMED1-204ENST00000588289 ATF7IPQ6VMQ6 1270 aa16.15■□□□□ 0.18
TMED1-204ENST00000588289 UNC5CLQ8IV45 518 aa16.15■□□□□ 0.18
TMED1-204ENST00000588289 DZIP1LQ8IYY4 767 aaKnown RBP16.15■□□□□ 0.18
TMED1-204ENST00000588289 C8orf37Q96NL8 207 aa16.15■□□□□ 0.18
TMED1-204ENST00000588289 PTPRCP08575 1304 aa16.15■□□□□ 0.18
TMED1-204ENST00000588289 TNS2Q63HR2 1409 aa16.14■□□□□ 0.17
TMED1-204ENST00000588289 BCL2L13Q9BXK5 485 aa16.14■□□□□ 0.17
TMED1-204ENST00000588289 LGR6Q9HBX8 967 aa16.14■□□□□ 0.17
TMED1-204ENST00000588289 SPATA31A1Q5TZJ5 1347 aa16.14■□□□□ 0.17
TMED1-204ENST00000588289 ELL2O00472 640 aaPredicted RBP16.13■□□□□ 0.17
TMED1-204ENST00000588289 RXRBP28702 533 aa16.13■□□□□ 0.17
TMED1-204ENST00000588289 NKX1-1Q15270 411 aaPredicted RBP16.13■□□□□ 0.17
TMED1-204ENST00000588289 BARGINQ6ZT62 677 aa16.13■□□□□ 0.17
TMED1-204ENST00000588289 C8orf58Q8NAV2 365 aa16.13■□□□□ 0.17
TMED1-204ENST00000588289 DISP2A7MBM2 1401 aa16.12■□□□□ 0.17
TMED1-204ENST00000588289 CYP27B1O15528 508 aa16.12■□□□□ 0.17
TMED1-204ENST00000588289 NOB1Q9ULX3 412 aaKnown RBP16.12■□□□□ 0.17
TMED1-204ENST00000588289 DDX19BQ9UMR2 479 aa16.12■□□□□ 0.17
TMED1-204ENST00000588289 SPATA31A5Q5VU36 1347 aa16.12■□□□□ 0.17
TMED1-204ENST00000588289 SPATA31A7Q8IWB4 1347 aa16.12■□□□□ 0.17
TMED1-204ENST00000588289 KDM6AO15550 1401 aaPredicted RBP16.11■□□□□ 0.17
TMED1-204ENST00000588289 LAMB4A4D0S4 1761 aa16.11■□□□□ 0.17
TMED1-204ENST00000588289 VPS72Q15906 364 aa16.11■□□□□ 0.17
TMED1-204ENST00000588289 DDB1Q16531 1140 aa16.11■□□□□ 0.17
TMED1-204ENST00000588289 HDGFL1Q5TGJ6 251 aa16.11■□□□□ 0.17
TMED1-204ENST00000588289 MRPL50Q8N5N7 158 aaKnown RBP16.11■□□□□ 0.17
TMED1-204ENST00000588289 TSPYL6Q8N831 410 aa16.11■□□□□ 0.17
TMED1-204ENST00000588289 DDX54Q8TDD1 881 aaKnown RBP16.11■□□□□ 0.17
TMED1-204ENST00000588289 CRBNQ96SW2 442 aa16.11■□□□□ 0.17
TMED1-204ENST00000588289 MIS18AQ9NYP9 233 aa16.11■□□□□ 0.17
TMED1-204ENST00000588289 EIF4A1P60842 406 aaKnown RBP16.1■□□□□ 0.17
TMED1-204ENST00000588289 ITGB4P16144 1822 aa16.1■□□□□ 0.17
TMED1-204ENST00000588289 MVPQ14764 893 aaKnown RBP16.09■□□□□ 0.17
TMED1-204ENST00000588289 ZNF790Q6PG37 636 aa16.09■□□□□ 0.17
TMED1-204ENST00000588289 FNBP4Q8N3X1 1017 aaPredicted RBP16.09■□□□□ 0.17
TMED1-204ENST00000588289 EXOC6Q8TAG9 804 aa16.09■□□□□ 0.17
TMED1-204ENST00000588289 FMNL2Q96PY5 1086 aa16.09■□□□□ 0.17
TMED1-204ENST00000588289 TMOD3Q9NYL9 352 aa16.09■□□□□ 0.17
TMED1-204ENST00000588289 USP21Q9UK80 565 aa16.09■□□□□ 0.17
TMED1-204ENST00000588289 ITPRIPQ8IWB1 547 aa16.08■□□□□ 0.16
TMED1-204ENST00000588289 NFATC2IPQ8NCF5 419 aa16.08■□□□□ 0.16
TMED1-204ENST00000588289 UBR2Q8IWV8 1755 aa16.08■□□□□ 0.16
TMED1-204ENST00000588289 SLC4A2P04920 1241 aa16.07■□□□□ 0.16
TMED1-204ENST00000588289 TRIM27P14373 513 aa16.07■□□□□ 0.16
TMED1-204ENST00000588289 DBF4Q9UBU7 674 aaPredicted RBP16.07■□□□□ 0.16
TMED1-204ENST00000588289 PAPPAQ13219 1627 aa16.07■□□□□ 0.16
TMED1-204ENST00000588289 N4BP2Q86UW6 1770 aaPredicted RBP16.06■□□□□ 0.16
TMED1-204ENST00000588289 EP400Q96L91 3159 aa16.06■□□□□ 0.16
TMED1-204ENST00000588289 DOT1LQ8TEK3 1739 aa16.05■□□□□ 0.16
TMED1-204ENST00000588289 A0A0G2JS52 829 aa16.05■□□□□ 0.16
TMED1-204ENST00000588289 DDX58O95786 925 aaKnown RBP16.05■□□□□ 0.16
TMED1-204ENST00000588289 SNRPA1P09661 255 aaKnown RBP16.05■□□□□ 0.16
TMED1-204ENST00000588289 MYT1Q01538 1121 aa16.05■□□□□ 0.16
TMED1-204ENST00000588289 CLUAP1Q96AJ1 413 aa16.05■□□□□ 0.16
TMED1-204ENST00000588289 TRPC5Q9UL62 973 aaPredicted RBP16.05■□□□□ 0.16
TMED1-204ENST00000588289 COG6Q9Y2V7 657 aa16.05■□□□□ 0.16
TMED1-204ENST00000588289 ERBB4Q15303 1308 aa16.04■□□□□ 0.16
TMED1-204ENST00000588289 CCT4P50991 539 aaKnown RBP16.04■□□□□ 0.16
TMED1-204ENST00000588289 C20orf194Q5TEA3 1177 aa16.04■□□□□ 0.16
TMED1-204ENST00000588289 PANK1Q8TE04 598 aa16.04■□□□□ 0.16
TMED1-204ENST00000588289 TEX13AQ9BXU3 409 aaPredicted RBP16.04■□□□□ 0.16
TMED1-204ENST00000588289 HYPKQ9NX55 129 aa16.04■□□□□ 0.16
TMED1-204ENST00000588289 PXDNLA1KZ92 1463 aa16.03■□□□□ 0.16
TMED1-204ENST00000588289 BCL9LQ86UU0 1499 aa16.03■□□□□ 0.16
TMED1-204ENST00000588289 TOGARAM1Q9Y4F4 1720 aa16.03■□□□□ 0.16
TMED1-204ENST00000588289 ABCC4O15439 1325 aa16.03■□□□□ 0.16
TMED1-204ENST00000588289 GIGYF1O75420 1035 aaPredicted RBP16.03■□□□□ 0.16
TMED1-204ENST00000588289 EIF2S2P20042 333 aaKnown RBP16.03■□□□□ 0.16
TMED1-204ENST00000588289 FKBP5Q13451 457 aaPredicted RBP16.03■□□□□ 0.16
TMED1-204ENST00000588289 HDAC5Q9UQL6 1122 aa16.03■□□□□ 0.16
TMED1-204ENST00000588289 RGS12O14924 1447 aa16.02■□□□□ 0.16
TMED1-204ENST00000588289 HEG1Q9ULI3 1381 aa16.02■□□□□ 0.16
TMED1-204ENST00000588289 KRT24Q2M2I5 525 aa16.02■□□□□ 0.16
TMED1-204ENST00000588289 B4GALNT3Q6L9W6 998 aa16.02■□□□□ 0.16
TMED1-204ENST00000588289 CENPQQ7L2Z9 268 aaPredicted RBP16.02■□□□□ 0.16
TMED1-204ENST00000588289 C5P01031 1676 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms