RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 SMARCC1Q92922 1105 aaPredicted RBP15.43■□□□□ 0.06
LRFN3-202ENST00000585876 UBR3Q6ZT12 1888 aa15.43■□□□□ 0.06
LRFN3-202ENST00000585876 KCPQ6ZWJ8 1503 aa15.43■□□□□ 0.06
LRFN3-202ENST00000585876 WDR43Q15061 677 aaKnown RBP eCLIP15.42■□□□□ 0.06
LRFN3-202ENST00000585876 SLC52A2Q9HAB3 445 aa15.42■□□□□ 0.06
LRFN3-202ENST00000585876 HTATSF1O43719 755 aaKnown RBP15.41■□□□□ 0.06
LRFN3-202ENST00000585876 LGR6Q9HBX8 967 aa15.41■□□□□ 0.06
LRFN3-202ENST00000585876 MAPK8IP3Q9UPT6 1336 aa15.41■□□□□ 0.06
LRFN3-202ENST00000585876 COL24A1Q17RW2 1714 aa15.4■□□□□ 0.06
LRFN3-202ENST00000585876 NEFMP07197 916 aa15.4■□□□□ 0.06
LRFN3-202ENST00000585876 CABP4P57796 275 aa15.4■□□□□ 0.06
LRFN3-202ENST00000585876 NFE2L2Q16236 605 aa15.4■□□□□ 0.06
LRFN3-202ENST00000585876 CCDC184Q52MB2 194 aa15.4■□□□□ 0.06
LRFN3-202ENST00000585876 IL17REQ8NFR9 667 aa15.4■□□□□ 0.06
LRFN3-202ENST00000585876 ATG3Q9NT62 314 aa15.4■□□□□ 0.06
LRFN3-202ENST00000585876 LRRC4BQ9NT99 713 aa15.4■□□□□ 0.06
LRFN3-202ENST00000585876 ADAMTS8Q9UP79 889 aa15.4■□□□□ 0.06
LRFN3-202ENST00000585876 LRP5O75197 1615 aa15.39■□□□□ 0.05
LRFN3-202ENST00000585876 MYH14Q7Z406 1995 aaKnown RBP15.39■□□□□ 0.05
LRFN3-202ENST00000585876 NFATC2IPQ8NCF5 419 aa15.39■□□□□ 0.05
LRFN3-202ENST00000585876 ASAP1Q9ULH1 1129 aa15.39■□□□□ 0.05
LRFN3-202ENST00000585876 HMGB2P26583 209 aaKnown RBP15.38■□□□□ 0.05
LRFN3-202ENST00000585876 PNISRQ8TF01 805 aaKnown RBP15.38■□□□□ 0.05
LRFN3-202ENST00000585876 ANO8Q9HCE9 1232 aaPredicted RBP15.38■□□□□ 0.05
LRFN3-202ENST00000585876 CCNL1Q9UK58 526 aaPredicted RBP15.38■□□□□ 0.05
LRFN3-202ENST00000585876 LAMB4A4D0S4 1761 aa15.37■□□□□ 0.05
LRFN3-202ENST00000585876 RUNDC1Q96C34 613 aa15.37■□□□□ 0.05
LRFN3-202ENST00000585876 MRS2Q9HD23 443 aa15.37■□□□□ 0.05
LRFN3-202ENST00000585876 LOC102724428A0A0B4J2F2 783 aa15.36■□□□□ 0.05
LRFN3-202ENST00000585876 SIK1P57059 783 aa15.36■□□□□ 0.05
LRFN3-202ENST00000585876 NBPF14Q5TI25 921 aa15.36■□□□□ 0.05
LRFN3-202ENST00000585876 TMPOP42166 694 aaKnown RBP15.35■□□□□ 0.05
LRFN3-202ENST00000585876 TEFQ10587 303 aa15.35■□□□□ 0.05
LRFN3-202ENST00000585876 RTF1Q92541 710 aaKnown RBP15.35■□□□□ 0.05
LRFN3-202ENST00000585876 AKT1S1Q96B36 256 aa15.35■□□□□ 0.05
LRFN3-202ENST00000585876 C4AP0C0L4 1744 aa15.34■□□□□ 0.05
LRFN3-202ENST00000585876 SLC15A2Q16348 729 aa15.34■□□□□ 0.05
LRFN3-202ENST00000585876 SLC4A9Q96Q91 983 aa15.34■□□□□ 0.05
LRFN3-202ENST00000585876 LMOD3Q0VAK6 560 aa15.33■□□□□ 0.04
LRFN3-202ENST00000585876 ZNF827Q17R98 1081 aa15.33■□□□□ 0.04
LRFN3-202ENST00000585876 MCM10Q7L590 875 aa15.33■□□□□ 0.04
LRFN3-202ENST00000585876 CCDC146Q8IYE0 955 aa15.33■□□□□ 0.04
LRFN3-202ENST00000585876 STK32BQ9NY57 414 aa15.33■□□□□ 0.04
LRFN3-202ENST00000585876 KCNQ4P56696 695 aa15.32■□□□□ 0.04
LRFN3-202ENST00000585876 ITPK1Q13572 414 aa15.32■□□□□ 0.04
LRFN3-202ENST00000585876 R3HDM1Q15032 1099 aaKnown RBP15.32■□□□□ 0.04
LRFN3-202ENST00000585876 RIPK4P57078 832 aa15.31■□□□□ 0.04
LRFN3-202ENST00000585876 ZNF790Q6PG37 636 aa15.31■□□□□ 0.04
LRFN3-202ENST00000585876 VSIG10Q8N0Z9 540 aa15.31■□□□□ 0.04
LRFN3-202ENST00000585876 PSDA5PKW4 1024 aaPredicted RBP15.3■□□□□ 0.04
LRFN3-202ENST00000585876 CCER2I3L3R5 266 aa15.3■□□□□ 0.04
LRFN3-202ENST00000585876 ATP6V1AP38606 617 aa15.3■□□□□ 0.04
LRFN3-202ENST00000585876 DCTN1Q14203 1278 aa15.3■□□□□ 0.04
LRFN3-202ENST00000585876 NCBP3Q53F19 620 aaKnown RBP15.3■□□□□ 0.04
LRFN3-202ENST00000585876 LINC00116Q8NCU8 138 aa15.3■□□□□ 0.04
LRFN3-202ENST00000585876 CNTNAP4Q9C0A0 1308 aa15.3■□□□□ 0.04
LRFN3-202ENST00000585876 HEG1Q9ULI3 1381 aa15.29■□□□□ 0.04
LRFN3-202ENST00000585876 SLC39A6Q13433 755 aa15.29■□□□□ 0.04
LRFN3-202ENST00000585876 TRIM35Q9UPQ4 493 aa15.29■□□□□ 0.04
LRFN3-202ENST00000585876 PNPLA7Q6ZV29 1317 aa15.28■□□□□ 0.04
LRFN3-202ENST00000585876 BTBD11A6QL63 1104 aa15.28■□□□□ 0.04
LRFN3-202ENST00000585876 PTCD1O75127 700 aaKnown RBP15.28■□□□□ 0.04
LRFN3-202ENST00000585876 TAF7Q15545 349 aaPredicted RBP15.28■□□□□ 0.04
LRFN3-202ENST00000585876 DIEXFQ68CQ4 756 aaKnown RBP15.28■□□□□ 0.04
LRFN3-202ENST00000585876 TTC5Q8N0Z6 440 aa15.28■□□□□ 0.04
LRFN3-202ENST00000585876 RBM42Q9BTD8 480 aaKnown RBP15.28■□□□□ 0.04
LRFN3-202ENST00000585876 BABAM1Q9NWV8 329 aa15.28■□□□□ 0.04
LRFN3-202ENST00000585876 APAF1O14727 1248 aa15.27■□□□□ 0.04
LRFN3-202ENST00000585876 RC3H1Q5TC82 1133 aaKnown RBP15.27■□□□□ 0.04
LRFN3-202ENST00000585876 ZNF496Q96IT1 587 aaPredicted RBP15.27■□□□□ 0.04
LRFN3-202ENST00000585876 RRP7AQ9Y3A4 280 aaKnown RBP15.27■□□□□ 0.04
LRFN3-202ENST00000585876 FMNL2Q96PY5 1086 aa15.26■□□□□ 0.03
LRFN3-202ENST00000585876 THUMPD2Q9BTF0 503 aaKnown RBP15.26■□□□□ 0.03
LRFN3-202ENST00000585876 SCN7AQ01118 1682 aa15.25■□□□□ 0.03
LRFN3-202ENST00000585876 SSFA2P28290 1259 aa15.25■□□□□ 0.03
LRFN3-202ENST00000585876 CCDC27Q2M243 656 aa15.25■□□□□ 0.03
LRFN3-202ENST00000585876 FLAD1Q8NFF5 587 aa15.25■□□□□ 0.03
LRFN3-202ENST00000585876 AK7Q96M32 723 aa15.25■□□□□ 0.03
LRFN3-202ENST00000585876 TFCP2L1Q9NZI6 479 aa15.25■□□□□ 0.03
LRFN3-202ENST00000585876 BCORQ6W2J9 1755 aa15.24■□□□□ 0.03
LRFN3-202ENST00000585876 PDGFDQ9GZP0 370 aaPredicted RBP15.24■□□□□ 0.03
LRFN3-202ENST00000585876 KCNQ3O43525 872 aa15.23■□□□□ 0.03
LRFN3-202ENST00000585876 CYP19A1P11511 503 aaPredicted RBP15.23■□□□□ 0.03
LRFN3-202ENST00000585876 ADRA2BP18089 450 aa15.23■□□□□ 0.03
LRFN3-202ENST00000585876 CRKLP46109 303 aaKnown RBP15.23■□□□□ 0.03
LRFN3-202ENST00000585876 NEUROD2Q15784 382 aa15.23■□□□□ 0.03
LRFN3-202ENST00000585876 AMIGO3Q86WK7 504 aa15.23■□□□□ 0.03
LRFN3-202ENST00000585876 DNAJC10Q8IXB1 793 aa15.23■□□□□ 0.03
LRFN3-202ENST00000585876 NGEFQ8N5V2 710 aa15.23■□□□□ 0.03
LRFN3-202ENST00000585876 SLC16A10Q8TF71 515 aa15.23■□□□□ 0.03
LRFN3-202ENST00000585876 TEX13AQ9BXU3 409 aaPredicted RBP15.23■□□□□ 0.03
LRFN3-202ENST00000585876 GNPATO15228 680 aa15.22■□□□□ 0.03
LRFN3-202ENST00000585876 INTS5Q6P9B9 1019 aaKnown RBP15.22■□□□□ 0.03
LRFN3-202ENST00000585876 CHL1O00533 1208 aa15.21■□□□□ 0.03
LRFN3-202ENST00000585876 RPS6KA4O75676 772 aa15.21■□□□□ 0.03
LRFN3-202ENST00000585876 CALD1Q05682 793 aaKnown RBP15.21■□□□□ 0.03
LRFN3-202ENST00000585876 COL23A1Q86Y22 540 aaPredicted RBP15.21■□□□□ 0.03
LRFN3-202ENST00000585876 MTFR1LQ9H019 292 aa15.21■□□□□ 0.03
LRFN3-202ENST00000585876 CCDC87Q9NVE4 849 aa15.21■□□□□ 0.03
LRFN3-202ENST00000585876 SOS1Q07889 1333 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms