RNA–Protein interactions for RNA: ENST00000584842.1

CTC1-213, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-213ENST00000584842 ZNF827Q17R98 1081 aa10.63□□□□□ -0.71
CTC1-213ENST00000584842 MTHFSDQ2M296 383 aaKnown RBP10.63□□□□□ -0.71
CTC1-213ENST00000584842 AK7Q96M32 723 aa10.63□□□□□ -0.71
CTC1-213ENST00000584842 RSPH6AQ9H0K4 717 aa10.63□□□□□ -0.71
CTC1-213ENST00000584842 PPP1R1BQ9UD71 204 aaPredicted RBP10.63□□□□□ -0.71
CTC1-213ENST00000584842 COL5A3P25940 1745 aaPredicted RBP10.63□□□□□ -0.71
CTC1-213ENST00000584842 UBR3Q6ZT12 1888 aa10.63□□□□□ -0.71
CTC1-213ENST00000584842 DLG5Q8TDM6 1919 aa10.62□□□□□ -0.71
CTC1-213ENST00000584842 SIPA1L3O60292 1781 aaPredicted RBP10.62□□□□□ -0.71
CTC1-213ENST00000584842 CICQ96RK0 1608 aaPredicted RBP10.62□□□□□ -0.71
CTC1-213ENST00000584842 GNAT3A8MTJ3 354 aa10.62□□□□□ -0.71
CTC1-213ENST00000584842 KCNQ4P56696 695 aa10.62□□□□□ -0.71
CTC1-213ENST00000584842 AKT1S1Q96B36 256 aa10.62□□□□□ -0.71
CTC1-213ENST00000584842 ASAP1Q9ULH1 1129 aa10.62□□□□□ -0.71
CTC1-213ENST00000584842 MAPK8IP3Q9UPT6 1336 aa10.61□□□□□ -0.71
CTC1-213ENST00000584842 RNMTO43148 476 aaKnown RBP10.61□□□□□ -0.71
CTC1-213ENST00000584842 MSH5O43196 834 aa10.61□□□□□ -0.71
CTC1-213ENST00000584842 ATP6V1AP38606 617 aa10.61□□□□□ -0.71
CTC1-213ENST00000584842 TEFQ10587 303 aa10.61□□□□□ -0.71
CTC1-213ENST00000584842 NFATC2IPQ8NCF5 419 aa10.61□□□□□ -0.71
CTC1-213ENST00000584842 FLAD1Q8NFF5 587 aa10.61□□□□□ -0.71
CTC1-213ENST00000584842 RTF1Q92541 710 aaKnown RBP10.61□□□□□ -0.71
CTC1-213ENST00000584842 RBM42Q9BTD8 480 aaKnown RBP10.61□□□□□ -0.71
CTC1-213ENST00000584842 MTFR1LQ9H019 292 aa10.61□□□□□ -0.71
CTC1-213ENST00000584842 SLC52A2Q9HAB3 445 aa10.61□□□□□ -0.71
CTC1-213ENST00000584842 ATG3Q9NT62 314 aa10.61□□□□□ -0.71
CTC1-213ENST00000584842 UBR2Q8IWV8 1755 aa10.61□□□□□ -0.71
CTC1-213ENST00000584842 ZBTB7AO95365 584 aa10.6□□□□□ -0.71
CTC1-213ENST00000584842 SLC16A10Q8TF71 515 aa10.6□□□□□ -0.71
CTC1-213ENST00000584842 TJP1Q07157 1748 aa10.6□□□□□ -0.71
CTC1-213ENST00000584842 WDR43Q15061 677 aaKnown RBP eCLIP10.59□□□□□ -0.71
CTC1-213ENST00000584842 TTC5Q8N0Z6 440 aa10.59□□□□□ -0.71
CTC1-213ENST00000584842 PNPLA7Q6ZV29 1317 aa10.58□□□□□ -0.71
CTC1-213ENST00000584842 COL24A1Q17RW2 1714 aa10.58□□□□□ -0.72
CTC1-213ENST00000584842 PTCD1O75127 700 aaKnown RBP10.58□□□□□ -0.72
CTC1-213ENST00000584842 POLD1P28340 1107 aa10.58□□□□□ -0.72
CTC1-213ENST00000584842 PHACTR3Q96KR7 559 aa10.58□□□□□ -0.72
CTC1-213ENST00000584842 PRKRIP1Q9H875 184 aaPredicted RBP10.58□□□□□ -0.72
CTC1-213ENST00000584842 LGR6Q9HBX8 967 aa10.58□□□□□ -0.72
CTC1-213ENST00000584842 GNPATO15228 680 aa10.57□□□□□ -0.72
CTC1-213ENST00000584842 HTATSF1O43719 755 aaKnown RBP10.57□□□□□ -0.72
CTC1-213ENST00000584842 SSFA2P28290 1259 aa10.57□□□□□ -0.72
CTC1-213ENST00000584842 LINC00116Q8NCU8 138 aa10.57□□□□□ -0.72
CTC1-213ENST00000584842 PDGFDQ9GZP0 370 aaPredicted RBP10.57□□□□□ -0.72
CTC1-213ENST00000584842 ATF5Q9Y2D1 282 aaPredicted RBP10.57□□□□□ -0.72
CTC1-213ENST00000584842 KCPQ6ZWJ8 1503 aa10.57□□□□□ -0.72
CTC1-213ENST00000584842 CNTNAP4Q9C0A0 1308 aa10.57□□□□□ -0.72
CTC1-213ENST00000584842 C4AP0C0L4 1744 aa10.56□□□□□ -0.72
CTC1-213ENST00000584842 CEMIPQ8WUJ3 1361 aa10.56□□□□□ -0.72
CTC1-213ENST00000584842 PHF14O94880 888 aa10.56□□□□□ -0.72
CTC1-213ENST00000584842 ITPK1Q13572 414 aa10.56□□□□□ -0.72
CTC1-213ENST00000584842 MYH14Q7Z406 1995 aaKnown RBP10.56□□□□□ -0.72
CTC1-213ENST00000584842 SRCAPQ6ZRS2 3230 aa10.55□□□□□ -0.72
CTC1-213ENST00000584842 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.55□□□□□ -0.72
CTC1-213ENST00000584842 ANP32CO43423 234 aa10.55□□□□□ -0.72
CTC1-213ENST00000584842 ADRA2BP18089 450 aa10.55□□□□□ -0.72
CTC1-213ENST00000584842 RTCBQ9Y3I0 505 aaKnown RBP10.55□□□□□ -0.72
CTC1-213ENST00000584842 DCAF8L1A6NGE4 600 aa10.54□□□□□ -0.72
CTC1-213ENST00000584842 BTBD11A6QL63 1104 aa10.54□□□□□ -0.72
CTC1-213ENST00000584842 LMOD3Q0VAK6 560 aa10.54□□□□□ -0.72
CTC1-213ENST00000584842 SLC39A6Q13433 755 aa10.54□□□□□ -0.72
CTC1-213ENST00000584842 NFE2L2Q16236 605 aa10.54□□□□□ -0.72
CTC1-213ENST00000584842 RC3H1Q5TC82 1133 aaKnown RBP10.54□□□□□ -0.72
CTC1-213ENST00000584842 COL23A1Q86Y22 540 aaPredicted RBP10.54□□□□□ -0.72
CTC1-213ENST00000584842 VSIG10Q8N0Z9 540 aa10.54□□□□□ -0.72
CTC1-213ENST00000584842 IL17REQ8NFR9 667 aa10.54□□□□□ -0.72
CTC1-213ENST00000584842 ARXQ96QS3 562 aa10.54□□□□□ -0.72
CTC1-213ENST00000584842 RTN4Q9NQC3 1192 aaKnown RBP10.54□□□□□ -0.72
CTC1-213ENST00000584842 LAMB4A4D0S4 1761 aa10.53□□□□□ -0.72
CTC1-213ENST00000584842 KDM3BQ7LBC6 1761 aa10.53□□□□□ -0.72
CTC1-213ENST00000584842 PTGER2P43116 358 aa10.53□□□□□ -0.72
CTC1-213ENST00000584842 CRKLP46109 303 aaKnown RBP10.53□□□□□ -0.72
CTC1-213ENST00000584842 ZNF790Q6PG37 636 aa10.53□□□□□ -0.72
CTC1-213ENST00000584842 MCM10Q7L590 875 aa10.53□□□□□ -0.72
CTC1-213ENST00000584842 FMNL2Q96PY5 1086 aa10.53□□□□□ -0.72
CTC1-213ENST00000584842 PLEKHF1Q96S99 279 aa10.53□□□□□ -0.72
CTC1-213ENST00000584842 STARD3NLO95772 234 aa10.52□□□□□ -0.73
CTC1-213ENST00000584842 RFC4P35249 363 aa10.52□□□□□ -0.73
CTC1-213ENST00000584842 TRAPPC3LQ5T215 181 aa10.52□□□□□ -0.73
CTC1-213ENST00000584842 MSL1Q68DK7 614 aa10.52□□□□□ -0.73
CTC1-213ENST00000584842 PNISRQ8TF01 805 aaKnown RBP10.52□□□□□ -0.73
CTC1-213ENST00000584842 SLC4A9Q96Q91 983 aa10.52□□□□□ -0.73
CTC1-213ENST00000584842 TEX13AQ9BXU3 409 aaPredicted RBP10.52□□□□□ -0.73
CTC1-213ENST00000584842 HEG1Q9ULI3 1381 aa10.52□□□□□ -0.73
CTC1-213ENST00000584842 RPS6KA4O75676 772 aa10.51□□□□□ -0.73
CTC1-213ENST00000584842 NPM2Q86SE8 214 aaKnown RBP10.51□□□□□ -0.73
CTC1-213ENST00000584842 DNAJC10Q8IXB1 793 aa10.51□□□□□ -0.73
CTC1-213ENST00000584842 KLHL34Q8N239 644 aa10.51□□□□□ -0.73
CTC1-213ENST00000584842 RUNDC1Q96C34 613 aa10.51□□□□□ -0.73
CTC1-213ENST00000584842 SGIP1Q9BQI5 828 aa10.51□□□□□ -0.73
CTC1-213ENST00000584842 CCDC87Q9NVE4 849 aa10.51□□□□□ -0.73
CTC1-213ENST00000584842 RIPK4P57078 832 aa10.5□□□□□ -0.73
CTC1-213ENST00000584842 DCTN1Q14203 1278 aa10.5□□□□□ -0.73
CTC1-213ENST00000584842 TAF7Q15545 349 aaPredicted RBP10.5□□□□□ -0.73
CTC1-213ENST00000584842 CCDC146Q8IYE0 955 aa10.5□□□□□ -0.73
CTC1-213ENST00000584842 CYP19A1P11511 503 aaPredicted RBP10.49□□□□□ -0.73
CTC1-213ENST00000584842 KCNA4P22459 653 aa10.49□□□□□ -0.73
CTC1-213ENST00000584842 AMIGO3Q86WK7 504 aa10.49□□□□□ -0.73
CTC1-213ENST00000584842 ZNF496Q96IT1 587 aaPredicted RBP10.49□□□□□ -0.73
CTC1-213ENST00000584842 FHDC1Q9C0D6 1143 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms