RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 OVOS2A0A0G2JMS6 1433 aa13.47□□□□□ -0.25
CHMP1B-202ENST00000588284 SPATA31A6Q5VVP1 1343 aa13.47□□□□□ -0.25
CHMP1B-202ENST00000588284 PLIN1O60240 522 aa13.47□□□□□ -0.25
CHMP1B-202ENST00000588284 PHKG2P15735 406 aa13.47□□□□□ -0.25
CHMP1B-202ENST00000588284 MPRIPQ6WCQ1 1025 aa13.47□□□□□ -0.25
CHMP1B-202ENST00000588284 C8orf58Q8NAV2 365 aa13.47□□□□□ -0.25
CHMP1B-202ENST00000588284 DCAF5Q96JK2 942 aa13.47□□□□□ -0.25
CHMP1B-202ENST00000588284 CDCA7Q9BWT1 371 aaPredicted RBP13.47□□□□□ -0.25
CHMP1B-202ENST00000588284 ZKSCAN2Q63HK3 967 aa13.46□□□□□ -0.25
CHMP1B-202ENST00000588284 SSH1Q8WYL5 1049 aa13.46□□□□□ -0.25
CHMP1B-202ENST00000588284 RBM42Q9BTD8 480 aaKnown RBP13.46□□□□□ -0.25
CHMP1B-202ENST00000588284 THRAP3Q9Y2W1 955 aaKnown RBP13.46□□□□□ -0.25
CHMP1B-202ENST00000588284 KIF16BQ96L93 1317 aa13.45□□□□□ -0.26
CHMP1B-202ENST00000588284 ELL2O00472 640 aaPredicted RBP13.45□□□□□ -0.26
CHMP1B-202ENST00000588284 FRAT1Q92837 279 aaPredicted RBP13.45□□□□□ -0.26
CHMP1B-202ENST00000588284 MIS18AQ9NYP9 233 aa13.45□□□□□ -0.26
CHMP1B-202ENST00000588284 PCDH11XQ9BZA7 1347 aa13.44□□□□□ -0.26
CHMP1B-202ENST00000588284 PCDH11YQ9BZA8 1340 aa13.44□□□□□ -0.26
CHMP1B-202ENST00000588284 BTBD11A6QL63 1104 aa13.44□□□□□ -0.26
CHMP1B-202ENST00000588284 AAMPQ13685 434 aa13.44□□□□□ -0.26
CHMP1B-202ENST00000588284 TSPYL6Q8N831 410 aa13.44□□□□□ -0.26
CHMP1B-202ENST00000588284 ARHGAP45Q92619 1136 aa13.44□□□□□ -0.26
CHMP1B-202ENST00000588284 MEGF6O75095 1541 aa13.44□□□□□ -0.26
CHMP1B-202ENST00000588284 CYP27B1O15528 508 aa13.43□□□□□ -0.26
CHMP1B-202ENST00000588284 NKX1-1Q15270 411 aaPredicted RBP13.43□□□□□ -0.26
CHMP1B-202ENST00000588284 MRPL50Q8N5N7 158 aaKnown RBP13.43□□□□□ -0.26
CHMP1B-202ENST00000588284 NGLY1Q96IV0 654 aa13.43□□□□□ -0.26
CHMP1B-202ENST00000588284 EXOC5O00471 708 aa13.42□□□□□ -0.26
CHMP1B-202ENST00000588284 HOXB7P09629 217 aa13.42□□□□□ -0.26
CHMP1B-202ENST00000588284 EXOC6Q8TAG9 804 aa13.42□□□□□ -0.26
CHMP1B-202ENST00000588284 CRBNQ96SW2 442 aa13.42□□□□□ -0.26
CHMP1B-202ENST00000588284 BCL2L13Q9BXK5 485 aa13.42□□□□□ -0.26
CHMP1B-202ENST00000588284 SLC52A2Q9HAB3 445 aa13.42□□□□□ -0.26
CHMP1B-202ENST00000588284 USP35Q9P2H5 1018 aa13.42□□□□□ -0.26
CHMP1B-202ENST00000588284 ERVV-2B6SEH9 535 aa13.41□□□□□ -0.26
CHMP1B-202ENST00000588284 CABP4P57796 275 aa13.41□□□□□ -0.26
CHMP1B-202ENST00000588284 CCDC30Q5VVM6 783 aa13.41□□□□□ -0.26
CHMP1B-202ENST00000588284 ATF7IPQ6VMQ6 1270 aa13.41□□□□□ -0.26
CHMP1B-202ENST00000588284 UNC5CLQ8IV45 518 aa13.41□□□□□ -0.26
CHMP1B-202ENST00000588284 DZIP1LQ8IYY4 767 aaKnown RBP13.41□□□□□ -0.26
CHMP1B-202ENST00000588284 PELP1Q8IZL8 1130 aaKnown RBP13.41□□□□□ -0.26
CHMP1B-202ENST00000588284 NOB1Q9ULX3 412 aaKnown RBP13.41□□□□□ -0.26
CHMP1B-202ENST00000588284 EIF4A1P60842 406 aaKnown RBP13.4□□□□□ -0.26
CHMP1B-202ENST00000588284 C20orf194Q5TEA3 1177 aa13.4□□□□□ -0.26
CHMP1B-202ENST00000588284 FTSJ3Q8IY81 847 aaKnown RBP13.4□□□□□ -0.26
CHMP1B-202ENST00000588284 DDX54Q8TDD1 881 aaKnown RBP13.4□□□□□ -0.26
CHMP1B-202ENST00000588284 CCDC136Q96JN2 1154 aa13.4□□□□□ -0.26
CHMP1B-202ENST00000588284 STK31Q9BXU1 1019 aa13.4□□□□□ -0.26
CHMP1B-202ENST00000588284 API5Q9BZZ5 524 aaKnown RBP13.4□□□□□ -0.26
CHMP1B-202ENST00000588284 CHMP4BQ9H444 224 aaKnown RBP13.4□□□□□ -0.26
CHMP1B-202ENST00000588284 SPATA31A1Q5TZJ5 1347 aa13.39□□□□□ -0.27
CHMP1B-202ENST00000588284 LRRC37A3O60309 1634 aa13.39□□□□□ -0.27
CHMP1B-202ENST00000588284 PARP4Q9UKK3 1724 aaKnown RBP13.39□□□□□ -0.27
CHMP1B-202ENST00000588284 FNBP4Q8N3X1 1017 aaPredicted RBP13.39□□□□□ -0.27
CHMP1B-202ENST00000588284 NFATC2IPQ8NCF5 419 aa13.39□□□□□ -0.27
CHMP1B-202ENST00000588284 SLIT2O94813 1529 aa13.39□□□□□ -0.27
CHMP1B-202ENST00000588284 KRT24Q2M2I5 525 aa13.38□□□□□ -0.27
CHMP1B-202ENST00000588284 BARGINQ6ZT62 677 aa13.38□□□□□ -0.27
CHMP1B-202ENST00000588284 C8orf37Q96NL8 207 aa13.38□□□□□ -0.27
CHMP1B-202ENST00000588284 CCDC9Q9Y3X0 531 aaKnown RBP13.38□□□□□ -0.27
CHMP1B-202ENST00000588284 PKD1L3Q7Z443 1732 aa13.38□□□□□ -0.27
CHMP1B-202ENST00000588284 SPATA31A5Q5VU36 1347 aa13.38□□□□□ -0.27
CHMP1B-202ENST00000588284 SPATA31A7Q8IWB4 1347 aa13.38□□□□□ -0.27
CHMP1B-202ENST00000588284 VPS72Q15906 364 aa13.37□□□□□ -0.27
CHMP1B-202ENST00000588284 MEX3CQ5U5Q3 659 aaKnown RBP13.37□□□□□ -0.27
CHMP1B-202ENST00000588284 ZNF790Q6PG37 636 aa13.37□□□□□ -0.27
CHMP1B-202ENST00000588284 TTC5Q8N0Z6 440 aa13.37□□□□□ -0.27
CHMP1B-202ENST00000588284 PANK1Q8TE04 598 aa13.37□□□□□ -0.27
CHMP1B-202ENST00000588284 PTPRCP08575 1304 aa13.37□□□□□ -0.27
CHMP1B-202ENST00000588284 TRIM27P14373 513 aa13.36□□□□□ -0.27
CHMP1B-202ENST00000588284 COG6Q9Y2V7 657 aa13.36□□□□□ -0.27
CHMP1B-202ENST00000588284 ADAMTS7Q9UKP4 1686 aa13.36□□□□□ -0.27
CHMP1B-202ENST00000588284 DISP2A7MBM2 1401 aa13.36□□□□□ -0.27
CHMP1B-202ENST00000588284 KDM6AO15550 1401 aaPredicted RBP13.36□□□□□ -0.27
CHMP1B-202ENST00000588284 NWD2Q9ULI1 1742 aa13.36□□□□□ -0.27
CHMP1B-202ENST00000588284 TCERG1O14776 1098 aaKnown RBP13.35□□□□□ -0.27
CHMP1B-202ENST00000588284 MVPQ14764 893 aaKnown RBP13.35□□□□□ -0.27
CHMP1B-202ENST00000588284 DDB1Q16531 1140 aa13.35□□□□□ -0.27
CHMP1B-202ENST00000588284 HDGFL1Q5TGJ6 251 aa13.35□□□□□ -0.27
CHMP1B-202ENST00000588284 B4GALNT3Q6L9W6 998 aa13.35□□□□□ -0.27
CHMP1B-202ENST00000588284 CLUAP1Q96AJ1 413 aa13.35□□□□□ -0.27
CHMP1B-202ENST00000588284 USP21Q9UK80 565 aa13.35□□□□□ -0.27
CHMP1B-202ENST00000588284 DDX19BQ9UMR2 479 aa13.35□□□□□ -0.27
CHMP1B-202ENST00000588284 SSUH2Q9Y2M2 353 aa13.35□□□□□ -0.27
CHMP1B-202ENST00000588284 KCNQ3O43525 872 aa13.34□□□□□ -0.27
CHMP1B-202ENST00000588284 GIGYF1O75420 1035 aaPredicted RBP13.34□□□□□ -0.27
CHMP1B-202ENST00000588284 FMNL2Q96PY5 1086 aa13.34□□□□□ -0.27
CHMP1B-202ENST00000588284 SCN11AQ9UI33 1791 aa13.34□□□□□ -0.27
CHMP1B-202ENST00000588284 PLCH1Q4KWH8 1693 aa13.34□□□□□ -0.27
CHMP1B-202ENST00000588284 HEG1Q9ULI3 1381 aa13.33□□□□□ -0.27
CHMP1B-202ENST00000588284 SNRPA1P09661 255 aaKnown RBP13.33□□□□□ -0.28
CHMP1B-202ENST00000588284 DBF4Q9UBU7 674 aaPredicted RBP13.33□□□□□ -0.28
CHMP1B-202ENST00000588284 RLBP1P12271 317 aa13.32□□□□□ -0.28
CHMP1B-202ENST00000588284 EIF2S2P20042 333 aaKnown RBP13.32□□□□□ -0.28
CHMP1B-202ENST00000588284 TMOD3Q9NYL9 352 aa13.32□□□□□ -0.28
CHMP1B-202ENST00000588284 MRC1P22897 1456 aa13.31□□□□□ -0.28
CHMP1B-202ENST00000588284 BCL9LQ86UU0 1499 aa13.31□□□□□ -0.28
CHMP1B-202ENST00000588284 KDM3BQ7LBC6 1761 aa13.31□□□□□ -0.28
CHMP1B-202ENST00000588284 SLC39A6Q13433 755 aa13.31□□□□□ -0.28
CHMP1B-202ENST00000588284 ITPRIPQ8IWB1 547 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms