RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 GAS2L2Q8NHY3 880 aa13.18□□□□□ -0.3
APOC1-201ENST00000586638 NUP188Q5SRE5 1749 aa13.18□□□□□ -0.3
APOC1-201ENST00000586638 MAP3K5Q99683 1374 aa13.18□□□□□ -0.3
APOC1-201ENST00000586638 PKD1L3Q7Z443 1732 aa13.17□□□□□ -0.3
APOC1-201ENST00000586638 PARP4Q9UKK3 1724 aaKnown RBP13.17□□□□□ -0.3
APOC1-201ENST00000586638 BCAR3O75815 825 aa13.17□□□□□ -0.3
APOC1-201ENST00000586638 SLC15A2Q16348 729 aa13.17□□□□□ -0.3
APOC1-201ENST00000586638 ERICH6BQ5W0A0 696 aa13.17□□□□□ -0.3
APOC1-201ENST00000586638 MCM10Q7L590 875 aa13.17□□□□□ -0.3
APOC1-201ENST00000586638 IFT57Q9NWB7 429 aa13.17□□□□□ -0.3
APOC1-201ENST00000586638 CEP350Q5VT06 3117 aa13.16□□□□□ -0.3
APOC1-201ENST00000586638 PTGER2P43116 358 aa13.16□□□□□ -0.3
APOC1-201ENST00000586638 C20orf194Q5TEA3 1177 aa13.16□□□□□ -0.3
APOC1-201ENST00000586638 MEGF6O75095 1541 aa13.16□□□□□ -0.3
APOC1-201ENST00000586638 BCL9O00512 1426 aa13.15□□□□□ -0.3
APOC1-201ENST00000586638 ZNF853P0CG23 659 aa13.15□□□□□ -0.3
APOC1-201ENST00000586638 RARSP54136 660 aaKnown RBP13.15□□□□□ -0.3
APOC1-201ENST00000586638 GNAI1P63096 354 aa13.15□□□□□ -0.3
APOC1-201ENST00000586638 EXOC6Q8TAG9 804 aa13.15□□□□□ -0.3
APOC1-201ENST00000586638 BCL2L13Q9BXK5 485 aa13.15□□□□□ -0.3
APOC1-201ENST00000586638 MBIPQ9NS73 344 aa13.15□□□□□ -0.3
APOC1-201ENST00000586638 PPP4R2Q9NY27 417 aa13.15□□□□□ -0.3
APOC1-201ENST00000586638 KDM3BQ7LBC6 1761 aa13.15□□□□□ -0.31
APOC1-201ENST00000586638 CRBNQ96SW2 442 aa13.14□□□□□ -0.31
APOC1-201ENST00000586638 SYT17Q9BSW7 474 aa13.14□□□□□ -0.31
APOC1-201ENST00000586638 SIPA1L3O60292 1781 aaPredicted RBP13.13□□□□□ -0.31
APOC1-201ENST00000586638 ADAMTS7Q9UKP4 1686 aa13.13□□□□□ -0.31
APOC1-201ENST00000586638 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.13□□□□□ -0.31
APOC1-201ENST00000586638 RTF1Q92541 710 aaKnown RBP13.13□□□□□ -0.31
APOC1-201ENST00000586638 FHDC1Q9C0D6 1143 aaPredicted RBP13.13□□□□□ -0.31
APOC1-201ENST00000586638 MTFR1LQ9H019 292 aa13.13□□□□□ -0.31
APOC1-201ENST00000586638 NLRP2Q9NX02 1062 aa13.13□□□□□ -0.31
APOC1-201ENST00000586638 WNK3Q9BYP7 1800 aa13.13□□□□□ -0.31
APOC1-201ENST00000586638 SCN11AQ9UI33 1791 aa13.12□□□□□ -0.31
APOC1-201ENST00000586638 GNAT3A8MTJ3 354 aa13.12□□□□□ -0.31
APOC1-201ENST00000586638 CT47B1P0C2W7 299 aaPredicted RBP13.12□□□□□ -0.31
APOC1-201ENST00000586638 ZNF530Q6P9A1 599 aaPredicted RBP13.12□□□□□ -0.31
APOC1-201ENST00000586638 ACSBG1Q96GR2 724 aa13.12□□□□□ -0.31
APOC1-201ENST00000586638 CFAP44Q96MT7 982 aa13.12□□□□□ -0.31
APOC1-201ENST00000586638 SHANK3Q9BYB0 1731 aa13.12□□□□□ -0.31
APOC1-201ENST00000586638 CANXP27824 592 aaKnown RBP13.11□□□□□ -0.31
APOC1-201ENST00000586638 B4GALNT3Q6L9W6 998 aa13.11□□□□□ -0.31
APOC1-201ENST00000586638 ZNF784Q8NCA9 323 aaPredicted RBP13.11□□□□□ -0.31
APOC1-201ENST00000586638 UTRNP46939 3433 aa13.1□□□□□ -0.31
APOC1-201ENST00000586638 PLEKHO1Q53GL0 409 aaPredicted RBP13.1□□□□□ -0.31
APOC1-201ENST00000586638 TSPYL6Q8N831 410 aa13.1□□□□□ -0.31
APOC1-201ENST00000586638 SMC4Q9NTJ3 1288 aa13.1□□□□□ -0.31
APOC1-201ENST00000586638 TNNQ9UQP3 1299 aa13.1□□□□□ -0.31
APOC1-201ENST00000586638 HTATSF1O43719 755 aaKnown RBP13.09□□□□□ -0.31
APOC1-201ENST00000586638 SSH1Q8WYL5 1049 aa13.09□□□□□ -0.31
APOC1-201ENST00000586638 FRAT1Q92837 279 aaPredicted RBP13.09□□□□□ -0.31
APOC1-201ENST00000586638 ARXQ96QS3 562 aa13.09□□□□□ -0.31
APOC1-201ENST00000586638 SGIP1Q9BQI5 828 aa13.09□□□□□ -0.31
APOC1-201ENST00000586638 CHL1O00533 1208 aa13.08□□□□□ -0.32
APOC1-201ENST00000586638 IL2RBP14784 551 aa13.08□□□□□ -0.32
APOC1-201ENST00000586638 TATP17735 454 aaPredicted RBP13.08□□□□□ -0.32
APOC1-201ENST00000586638 KRT24Q2M2I5 525 aa13.08□□□□□ -0.32
APOC1-201ENST00000586638 AMOTQ4VCS5 1084 aa13.08□□□□□ -0.32
APOC1-201ENST00000586638 C8orf58Q8NAV2 365 aa13.08□□□□□ -0.32
APOC1-201ENST00000586638 RAPGEF4Q8WZA2 1011 aa13.08□□□□□ -0.32
APOC1-201ENST00000586638 CEMIPQ8WUJ3 1361 aa13.07□□□□□ -0.32
APOC1-201ENST00000586638 SBF2Q86WG5 1849 aa13.07□□□□□ -0.32
APOC1-201ENST00000586638 ELL2O00472 640 aaPredicted RBP13.07□□□□□ -0.32
APOC1-201ENST00000586638 TWISTNBQ3B726 338 aaPredicted RBP13.07□□□□□ -0.32
APOC1-201ENST00000586638 AKAP4Q5JQC9 854 aa13.07□□□□□ -0.32
APOC1-201ENST00000586638 IL17REQ8NFR9 667 aa13.07□□□□□ -0.32
APOC1-201ENST00000586638 MIS18AQ9NYP9 233 aa13.07□□□□□ -0.32
APOC1-201ENST00000586638 TSPYL4Q9UJ04 414 aa13.07□□□□□ -0.32
APOC1-201ENST00000586638 RGPD3A6NKT7 1758 aaPredicted RBP13.07□□□□□ -0.32
APOC1-201ENST00000586638 RGPD4Q7Z3J3 1758 aa13.07□□□□□ -0.32
APOC1-201ENST00000586638 KDM6AO15550 1401 aaPredicted RBP13.06□□□□□ -0.32
APOC1-201ENST00000586638 VAMP4O75379 141 aa13.06□□□□□ -0.32
APOC1-201ENST00000586638 C1orf141Q5JVX7 400 aa13.06□□□□□ -0.32
APOC1-201ENST00000586638 PANK1Q8TE04 598 aa13.06□□□□□ -0.32
APOC1-201ENST00000586638 PLEKHG2Q9H7P9 1386 aa13.06□□□□□ -0.32
APOC1-201ENST00000586638 CASZ1Q86V15 1759 aa13.05□□□□□ -0.32
APOC1-201ENST00000586638 TCERG1O14776 1098 aaKnown RBP13.05□□□□□ -0.32
APOC1-201ENST00000586638 RNMTO43148 476 aaKnown RBP13.05□□□□□ -0.32
APOC1-201ENST00000586638 GPR162Q16538 588 aa13.05□□□□□ -0.32
APOC1-201ENST00000586638 ALDH1L2Q3SY69 923 aa13.05□□□□□ -0.32
APOC1-201ENST00000586638 CCDC136Q96JN2 1154 aa13.05□□□□□ -0.32
APOC1-201ENST00000586638 LGR6Q9HBX8 967 aa13.05□□□□□ -0.32
APOC1-201ENST00000586638 LRRC4BQ9NT99 713 aa13.05□□□□□ -0.32
APOC1-201ENST00000586638 KIF16BQ96L93 1317 aa13.05□□□□□ -0.32
APOC1-201ENST00000586638 TNS2Q63HR2 1409 aa13.05□□□□□ -0.32
APOC1-201ENST00000586638 MRC1P22897 1456 aa13.04□□□□□ -0.32
APOC1-201ENST00000586638 RLBP1P12271 317 aa13.04□□□□□ -0.32
APOC1-201ENST00000586638 PDE3AQ14432 1141 aa13.04□□□□□ -0.32
APOC1-201ENST00000586638 MPRIPQ6WCQ1 1025 aa13.04□□□□□ -0.32
APOC1-201ENST00000586638 DDX54Q8TDD1 881 aaKnown RBP13.04□□□□□ -0.32
APOC1-201ENST00000586638 SLC16A10Q8TF71 515 aa13.04□□□□□ -0.32
APOC1-201ENST00000586638 C5P01031 1676 aa13.03□□□□□ -0.32
APOC1-201ENST00000586638 TOGARAM1Q9Y4F4 1720 aa13.03□□□□□ -0.32
APOC1-201ENST00000586638 ZNF827Q17R98 1081 aa13.03□□□□□ -0.32
APOC1-201ENST00000586638 ZKSCAN2Q63HK3 967 aa13.03□□□□□ -0.32
APOC1-201ENST00000586638 MRPL50Q8N5N7 158 aaKnown RBP13.03□□□□□ -0.32
APOC1-201ENST00000586638 CLUAP1Q96AJ1 413 aa13.03□□□□□ -0.32
APOC1-201ENST00000586638 COG6Q9Y2V7 657 aa13.03□□□□□ -0.32
APOC1-201ENST00000586638 TRIM27P14373 513 aa13.02□□□□□ -0.33
APOC1-201ENST00000586638 POLD1P28340 1107 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms