RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 TMC1Q8TDI8 760 aa12.92□□□□□ -0.34
SDF2-203ENST00000585749 KLRG1Q96E93 195 aa12.92□□□□□ -0.34
SDF2-203ENST00000585749 KIF13BQ9NQT8 1826 aa12.92□□□□□ -0.34
SDF2-203ENST00000585749 HAX1O00165 279 aa12.91□□□□□ -0.34
SDF2-203ENST00000585749 PRELPP51888 382 aa12.91□□□□□ -0.34
SDF2-203ENST00000585749 HTRA3P83110 453 aa12.91□□□□□ -0.34
SDF2-203ENST00000585749 SLC12A5Q9H2X9 1139 aa12.91□□□□□ -0.34
SDF2-203ENST00000585749 NMRK2Q9NPI5 230 aa12.91□□□□□ -0.34
SDF2-203ENST00000585749 TERF2IPQ9NYB0 399 aa12.91□□□□□ -0.34
SDF2-203ENST00000585749 FARP1Q9Y4F1 1045 aaPredicted RBP12.91□□□□□ -0.34
SDF2-203ENST00000585749 PXDNLA1KZ92 1463 aa12.91□□□□□ -0.34
SDF2-203ENST00000585749 N4BP2Q86UW6 1770 aaPredicted RBP12.9□□□□□ -0.34
SDF2-203ENST00000585749 HMGB2P26583 209 aaKnown RBP12.9□□□□□ -0.34
SDF2-203ENST00000585749 HOXC9P31274 260 aa12.9□□□□□ -0.34
SDF2-203ENST00000585749 SMIM5Q71RC9 77 aa12.9□□□□□ -0.34
SDF2-203ENST00000585749 AK7Q96M32 723 aa12.9□□□□□ -0.34
SDF2-203ENST00000585749 MAP3K19Q56UN5 1328 aa12.89□□□□□ -0.35
SDF2-203ENST00000585749 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.89□□□□□ -0.35
SDF2-203ENST00000585749 PHF14O94880 888 aa12.89□□□□□ -0.35
SDF2-203ENST00000585749 CDCA8Q53HL2 280 aa12.89□□□□□ -0.35
SDF2-203ENST00000585749 TNS4Q8IZW8 715 aa12.89□□□□□ -0.35
SDF2-203ENST00000585749 RBM46Q8TBY0 533 aaKnown RBP12.89□□□□□ -0.35
SDF2-203ENST00000585749 ITGB4P16144 1822 aa12.89□□□□□ -0.35
SDF2-203ENST00000585749 CGNL1Q0VF96 1302 aa12.88□□□□□ -0.35
SDF2-203ENST00000585749 NSD3Q9BZ95 1437 aa12.88□□□□□ -0.35
SDF2-203ENST00000585749 MAP2P11137 1827 aaKnown RBP12.88□□□□□ -0.35
SDF2-203ENST00000585749 BRCA1P38398 1863 aaKnown RBP12.87□□□□□ -0.35
SDF2-203ENST00000585749 SSFA2P28290 1259 aa12.87□□□□□ -0.35
SDF2-203ENST00000585749 MPRIPQ6WCQ1 1025 aa12.87□□□□□ -0.35
SDF2-203ENST00000585749 FBLN1P23142 703 aa12.86□□□□□ -0.35
SDF2-203ENST00000585749 NBPF6Q5VWK0 638 aa12.86□□□□□ -0.35
SDF2-203ENST00000585749 USHBP1Q8N6Y0 703 aa12.86□□□□□ -0.35
SDF2-203ENST00000585749 NBPF4Q96M43 638 aa12.86□□□□□ -0.35
SDF2-203ENST00000585749 PCDH11XQ9BZA7 1347 aa12.86□□□□□ -0.35
SDF2-203ENST00000585749 PCDH11YQ9BZA8 1340 aa12.86□□□□□ -0.35
SDF2-203ENST00000585749 PKD1L3Q7Z443 1732 aa12.85□□□□□ -0.35
SDF2-203ENST00000585749 RTL1A6NKG5 1358 aa12.85□□□□□ -0.35
SDF2-203ENST00000585749 AMPHP49418 695 aa12.85□□□□□ -0.35
SDF2-203ENST00000585749 FSTL1Q12841 308 aa12.85□□□□□ -0.35
SDF2-203ENST00000585749 BCS1LQ9Y276 419 aa12.85□□□□□ -0.35
SDF2-203ENST00000585749 TGFB2P61812 414 aa12.84□□□□□ -0.35
SDF2-203ENST00000585749 EIF4G2P78344 907 aaKnown RBP eCLIP12.84□□□□□ -0.35
SDF2-203ENST00000585749 EVX2Q03828 476 aa12.84□□□□□ -0.35
SDF2-203ENST00000585749 MIER1Q8N108 512 aa12.84□□□□□ -0.35
SDF2-203ENST00000585749 LINC00116Q8NCU8 138 aa12.84□□□□□ -0.35
SDF2-203ENST00000585749 RAPGEF4Q8WZA2 1011 aa12.84□□□□□ -0.35
SDF2-203ENST00000585749 SMARCC1Q92922 1105 aaPredicted RBP12.84□□□□□ -0.35
SDF2-203ENST00000585749 C10orf71Q711Q0 1435 aa12.84□□□□□ -0.35
SDF2-203ENST00000585749 KIF20BQ96Q89 1820 aa12.83□□□□□ -0.35
SDF2-203ENST00000585749 ARFGEF1Q9Y6D6 1849 aa12.83□□□□□ -0.35
SDF2-203ENST00000585749 PLEKHG2Q9H7P9 1386 aa12.83□□□□□ -0.36
SDF2-203ENST00000585749 MMP10P09238 476 aa12.83□□□□□ -0.36
SDF2-203ENST00000585749 MNX1P50219 401 aaPredicted RBP12.83□□□□□ -0.36
SDF2-203ENST00000585749 ARHGAP27Q6ZUM4 889 aa12.83□□□□□ -0.36
SDF2-203ENST00000585749 C16orf71Q8IYS4 520 aaPredicted RBP12.83□□□□□ -0.36
SDF2-203ENST00000585749 COG3Q96JB2 828 aa12.83□□□□□ -0.36
SDF2-203ENST00000585749 KCPQ6ZWJ8 1503 aa12.83□□□□□ -0.36
SDF2-203ENST00000585749 A0A0G2JLW4 131 aa12.82□□□□□ -0.36
SDF2-203ENST00000585749 CYP27B1O15528 508 aa12.82□□□□□ -0.36
SDF2-203ENST00000585749 TATP17735 454 aaPredicted RBP12.82□□□□□ -0.36
SDF2-203ENST00000585749 FBXO3Q9UK99 471 aa12.82□□□□□ -0.36
SDF2-203ENST00000585749 TNRC6CQ9HCJ0 1690 aaKnown RBP12.82□□□□□ -0.36
SDF2-203ENST00000585749 SMG6Q86US8 1419 aaKnown RBP12.81□□□□□ -0.36
SDF2-203ENST00000585749 LOC102724428A0A0B4J2F2 783 aa12.81□□□□□ -0.36
SDF2-203ENST00000585749 C19orf67A6NJJ6 358 aa12.81□□□□□ -0.36
SDF2-203ENST00000585749 GNPATO15228 680 aa12.81□□□□□ -0.36
SDF2-203ENST00000585749 HSPA5P11021 654 aaKnown RBP12.81□□□□□ -0.36
SDF2-203ENST00000585749 SIK1P57059 783 aa12.81□□□□□ -0.36
SDF2-203ENST00000585749 C9orf131Q5VYM1 1079 aa12.81□□□□□ -0.36
SDF2-203ENST00000585749 PIGBQ92521 554 aa12.81□□□□□ -0.36
SDF2-203ENST00000585749 C4AP0C0L4 1744 aa12.8□□□□□ -0.36
SDF2-203ENST00000585749 FCHSD2O94868 740 aa12.8□□□□□ -0.36
SDF2-203ENST00000585749 RRS1Q15050 365 aaKnown RBP12.8□□□□□ -0.36
SDF2-203ENST00000585749 DPEP1P16444 411 aa12.79□□□□□ -0.36
SDF2-203ENST00000585749 ITPK1Q13572 414 aa12.79□□□□□ -0.36
SDF2-203ENST00000585749 KDM2BQ8NHM5 1336 aa12.79□□□□□ -0.36
SDF2-203ENST00000585749 HSPA1AP0DMV8 641 aaKnown RBP12.78□□□□□ -0.36
SDF2-203ENST00000585749 HSPA1BP0DMV9 641 aaKnown RBP12.78□□□□□ -0.36
SDF2-203ENST00000585749 SBF1O95248 1867 aa12.77□□□□□ -0.37
SDF2-203ENST00000585749 KCNA3P22001 575 aa12.77□□□□□ -0.37
SDF2-203ENST00000585749 NKX1-1Q15270 411 aaPredicted RBP12.77□□□□□ -0.37
SDF2-203ENST00000585749 SMC1BQ8NDV3 1235 aa12.77□□□□□ -0.37
SDF2-203ENST00000585749 RRAGCQ9HB90 399 aa12.77□□□□□ -0.37
SDF2-203ENST00000585749 INSRP06213 1382 aa12.77□□□□□ -0.37
SDF2-203ENST00000585749 FYB1O15117 783 aa12.76□□□□□ -0.37
SDF2-203ENST00000585749 SLC34A2O95436 690 aa12.76□□□□□ -0.37
SDF2-203ENST00000585749 ATP6V1AP38606 617 aa12.76□□□□□ -0.37
SDF2-203ENST00000585749 HSP90AB2PQ58FF8 381 aa12.76□□□□□ -0.37
SDF2-203ENST00000585749 NLGN1Q8N2Q7 840 aa12.76□□□□□ -0.37
SDF2-203ENST00000585749 PLCD3Q8N3E9 789 aa12.76□□□□□ -0.37
SDF2-203ENST00000585749 CCDC87Q9NVE4 849 aa12.76□□□□□ -0.37
SDF2-203ENST00000585749 ASAP1Q9ULH1 1129 aa12.76□□□□□ -0.37
SDF2-203ENST00000585749 ANKRD26Q9UPS8 1709 aa12.76□□□□□ -0.37
SDF2-203ENST00000585749 NCAPD2Q15021 1401 aa12.75□□□□□ -0.37
SDF2-203ENST00000585749 DCAF5Q96JK2 942 aa12.75□□□□□ -0.37
SDF2-203ENST00000585749 CARD14Q9BXL6 1004 aa12.75□□□□□ -0.37
SDF2-203ENST00000585749 RNF181Q9P0P0 153 aa12.75□□□□□ -0.37
SDF2-203ENST00000585749 COL5A3P25940 1745 aaPredicted RBP12.74□□□□□ -0.37
SDF2-203ENST00000585749 ZNF831Q5JPB2 1677 aa12.74□□□□□ -0.37
SDF2-203ENST00000585749 FLT4P35916 1363 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms