RNA–Protein interactions for RNA: ENST00000586002.3

PCSK4-203, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 3

Gene PCSK4, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-203ENST00000586002 ITGB4P16144 1822 aa22.99■■□□□ 1.27
PCSK4-203ENST00000586002 APAF1O14727 1248 aa22.99■■□□□ 1.27
PCSK4-203ENST00000586002 HMGB2P26583 209 aaKnown RBP22.99■■□□□ 1.27
PCSK4-203ENST00000586002 LMOD3Q0VAK6 560 aa22.99■■□□□ 1.27
PCSK4-203ENST00000586002 DCTN1Q14203 1278 aa22.99■■□□□ 1.27
PCSK4-203ENST00000586002 CEMIPQ8WUJ3 1361 aa22.99■■□□□ 1.27
PCSK4-203ENST00000586002 TOGARAM1Q9Y4F4 1720 aa22.99■■□□□ 1.27
PCSK4-203ENST00000586002 RRP7AQ9Y3A4 280 aaKnown RBP22.98■■□□□ 1.27
PCSK4-203ENST00000586002 NBPF14Q5TI25 921 aa22.97■■□□□ 1.27
PCSK4-203ENST00000586002 PALLDQ8WX93 1383 aa22.97■■□□□ 1.27
PCSK4-203ENST00000586002 SCN11AQ9UI33 1791 aa22.96■■□□□ 1.27
PCSK4-203ENST00000586002 TAF7Q15545 349 aaPredicted RBP22.96■■□□□ 1.27
PCSK4-203ENST00000586002 CCNL1Q9UK58 526 aaPredicted RBP22.96■■□□□ 1.27
PCSK4-203ENST00000586002 LRRC4BQ9NT99 713 aa22.95■■□□□ 1.26
PCSK4-203ENST00000586002 LOC102724428A0A0B4J2F2 783 aa22.94■■□□□ 1.26
PCSK4-203ENST00000586002 SIK1P57059 783 aa22.94■■□□□ 1.26
PCSK4-203ENST00000586002 SLC39A6Q13433 755 aa22.94■■□□□ 1.26
PCSK4-203ENST00000586002 RBM42Q9BTD8 480 aaKnown RBP22.94■■□□□ 1.26
PCSK4-203ENST00000586002 BTBD11A6QL63 1104 aa22.93■■□□□ 1.26
PCSK4-203ENST00000586002 TRIM35Q9UPQ4 493 aa22.93■■□□□ 1.26
PCSK4-203ENST00000586002 ADAMTS7Q9UKP4 1686 aa22.93■■□□□ 1.26
PCSK4-203ENST00000586002 KCNQ4P56696 695 aa22.92■■□□□ 1.26
PCSK4-203ENST00000586002 PTCD1O75127 700 aaKnown RBP22.91■■□□□ 1.26
PCSK4-203ENST00000586002 ATP6V1AP38606 617 aa22.91■■□□□ 1.26
PCSK4-203ENST00000586002 TTC5Q8N0Z6 440 aa22.91■■□□□ 1.26
PCSK4-203ENST00000586002 THUMPD2Q9BTF0 503 aaKnown RBP22.91■■□□□ 1.26
PCSK4-203ENST00000586002 RGPD3A6NKT7 1758 aaPredicted RBP22.91■■□□□ 1.26
PCSK4-203ENST00000586002 RGPD4Q7Z3J3 1758 aa22.91■■□□□ 1.26
PCSK4-203ENST00000586002 MRC1P22897 1456 aa22.91■■□□□ 1.26
PCSK4-203ENST00000586002 NCBP3Q53F19 620 aaKnown RBP22.9■■□□□ 1.26
PCSK4-203ENST00000586002 ZNF790Q6PG37 636 aa22.9■■□□□ 1.26
PCSK4-203ENST00000586002 SLC4A9Q96Q91 983 aa22.88■■□□□ 1.25
PCSK4-203ENST00000586002 STK32BQ9NY57 414 aa22.88■■□□□ 1.25
PCSK4-203ENST00000586002 DLG5Q8TDM6 1919 aa22.88■■□□□ 1.25
PCSK4-203ENST00000586002 SLC15A2Q16348 729 aa22.86■■□□□ 1.25
PCSK4-203ENST00000586002 BABAM1Q9NWV8 329 aa22.86■■□□□ 1.25
PCSK4-203ENST00000586002 MIS18AQ9NYP9 233 aa22.86■■□□□ 1.25
PCSK4-203ENST00000586002 VIRMAQ69YN4 1812 aaKnown RBP22.86■■□□□ 1.25
PCSK4-203ENST00000586002 KCNQ3O43525 872 aa22.85■■□□□ 1.25
PCSK4-203ENST00000586002 ITPK1Q13572 414 aa22.85■■□□□ 1.25
PCSK4-203ENST00000586002 CCDC27Q2M243 656 aa22.85■■□□□ 1.25
PCSK4-203ENST00000586002 VSIG10Q8N0Z9 540 aa22.85■■□□□ 1.25
PCSK4-203ENST00000586002 NGEFQ8N5V2 710 aa22.85■■□□□ 1.25
PCSK4-203ENST00000586002 LY75O60449 1722 aa22.85■■□□□ 1.25
PCSK4-203ENST00000586002 CALD1Q05682 793 aaKnown RBP22.84■■□□□ 1.25
PCSK4-203ENST00000586002 R3HDM1Q15032 1099 aaKnown RBP22.84■■□□□ 1.25
PCSK4-203ENST00000586002 AKT1S1Q96B36 256 aa22.84■■□□□ 1.25
PCSK4-203ENST00000586002 ZNF496Q96IT1 587 aaPredicted RBP22.84■■□□□ 1.25
PCSK4-203ENST00000586002 FMNL2Q96PY5 1086 aa22.84■■□□□ 1.25
PCSK4-203ENST00000586002 ANO8Q9HCE9 1232 aaPredicted RBP22.84■■□□□ 1.25
PCSK4-203ENST00000586002 RREB1Q92766 1687 aa22.84■■□□□ 1.25
PCSK4-203ENST00000586002 SENP3-EIF4A1A0A087X0R7 540 aa22.83■■□□□ 1.25
PCSK4-203ENST00000586002 TEX13AQ9BXU3 409 aaPredicted RBP22.83■■□□□ 1.25
PCSK4-203ENST00000586002 LINC00116Q8NCU8 138 aa22.82■■□□□ 1.24
PCSK4-203ENST00000586002 TSPYL4Q9UJ04 414 aa22.82■■□□□ 1.24
PCSK4-203ENST00000586002 CHL1O00533 1208 aa22.81■■□□□ 1.24
PCSK4-203ENST00000586002 RC3H1Q5TC82 1133 aaKnown RBP22.81■■□□□ 1.24
PCSK4-203ENST00000586002 WWC1Q8IX03 1113 aa22.81■■□□□ 1.24
PCSK4-203ENST00000586002 SALL2Q9Y467 1007 aaPredicted RBP22.81■■□□□ 1.24
PCSK4-203ENST00000586002 LAS1LQ9Y4W2 734 aaKnown RBP22.81■■□□□ 1.24
PCSK4-203ENST00000586002 PSDA5PKW4 1024 aaPredicted RBP22.8■■□□□ 1.24
PCSK4-203ENST00000586002 ZNF827Q17R98 1081 aa22.8■■□□□ 1.24
PCSK4-203ENST00000586002 DNAJC10Q8IXB1 793 aa22.8■■□□□ 1.24
PCSK4-203ENST00000586002 CFAP44Q96MT7 982 aa22.8■■□□□ 1.24
PCSK4-203ENST00000586002 TFCP2L1Q9NZI6 479 aa22.8■■□□□ 1.24
PCSK4-203ENST00000586002 NUP188Q5SRE5 1749 aa22.79■■□□□ 1.24
PCSK4-203ENST00000586002 HEG1Q9ULI3 1381 aa22.79■■□□□ 1.24
PCSK4-203ENST00000586002 AK7Q96M32 723 aa22.79■■□□□ 1.24
PCSK4-203ENST00000586002 SIPA1L3O60292 1781 aaPredicted RBP22.78■■□□□ 1.24
PCSK4-203ENST00000586002 STARD3NLO95772 234 aa22.78■■□□□ 1.24
PCSK4-203ENST00000586002 SNRPA1P09661 255 aaKnown RBP22.78■■□□□ 1.24
PCSK4-203ENST00000586002 EIF4A1P60842 406 aaKnown RBP22.78■■□□□ 1.24
PCSK4-203ENST00000586002 GNAI1P63096 354 aa22.78■■□□□ 1.24
PCSK4-203ENST00000586002 ZNF853P0CG23 659 aa22.77■■□□□ 1.24
PCSK4-203ENST00000586002 IFT57Q9NWB7 429 aa22.77■■□□□ 1.24
PCSK4-203ENST00000586002 CYP19A1P11511 503 aaPredicted RBP22.76■■□□□ 1.23
PCSK4-203ENST00000586002 WDR63Q8IWG1 891 aa22.76■■□□□ 1.23
PCSK4-203ENST00000586002 FLAD1Q8NFF5 587 aa22.76■■□□□ 1.23
PCSK4-203ENST00000586002 KCPQ6ZWJ8 1503 aa22.76■■□□□ 1.23
PCSK4-203ENST00000586002 CRKLP46109 303 aaKnown RBP22.75■■□□□ 1.23
PCSK4-203ENST00000586002 CNTNAP4Q9C0A0 1308 aa22.75■■□□□ 1.23
PCSK4-203ENST00000586002 RPS6KA4O75676 772 aa22.74■■□□□ 1.23
PCSK4-203ENST00000586002 IL16Q14005 1332 aa22.74■■□□□ 1.23
PCSK4-203ENST00000586002 PAPPAQ13219 1627 aa22.74■■□□□ 1.23
PCSK4-203ENST00000586002 ZNF831Q5JPB2 1677 aa22.74■■□□□ 1.23
PCSK4-203ENST00000586002 GNPATO15228 680 aa22.73■■□□□ 1.23
PCSK4-203ENST00000586002 GIGYF1O75420 1035 aaPredicted RBP22.73■■□□□ 1.23
PCSK4-203ENST00000586002 INTS5Q6P9B9 1019 aaKnown RBP22.73■■□□□ 1.23
PCSK4-203ENST00000586002 CCDC87Q9NVE4 849 aa22.73■■□□□ 1.23
PCSK4-203ENST00000586002 RTCBQ9Y3I0 505 aaKnown RBP22.73■■□□□ 1.23
PCSK4-203ENST00000586002 USP16Q9Y5T5 823 aa22.73■■□□□ 1.23
PCSK4-203ENST00000586002 SSFA2P28290 1259 aa22.71■■□□□ 1.23
PCSK4-203ENST00000586002 MBIPQ9NS73 344 aa22.71■■□□□ 1.23
PCSK4-203ENST00000586002 PNPLA7Q6ZV29 1317 aa22.71■■□□□ 1.23
PCSK4-203ENST00000586002 TAF1LQ8IZX4 1826 aa22.71■■□□□ 1.23
PCSK4-203ENST00000586002 PRAMEF22A3QJZ6 481 aa22.7■■□□□ 1.22
PCSK4-203ENST00000586002 TRAPPC3LQ5T215 181 aa22.7■■□□□ 1.22
PCSK4-203ENST00000586002 COL23A1Q86Y22 540 aaPredicted RBP22.7■■□□□ 1.22
PCSK4-203ENST00000586002 C5P01031 1676 aa22.7■■□□□ 1.22
PCSK4-203ENST00000586002 UBR2Q8IWV8 1755 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms