RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 ZNF579Q8NAF0 562 aaKnown RBP11.54□□□□□ -0.56
NEDD4L-218ENST00000587547 KIF3CO14782 793 aa11.53□□□□□ -0.56
NEDD4L-218ENST00000587547 CSB-PGBD3P0DP91 1061 aa11.53□□□□□ -0.56
NEDD4L-218ENST00000587547 KCNQ4P56696 695 aa11.53□□□□□ -0.56
NEDD4L-218ENST00000587547 DNAJC5GQ8N7S2 189 aa11.53□□□□□ -0.56
NEDD4L-218ENST00000587547 PIK3C2AO00443 1686 aa11.52□□□□□ -0.56
NEDD4L-218ENST00000587547 NSD3Q9BZ95 1437 aa11.52□□□□□ -0.56
NEDD4L-218ENST00000587547 QSER1Q2KHR3 1735 aa11.52□□□□□ -0.56
NEDD4L-218ENST00000587547 ABCC6O95255 1503 aa11.52□□□□□ -0.57
NEDD4L-218ENST00000587547 TUBGCP6Q96RT7 1819 aa11.52□□□□□ -0.57
NEDD4L-218ENST00000587547 PSEN1P49768 467 aa11.52□□□□□ -0.57
NEDD4L-218ENST00000587547 ARHGEF25Q86VW2 580 aa11.52□□□□□ -0.57
NEDD4L-218ENST00000587547 PIP4P2Q8N4L2 257 aa11.52□□□□□ -0.57
NEDD4L-218ENST00000587547 MAP2P11137 1827 aaKnown RBP11.51□□□□□ -0.57
NEDD4L-218ENST00000587547 APLP1P51693 650 aa11.51□□□□□ -0.57
NEDD4L-218ENST00000587547 CNGB1Q14028 1251 aaPredicted RBP11.51□□□□□ -0.57
NEDD4L-218ENST00000587547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.51□□□□□ -0.572e-6■■■□□ 18.5
NEDD4L-218ENST00000587547 TFCP2L1Q9NZI6 479 aa11.51□□□□□ -0.57
NEDD4L-218ENST00000587547 RGPD5Q99666 1765 aa11.51□□□□□ -0.57
NEDD4L-218ENST00000587547 EDC4Q6P2E9 1401 aaKnown RBP11.51□□□□□ -0.57
NEDD4L-218ENST00000587547 SOX12O15370 315 aa11.5□□□□□ -0.57
NEDD4L-218ENST00000587547 CARD14Q9BXL6 1004 aa11.5□□□□□ -0.57
NEDD4L-218ENST00000587547 KNSTRNQ9Y448 316 aa11.5□□□□□ -0.57
NEDD4L-218ENST00000587547 MSL1Q68DK7 614 aa11.49□□□□□ -0.57
NEDD4L-218ENST00000587547 SLC27A3Q5K4L6 730 aa11.48□□□□□ -0.57
NEDD4L-218ENST00000587547 IFNL1Q8IU54 200 aa11.48□□□□□ -0.57
NEDD4L-218ENST00000587547 WWC3Q9ULE0 1092 aa11.48□□□□□ -0.57
NEDD4L-218ENST00000587547 TTC21BQ7Z4L5 1316 aa11.48□□□□□ -0.57
NEDD4L-218ENST00000587547 USP54Q70EL1 1684 aa11.48□□□□□ -0.57
NEDD4L-218ENST00000587547 LTN1O94822 1766 aa11.48□□□□□ -0.57
NEDD4L-218ENST00000587547 MAP3K13O43283 966 aa11.47□□□□□ -0.57
NEDD4L-218ENST00000587547 PRELPP51888 382 aa11.47□□□□□ -0.57
NEDD4L-218ENST00000587547 NME9Q86XW9 330 aa11.47□□□□□ -0.57
NEDD4L-218ENST00000587547 NFAT5O94916 1531 aa11.46□□□□□ -0.57
NEDD4L-218ENST00000587547 CGNL1Q0VF96 1302 aa11.46□□□□□ -0.57
NEDD4L-218ENST00000587547 TTC21AQ8NDW8 1320 aa11.46□□□□□ -0.57
NEDD4L-218ENST00000587547 CC2D1BQ5T0F9 858 aaKnown RBP11.46□□□□□ -0.57
NEDD4L-218ENST00000587547 COL23A1Q86Y22 540 aaPredicted RBP11.46□□□□□ -0.57
NEDD4L-218ENST00000587547 KIF12Q96FN5 646 aa11.46□□□□□ -0.57
NEDD4L-218ENST00000587547 PER1O15534 1290 aaPredicted RBP11.45□□□□□ -0.58
NEDD4L-218ENST00000587547 IL2RBP14784 551 aa11.45□□□□□ -0.58
NEDD4L-218ENST00000587547 HTRA3P83110 453 aa11.45□□□□□ -0.58
NEDD4L-218ENST00000587547 TNS4Q8IZW8 715 aa11.45□□□□□ -0.58
NEDD4L-218ENST00000587547 MFRPQ9BY79 579 aa11.45□□□□□ -0.58
NEDD4L-218ENST00000587547 GGNBP2Q9H3C7 697 aa11.45□□□□□ -0.58
NEDD4L-218ENST00000587547 CD2APQ9Y5K6 639 aa11.45□□□□□ -0.58
NEDD4L-218ENST00000587547 KCNH5Q8NCM2 988 aa11.44□□□□□ -0.58
NEDD4L-218ENST00000587547 NLRP2Q9NX02 1062 aa11.44□□□□□ -0.58
NEDD4L-218ENST00000587547 KAT6BQ8WYB5 2073 aa11.44□□□□□ -0.58
NEDD4L-218ENST00000587547 ERBB3P21860 1342 aa11.43□□□□□ -0.58
NEDD4L-218ENST00000587547 FYB1O15117 783 aa11.43□□□□□ -0.58
NEDD4L-218ENST00000587547 DIEXFQ68CQ4 756 aaKnown RBP11.43□□□□□ -0.58
NEDD4L-218ENST00000587547 NSD2O96028 1365 aa11.42□□□□□ -0.58
NEDD4L-218ENST00000587547 IGSF1Q8N6C5 1336 aa11.42□□□□□ -0.58
NEDD4L-218ENST00000587547 TOMM70O94826 608 aa11.42□□□□□ -0.58
NEDD4L-218ENST00000587547 MORC1Q86VD1 984 aa11.42□□□□□ -0.58
NEDD4L-218ENST00000587547 JMYQ8N9B5 988 aa11.42□□□□□ -0.58
NEDD4L-218ENST00000587547 KLRG1Q96E93 195 aa11.42□□□□□ -0.58
NEDD4L-218ENST00000587547 COG3Q96JB2 828 aa11.42□□□□□ -0.58
NEDD4L-218ENST00000587547 WDR90Q96KV7 1748 aa11.42□□□□□ -0.58
NEDD4L-218ENST00000587547 TNNT2P45379 298 aaPredicted RBP11.41□□□□□ -0.58
NEDD4L-218ENST00000587547 DDX54Q8TDD1 881 aaKnown RBP11.41□□□□□ -0.58
NEDD4L-218ENST00000587547 SYTL4Q96C24 671 aaPredicted RBP11.41□□□□□ -0.58
NEDD4L-218ENST00000587547 CCNL1Q9UK58 526 aaPredicted RBP11.41□□□□□ -0.58
NEDD4L-218ENST00000587547 USP31Q70CQ4 1352 aa11.41□□□□□ -0.58
NEDD4L-218ENST00000587547 LY75O60449 1722 aa11.4□□□□□ -0.58
NEDD4L-218ENST00000587547 SLC34A2O95436 690 aa11.4□□□□□ -0.58
NEDD4L-218ENST00000587547 PRIM1P49642 420 aaKnown RBP11.4□□□□□ -0.58
NEDD4L-218ENST00000587547 NMRK2Q9NPI5 230 aa11.4□□□□□ -0.58
NEDD4L-218ENST00000587547 NPC1L1Q9UHC9 1359 aa11.4□□□□□ -0.59
NEDD4L-218ENST00000587547 ANP32CO43423 234 aa11.39□□□□□ -0.59
NEDD4L-218ENST00000587547 EFCAB3Q8N7B9 438 aa11.39□□□□□ -0.59
NEDD4L-218ENST00000587547 CD44P16070 742 aaKnown RBP11.38□□□□□ -0.59
NEDD4L-218ENST00000587547 ANKRD24Q8TF21 1146 aa11.38□□□□□ -0.59
NEDD4L-218ENST00000587547 CICQ96RK0 1608 aaPredicted RBP11.38□□□□□ -0.59
NEDD4L-218ENST00000587547 DOT1LQ8TEK3 1739 aa11.38□□□□□ -0.59
NEDD4L-218ENST00000587547 RGPD2P0DJD1 1756 aa11.37□□□□□ -0.59
NEDD4L-218ENST00000587547 FBLN1P23142 703 aa11.37□□□□□ -0.59
NEDD4L-218ENST00000587547 PCNTO95613 3336 aa11.37□□□□□ -0.59
NEDD4L-218ENST00000587547 RALBP1Q15311 655 aa11.36□□□□□ -0.59
NEDD4L-218ENST00000587547 AMIGO3Q86WK7 504 aa11.36□□□□□ -0.59
NEDD4L-218ENST00000587547 PRKRIP1Q9H875 184 aaPredicted RBP11.36□□□□□ -0.59
NEDD4L-218ENST00000587547 SMIM5Q71RC9 77 aa11.35□□□□□ -0.59
NEDD4L-218ENST00000587547 FBXO22Q8NEZ5 403 aa11.35□□□□□ -0.59
NEDD4L-218ENST00000587547 RBM46Q8TBY0 533 aaKnown RBP11.35□□□□□ -0.59
NEDD4L-218ENST00000587547 PHF12Q96QT6 1004 aa11.35□□□□□ -0.59
NEDD4L-218ENST00000587547 WDR70Q9NW82 654 aa11.35□□□□□ -0.59
NEDD4L-218ENST00000587547 PPM1GO15355 546 aaPredicted RBP11.34□□□□□ -0.59
NEDD4L-218ENST00000587547 PPP1R37O75864 691 aa11.34□□□□□ -0.59
NEDD4L-218ENST00000587547 RRS1Q15050 365 aaKnown RBP11.34□□□□□ -0.59
NEDD4L-218ENST00000587547 PPP2R1AP30153 589 aa11.33□□□□□ -0.6
NEDD4L-218ENST00000587547 EMILIN1Q9Y6C2 1016 aa11.33□□□□□ -0.6
NEDD4L-218ENST00000587547 C5P01031 1676 aa11.33□□□□□ -0.6
NEDD4L-218ENST00000587547 MYBBP1AQ9BQG0 1328 aaKnown RBP11.33□□□□□ -0.6
NEDD4L-218ENST00000587547 TOGARAM1Q9Y4F4 1720 aa11.32□□□□□ -0.6
NEDD4L-218ENST00000587547 HSPA1AP0DMV8 641 aaKnown RBP11.32□□□□□ -0.6
NEDD4L-218ENST00000587547 HSPA1BP0DMV9 641 aaKnown RBP11.32□□□□□ -0.6
NEDD4L-218ENST00000587547 AMPHP49418 695 aa11.32□□□□□ -0.6
NEDD4L-218ENST00000587547 MAP3K19Q56UN5 1328 aa11.32□□□□□ -0.6
NEDD4L-218ENST00000587547 FLAD1Q8NFF5 587 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms