RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 NBPF14Q5TI25 921 aa15.65■□□□□ 0.1
SDHDP1-201ENST00000588055 NFATC2IPQ8NCF5 419 aa15.64■□□□□ 0.09
SDHDP1-201ENST00000588055 CCNL1Q9UK58 526 aaPredicted RBP15.64■□□□□ 0.09
SDHDP1-201ENST00000588055 PAPPAQ13219 1627 aa15.64■□□□□ 0.09
SDHDP1-201ENST00000588055 CEMIPQ8WUJ3 1361 aa15.63■□□□□ 0.09
SDHDP1-201ENST00000588055 CCDC184Q52MB2 194 aa15.63■□□□□ 0.09
SDHDP1-201ENST00000588055 TTC5Q8N0Z6 440 aa15.63■□□□□ 0.09
SDHDP1-201ENST00000588055 LGR6Q9HBX8 967 aa15.63■□□□□ 0.09
SDHDP1-201ENST00000588055 C5P01031 1676 aa15.63■□□□□ 0.09
SDHDP1-201ENST00000588055 SIPA1L3O60292 1781 aaPredicted RBP15.62■□□□□ 0.09
SDHDP1-201ENST00000588055 RIPK4P57078 832 aa15.62■□□□□ 0.09
SDHDP1-201ENST00000588055 TMPOP42166 694 aaKnown RBP15.61■□□□□ 0.09
SDHDP1-201ENST00000588055 MCM10Q7L590 875 aa15.61■□□□□ 0.09
SDHDP1-201ENST00000588055 PNISRQ8TF01 805 aaKnown RBP15.61■□□□□ 0.09
SDHDP1-201ENST00000588055 ATG3Q9NT62 314 aa15.61■□□□□ 0.09
SDHDP1-201ENST00000588055 STK32BQ9NY57 414 aa15.61■□□□□ 0.09
SDHDP1-201ENST00000588055 ASAP1Q9ULH1 1129 aa15.61■□□□□ 0.09
SDHDP1-201ENST00000588055 ZNF831Q5JPB2 1677 aa15.6■□□□□ 0.09
SDHDP1-201ENST00000588055 LOC102724428A0A0B4J2F2 783 aa15.6■□□□□ 0.09
SDHDP1-201ENST00000588055 CCER2I3L3R5 266 aa15.6■□□□□ 0.09
SDHDP1-201ENST00000588055 SIK1P57059 783 aa15.6■□□□□ 0.09
SDHDP1-201ENST00000588055 NEUROD2Q15784 382 aa15.6■□□□□ 0.09
SDHDP1-201ENST00000588055 FAM9BQ8IZU0 186 aa15.6■□□□□ 0.09
SDHDP1-201ENST00000588055 IL17REQ8NFR9 667 aa15.6■□□□□ 0.09
SDHDP1-201ENST00000588055 RBM42Q9BTD8 480 aaKnown RBP15.6■□□□□ 0.09
SDHDP1-201ENST00000588055 RRP7AQ9Y3A4 280 aaKnown RBP15.59■□□□□ 0.09
SDHDP1-201ENST00000588055 UBR2Q8IWV8 1755 aa15.58■□□□□ 0.08
SDHDP1-201ENST00000588055 BTBD11A6QL63 1104 aa15.58■□□□□ 0.08
SDHDP1-201ENST00000588055 ATP6V1AP38606 617 aa15.58■□□□□ 0.08
SDHDP1-201ENST00000588055 DCTN1Q14203 1278 aa15.58■□□□□ 0.08
SDHDP1-201ENST00000588055 PROM2Q8N271 834 aa15.58■□□□□ 0.08
SDHDP1-201ENST00000588055 TAF1LQ8IZX4 1826 aa15.58■□□□□ 0.08
SDHDP1-201ENST00000588055 CICQ96RK0 1608 aaPredicted RBP15.57■□□□□ 0.08
SDHDP1-201ENST00000588055 APAF1O14727 1248 aa15.57■□□□□ 0.08
SDHDP1-201ENST00000588055 PTCD1O75127 700 aaKnown RBP15.57■□□□□ 0.08
SDHDP1-201ENST00000588055 C4BP0C0L5 1744 aa15.57■□□□□ 0.08
SDHDP1-201ENST00000588055 CALD1Q05682 793 aaKnown RBP15.56■□□□□ 0.08
SDHDP1-201ENST00000588055 R3HDM1Q15032 1099 aaKnown RBP15.56■□□□□ 0.08
SDHDP1-201ENST00000588055 AK7Q96M32 723 aa15.56■□□□□ 0.08
SDHDP1-201ENST00000588055 LRRC4BQ9NT99 713 aa15.56■□□□□ 0.08
SDHDP1-201ENST00000588055 KCPQ6ZWJ8 1503 aa15.56■□□□□ 0.08
SDHDP1-201ENST00000588055 COL5A3P25940 1745 aaPredicted RBP15.55■□□□□ 0.08
SDHDP1-201ENST00000588055 KCNQ4P56696 695 aa15.55■□□□□ 0.08
SDHDP1-201ENST00000588055 SLC39A6Q13433 755 aa15.55■□□□□ 0.08
SDHDP1-201ENST00000588055 TAF7Q15545 349 aaPredicted RBP15.55■□□□□ 0.08
SDHDP1-201ENST00000588055 ZNF790Q6PG37 636 aa15.55■□□□□ 0.08
SDHDP1-201ENST00000588055 ANO8Q9HCE9 1232 aaPredicted RBP15.55■□□□□ 0.08
SDHDP1-201ENST00000588055 KDM3BQ7LBC6 1761 aa15.54■□□□□ 0.08
SDHDP1-201ENST00000588055 TJP1Q07157 1748 aa15.54■□□□□ 0.08
SDHDP1-201ENST00000588055 QSER1Q2KHR3 1735 aa15.54■□□□□ 0.08
SDHDP1-201ENST00000588055 SLC15A2Q16348 729 aa15.54■□□□□ 0.08
SDHDP1-201ENST00000588055 FMNL2Q96PY5 1086 aa15.54■□□□□ 0.08
SDHDP1-201ENST00000588055 THUMPD2Q9BTF0 503 aaKnown RBP15.54■□□□□ 0.08
SDHDP1-201ENST00000588055 TFCP2L1Q9NZI6 479 aa15.54■□□□□ 0.08
SDHDP1-201ENST00000588055 PSDA5PKW4 1024 aaPredicted RBP15.53■□□□□ 0.08
SDHDP1-201ENST00000588055 VSIG10Q8N0Z9 540 aa15.52■□□□□ 0.08
SDHDP1-201ENST00000588055 MIER1Q8N108 512 aa15.52■□□□□ 0.08
SDHDP1-201ENST00000588055 TSPYL4Q9UJ04 414 aa15.52■□□□□ 0.08
SDHDP1-201ENST00000588055 TUBGCP6Q96RT7 1819 aa15.52■□□□□ 0.07
SDHDP1-201ENST00000588055 HEG1Q9ULI3 1381 aa15.51■□□□□ 0.07
SDHDP1-201ENST00000588055 ZNF827Q17R98 1081 aa15.51■□□□□ 0.07
SDHDP1-201ENST00000588055 LINC00116Q8NCU8 138 aa15.51■□□□□ 0.07
SDHDP1-201ENST00000588055 BABAM1Q9NWV8 329 aa15.51■□□□□ 0.07
SDHDP1-201ENST00000588055 TRIM35Q9UPQ4 493 aa15.51■□□□□ 0.07
SDHDP1-201ENST00000588055 CNTNAP4Q9C0A0 1308 aa15.5■□□□□ 0.07
SDHDP1-201ENST00000588055 LAMB4A4D0S4 1761 aa15.5■□□□□ 0.07
SDHDP1-201ENST00000588055 GNPATO15228 680 aa15.5■□□□□ 0.07
SDHDP1-201ENST00000588055 ITPK1Q13572 414 aa15.5■□□□□ 0.07
SDHDP1-201ENST00000588055 NGEFQ8N5V2 710 aa15.5■□□□□ 0.07
SDHDP1-201ENST00000588055 FLAD1Q8NFF5 587 aa15.5■□□□□ 0.07
SDHDP1-201ENST00000588055 AKT1S1Q96B36 256 aa15.5■□□□□ 0.07
SDHDP1-201ENST00000588055 TEX13AQ9BXU3 409 aaPredicted RBP15.5■□□□□ 0.07
SDHDP1-201ENST00000588055 LAS1LQ9Y4W2 734 aaKnown RBP15.5■□□□□ 0.07
SDHDP1-201ENST00000588055 UBR3Q6ZT12 1888 aa15.49■□□□□ 0.07
SDHDP1-201ENST00000588055 STARD3NLO95772 234 aa15.49■□□□□ 0.07
SDHDP1-201ENST00000588055 ZNF496Q96IT1 587 aaPredicted RBP15.49■□□□□ 0.07
SDHDP1-201ENST00000588055 CASZ1Q86V15 1759 aa15.49■□□□□ 0.07
SDHDP1-201ENST00000588055 MSH5O43196 834 aa15.48■□□□□ 0.07
SDHDP1-201ENST00000588055 CCDC27Q2M243 656 aa15.48■□□□□ 0.07
SDHDP1-201ENST00000588055 NCBP3Q53F19 620 aaKnown RBP15.48■□□□□ 0.07
SDHDP1-201ENST00000588055 DNAJC10Q8IXB1 793 aa15.48■□□□□ 0.07
SDHDP1-201ENST00000588055 SLC4A9Q96Q91 983 aa15.48■□□□□ 0.07
SDHDP1-201ENST00000588055 PHF14O94880 888 aa15.47■□□□□ 0.07
SDHDP1-201ENST00000588055 SNRPA1P09661 255 aaKnown RBP15.47■□□□□ 0.07
SDHDP1-201ENST00000588055 SSFA2P28290 1259 aa15.47■□□□□ 0.07
SDHDP1-201ENST00000588055 CRKLP46109 303 aaKnown RBP15.47■□□□□ 0.07
SDHDP1-201ENST00000588055 GNAI1P63096 354 aa15.47■□□□□ 0.07
SDHDP1-201ENST00000588055 RC3H1Q5TC82 1133 aaKnown RBP15.47■□□□□ 0.07
SDHDP1-201ENST00000588055 NPM2Q86SE8 214 aaKnown RBP15.47■□□□□ 0.07
SDHDP1-201ENST00000588055 MIS18AQ9NYP9 233 aa15.47■□□□□ 0.07
SDHDP1-201ENST00000588055 RTCBQ9Y3I0 505 aaKnown RBP15.47■□□□□ 0.07
SDHDP1-201ENST00000588055 KCNQ3O43525 872 aa15.46■□□□□ 0.07
SDHDP1-201ENST00000588055 CFAP44Q96MT7 982 aa15.46■□□□□ 0.07
SDHDP1-201ENST00000588055 CCDC87Q9NVE4 849 aa15.46■□□□□ 0.07
SDHDP1-201ENST00000588055 IFT57Q9NWB7 429 aa15.46■□□□□ 0.07
SDHDP1-201ENST00000588055 PNPLA7Q6ZV29 1317 aa15.45■□□□□ 0.06
SDHDP1-201ENST00000588055 SENP3-EIF4A1A0A087X0R7 540 aa15.45■□□□□ 0.06
SDHDP1-201ENST00000588055 ADRA2BP18089 450 aa15.45■□□□□ 0.06
SDHDP1-201ENST00000588055 SALL2Q9Y467 1007 aaPredicted RBP15.45■□□□□ 0.06
SDHDP1-201ENST00000588055 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms